RNA–Protein interactions for RNA: ENST00000369983.3

GBF1-201, Transcript of golgi brefeldin A resistant guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBF1, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1-201ENST00000369983 PRM3Q9NNZ6 103 aa16.88■□□□□ 0.29
GBF1-201ENST00000369983 L1TD1Q5T7N2 865 aaKnown RBP16.87■□□□□ 0.29
GBF1-201ENST00000369983 PDS5BQ9NTI5 1447 aa16.86■□□□□ 0.29
GBF1-201ENST00000369983 CEP162Q5TB80 1403 aa16.86■□□□□ 0.29
GBF1-201ENST00000369983 CFAP44Q96MT7 982 aa16.85■□□□□ 0.29
GBF1-201ENST00000369983 KIAA2012Q0VF49 1180 aa16.84■□□□□ 0.29
GBF1-201ENST00000369983 TAF7LQ5H9L4 462 aa16.84■□□□□ 0.29
GBF1-201ENST00000369983 DCAF11Q8TEB1 546 aa16.83■□□□□ 0.28
GBF1-201ENST00000369983 GORABQ5T7V8 394 aa16.82■□□□□ 0.28
GBF1-201ENST00000369983 SENP3-EIF4A1A0A087X0R7 540 aa16.81■□□□□ 0.28
GBF1-201ENST00000369983 CALD1Q05682 793 aaKnown RBP16.81■□□□□ 0.28
GBF1-201ENST00000369983 MEX3CQ5U5Q3 659 aaKnown RBP16.81■□□□□ 0.28
GBF1-201ENST00000369983 EFCAB2Q5VUJ9 269 aa16.81■□□□□ 0.28
GBF1-201ENST00000369983 DCAF8L1A6NGE4 600 aa16.81■□□□□ 0.28
GBF1-201ENST00000369983 CHAF1AQ13111 956 aaPredicted RBP16.81■□□□□ 0.28
GBF1-201ENST00000369983 CARMIL1Q5VZK9 1371 aa16.79■□□□□ 0.28
GBF1-201ENST00000369983 BAZ1AQ9NRL2 1556 aaPredicted RBP16.79■□□□□ 0.28
GBF1-201ENST00000369983 KIAA1211Q6ZU35 1233 aa16.79■□□□□ 0.28
GBF1-201ENST00000369983 KRI1Q8N9T8 703 aaKnown RBP16.78■□□□□ 0.28
GBF1-201ENST00000369983 GTF2E1P29083 439 aaPredicted RBP16.78■□□□□ 0.28
GBF1-201ENST00000369983 CUX2O14529 1486 aa16.78■□□□□ 0.28
GBF1-201ENST00000369983 CHMP3Q9Y3E7 222 aa16.78■□□□□ 0.28
GBF1-201ENST00000369983 RGS3P49796 1198 aa16.77■□□□□ 0.28
GBF1-201ENST00000369983 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.27
GBF1-201ENST00000369983 SPAG9O60271 1321 aaKnown RBP16.76■□□□□ 0.27
GBF1-201ENST00000369983 MSH5O43196 834 aa16.76■□□□□ 0.27
GBF1-201ENST00000369983 HDAC5Q9UQL6 1122 aa16.75■□□□□ 0.27
GBF1-201ENST00000369983 NGDNQ8NEJ9 315 aaKnown RBP16.73■□□□□ 0.27
GBF1-201ENST00000369983 IPO8O15397 1037 aaKnown RBP16.73■□□□□ 0.27
GBF1-201ENST00000369983 HSCBQ8IWL3 235 aa16.73■□□□□ 0.27
GBF1-201ENST00000369983 EIF3AQ14152 1382 aaKnown RBP16.72■□□□□ 0.27
GBF1-201ENST00000369983 FRAT2O75474 233 aaPredicted RBP16.72■□□□□ 0.27
GBF1-201ENST00000369983 GPATCH3Q96I76 525 aa16.72■□□□□ 0.27
GBF1-201ENST00000369983 STK31Q9BXU1 1019 aa16.71■□□□□ 0.27
GBF1-201ENST00000369983 EVA1CP58658 441 aa16.71■□□□□ 0.26
GBF1-201ENST00000369983 DRC7Q8IY82 874 aa16.7■□□□□ 0.26
GBF1-201ENST00000369983 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.7■□□□□ 0.26
GBF1-201ENST00000369983 PHF23Q9BUL5 403 aaPredicted RBP16.69■□□□□ 0.26
GBF1-201ENST00000369983 VPS53Q5VIR6 699 aa16.68■□□□□ 0.26
GBF1-201ENST00000369983 NOC3LQ8WTT2 800 aaKnown RBP16.68■□□□□ 0.26
GBF1-201ENST00000369983 APBB1O00213 710 aa16.67■□□□□ 0.26
GBF1-201ENST00000369983 HTATSF1O43719 755 aaKnown RBP16.67■□□□□ 0.26
GBF1-201ENST00000369983 AMPHP49418 695 aa16.66■□□□□ 0.26
GBF1-201ENST00000369983 CCDC34Q96HJ3 373 aa16.66■□□□□ 0.26
GBF1-201ENST00000369983 ARHGAP35Q9NRY4 1499 aa16.66■□□□□ 0.26
GBF1-201ENST00000369983 TERF2IPQ9NYB0 399 aa16.65■□□□□ 0.26
GBF1-201ENST00000369983 MIER1Q8N108 512 aa16.65■□□□□ 0.26
GBF1-201ENST00000369983 CTDP1Q9Y5B0 961 aaPredicted RBP16.64■□□□□ 0.25
