RNA–Protein interactions for RNA: ENST00000369968.6

CLCC1-204, Transcript of chloride channel CLIC like 1, humanhuman

TSL 5 BASIC

Gene CLCC1, Length 4,151 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-204ENST00000369968 EIF5BO60841 1220 aaKnown RBP8.56□□□□□ -1.04
CLCC1-204ENST00000369968 NEFMP07197 916 aa8.56□□□□□ -1.04
CLCC1-204ENST00000369968 SKAP1Q86WV1 359 aa8.56□□□□□ -1.04
CLCC1-204ENST00000369968 LAS1LQ9Y4W2 734 aaKnown RBP8.56□□□□□ -1.04
CLCC1-204ENST00000369968 FAM50AQ14320 339 aaKnown RBP8.55□□□□□ -1.04
CLCC1-204ENST00000369968 ZBTB47Q9UFB7 747 aaPredicted RBP8.55□□□□□ -1.04
CLCC1-204ENST00000369968 CADPSQ9ULU8 1353 aa8.55□□□□□ -1.04
CLCC1-204ENST00000369968 NPM1P06748 294 aaKnown RBP eCLIP8.54□□□□□ -1.04
CLCC1-204ENST00000369968 NFKBIBQ15653 356 aa8.54□□□□□ -1.04
CLCC1-204ENST00000369968 KIF27Q86VH2 1401 aa8.54□□□□□ -1.04
CLCC1-204ENST00000369968 PRDM4Q9UKN5 801 aa8.54□□□□□ -1.04
CLCC1-204ENST00000369968 MAGI3Q5TCQ9 1506 aa8.54□□□□□ -1.04
CLCC1-204ENST00000369968 ARID3CA6NKF2 412 aa8.54□□□□□ -1.04
CLCC1-204ENST00000369968 SLC24A1O60721 1099 aa8.54□□□□□ -1.04
CLCC1-204ENST00000369968 THOC2Q8NI27 1593 aaKnown RBP8.53□□□□□ -1.04
CLCC1-204ENST00000369968 HSPA5P11021 654 aaKnown RBP8.53□□□□□ -1.04
CLCC1-204ENST00000369968 RSPH6AQ9H0K4 717 aa8.53□□□□□ -1.04
CLCC1-204ENST00000369968 PDE4AP27815 886 aa8.53□□□□□ -1.04
CLCC1-204ENST00000369968 FGD6Q6ZV73 1430 aa8.51□□□□□ -1.05
CLCC1-204ENST00000369968 NUDCQ9Y266 331 aa8.51□□□□□ -1.05
CLCC1-204ENST00000369968 CTTNBP2Q8WZ74 1663 aa8.51□□□□□ -1.05
CLCC1-204ENST00000369968 USP19O94966 1318 aa8.51□□□□□ -1.05
CLCC1-204ENST00000369968 FYCO1Q9BQS8 1478 aa8.5□□□□□ -1.05
CLCC1-204ENST00000369968 ZNF608Q9ULD9 1512 aaPredicted RBP8.5□□□□□ -1.05
CLCC1-204ENST00000369968 KDM2BQ8NHM5 1336 aa8.5□□□□□ -1.05
CLCC1-204ENST00000369968 ANP32AP39687 249 aaKnown RBP8.49□□□□□ -1.05
CLCC1-204ENST00000369968 SAMD9Q5K651 1589 aa8.48□□□□□ -1.05
CLCC1-204ENST00000369968 KIF7Q2M1P5 1343 aa8.48□□□□□ -1.05
CLCC1-204ENST00000369968 KIF14Q15058 1648 aa8.47□□□□□ -1.05
CLCC1-204ENST00000369968 C8orf34Q49A92 452 aa8.47□□□□□ -1.05
CLCC1-204ENST00000369968 TCOF1Q13428 1488 aaKnown RBP8.47□□□□□ -1.05
CLCC1-204ENST00000369968 UGGT2Q9NYU1 1516 aa8.47□□□□□ -1.05
CLCC1-204ENST00000369968 FGD5Q6ZNL6 1462 aa8.47□□□□□ -1.05
CLCC1-204ENST00000369968 NBPF8Q3BBV2 869 aa8.47□□□□□ -1.05
CLCC1-204ENST00000369968 RTL5Q5HYW3 569 aaPredicted RBP8.47□□□□□ -1.05
CLCC1-204ENST00000369968 RPRD2Q5VT52 1461 aaKnown RBP8.46□□□□□ -1.05
CLCC1-204ENST00000369968 FRAT2O75474 233 aaPredicted RBP8.46□□□□□ -1.06
CLCC1-204ENST00000369968 MS4A1P11836 297 aa8.46□□□□□ -1.06
CLCC1-204ENST00000369968 EXOC6Q8TAG9 804 aa8.46□□□□□ -1.06
CLCC1-204ENST00000369968 PNISRQ8TF01 805 aaKnown RBP8.46□□□□□ -1.06
CLCC1-204ENST00000369968 SHROOM2Q13796 1616 aa8.46□□□□□ -1.06
CLCC1-204ENST00000369968 IGF1RP08069 1367 aa8.45□□□□□ -1.06
CLCC1-204ENST00000369968 ERBB4Q15303 1308 aa8.45□□□□□ -1.06
CLCC1-204ENST00000369968 TCERG1O14776 1098 aaKnown RBP8.45□□□□□ -1.06
CLCC1-204ENST00000369968 CASKIN1Q8WXD9 1431 aa8.45□□□□□ -1.06
CLCC1-204ENST00000369968 TONSLQ96HA7 1378 aa8.44□□□□□ -1.06
CLCC1-204ENST00000369968 SLC4A3P48751 1232 aa8.44□□□□□ -1.06
CLCC1-204ENST00000369968 FSD2A1L4K1 749 aa8.44□□□□□ -1.06
CLCC1-204ENST00000369968 FAM9BQ8IZU0 186 aa8.44□□□□□ -1.06
CLCC1-204ENST00000369968 ZNF777Q9ULD5 760 aaPredicted RBP8.44□□□□□ -1.06
CLCC1-204ENST00000369968 PLPPR3Q6T4P5 718 aa8.43□□□□□ -1.06
CLCC1-204ENST00000369968 ANTXR1Q9H6X2 564 aa8.43□□□□□ -1.06
CLCC1-204ENST00000369968 RRP1P56182 461 aaKnown RBP8.43□□□□□ -1.06
CLCC1-204ENST00000369968 PPM1GO15355 546 aaPredicted RBP8.43□□□□□ -1.06
CLCC1-204ENST00000369968 PODXL2Q9NZ53 605 aa8.43□□□□□ -1.06
CLCC1-204ENST00000369968 POGKQ9P215 609 aa8.42□□□□□ -1.06
CLCC1-204ENST00000369968 GRIN2BQ