GBF1-201ENST00000369983 MARCH6O60337 910 aa16.64■□□□□ 0.25
GBF1-201ENST00000369983 ANKRD30AQ9BXX3 1397 aa16.64■□□□□ 0.25
GBF1-201ENST00000369983 RASSF8Q8NHQ8 419 aa16.64■□□□□ 0.25
GBF1-201ENST00000369983 U2AF1L5P0DN76 240 aaPredicted RBP16.63■□□□□ 0.25
GBF1-201ENST00000369983 U2AF1Q01081 240 aaKnown RBP eCLIP16.63■□□□□ 0.25
GBF1-201ENST00000369983 TRIM34Q9BYJ4 488 aa16.63■□□□□ 0.25
GBF1-201ENST00000369983 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
GBF1-201ENST00000369983 SOGA1O94964 1423 aa16.62■□□□□ 0.25
GBF1-201ENST00000369983 HSP90B1P14625 803 aaKnown RBP16.62■□□□□ 0.25
GBF1-201ENST00000369983 KTN1Q86UP2 1357 aaKnown RBP16.62■□□□□ 0.25
GBF1-201ENST00000369983 WASHC2CQ9Y4E1 1318 aa16.61■□□□□ 0.25
GBF1-201ENST00000369983 RSPH4AQ5TD94 716 aa16.61■□□□□ 0.25
GBF1-201ENST00000369983 CWC22Q9HCG8 908 aaKnown RBP16.61■□□□□ 0.25
GBF1-201ENST00000369983 PKD2Q13563 968 aa16.61■□□□□ 0.25
GBF1-201ENST00000369983 SUPT16HQ9Y5B9 1047 aaKnown RBP16.61■□□□□ 0.25
GBF1-201ENST00000369983 KIF3BO15066 747 aa16.61■□□□□ 0.25
GBF1-201ENST00000369983 TPM4P67936 248 aa16.61■□□□□ 0.25
GBF1-201ENST00000369983 TIMELESSQ9UNS1 1208 aa16.6■□□□□ 0.25
GBF1-201ENST00000369983 LTV1Q96GA3 475 aaPredicted RBP16.6■□□□□ 0.25
GBF1-201ENST00000369983 KLHL34Q8N239 644 aa16.59■□□□□ 0.25
GBF1-201ENST00000369983 TOMM22Q9NS69 142 aa16.59■□□□□ 0.25
GBF1-201ENST00000369983 FMN1Q68DA7 1419 aa16.59■□□□□ 0.25
GBF1-201ENST00000369983 CEP89Q96ST8 783 aa16.58■□□□□ 0.25
GBF1-201ENST00000369983 NOL10Q9BSC4 688 aaKnown RBP16.58■□□□□ 0.25
GBF1-201ENST00000369983 LMOD3Q0VAK6 560 aa16.58■□□□□ 0.24
GBF1-201ENST00000369983 ROCK2O75116 1388 aaKnown RBP16.57■□□□□ 0.24
GBF1-201ENST00000369983 CECR2Q9BXF3 1484 aa16.57■□□□□ 0.24
GBF1-201ENST00000369983 TCEAL9Q9UHQ7 104 aa16.57■□□□□ 0.24
GBF1-201ENST00000369983 SIN3AQ96ST3 1273 aa16.57■□□□□ 0.24
GBF1-201ENST00000369983 ITPRIPQ8IWB1 547 aa16.57■□□□□ 0.24
GBF1-201ENST00000369983 HMMRO75330 724 aa16.56■□□□□ 0.24
GBF1-201ENST00000369983 AMOTL1Q8IY63 956 aa16.56■□□□□ 0.24
GBF1-201ENST00000369983 C1orf141Q5JVX7 400 aa16.55■□□□□ 0.24
GBF1-201ENST00000369983 PPP4R2Q9NY27 417 aa16.55■□□□□ 0.24
GBF1-201ENST00000369983 NUP155O75694 1391 aa16.55■□□□□ 0.24
GBF1-201ENST00000369983 PDE4CQ08493 712 aa16.54■□□□□ 0.24
GBF1-201ENST00000369983 ERICH6BQ5W0A0 696 aa16.54■□□□□ 0.24
GBF1-201ENST00000369983 CNKSR2Q8WXI2 1034 aa16.54■□□□□ 0.24
GBF1-201ENST00000369983 TRIM6-TRIM34B2RNG4 842 aa16.52■□□□□ 0.24
GBF1-201ENST00000369983 NUTM2DQ5VT03 806 aaPredicted RBP16.52■□□□□ 0.24
GBF1-201ENST00000369983 NAP1L5Q96NT1 182 aaPredicted RBP16.52■□□□□ 0.24
GBF1-201ENST00000369983 NUTM2FA1L443 756 aa16.51■□□□□ 0.23
GBF1-201ENST00000369983 SLC4A10Q6U841 1118 aa16.51■□□□□ 0.23
GBF1-201ENST00000369983 RWDD1Q9H446 243 aaPredicted RBP16.5■□□□□ 0.23
GBF1-201ENST00000369983 A0A0U1RQG5 324 aaPredicted RBP16.5■□□□□ 0.23
GBF1-201ENST00000369983 PTMSP20962 102 aa16.5■□□□□ 0.23
GBF1-201ENST00000369983 SETD5Q9C0A6 1442 aa16.5■□□□□ 0.23
GBF1-201ENST00000369983 MSNP26038 577 aaKnown RBP16.49■□□□□ 0.23
GBF1-201ENST00000369983 FBXW7Q969H0 707 aa16.49■□□□□ 0.23
GBF1-201ENST00000369983 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.48■□□□□ 0.23
GBF1-201ENST00000369983 UACAQ9BZF9 1416 aa16.48■□□□□ 0.23
GBF1-201ENST00000369983 TTC5Q8N0Z6 440 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms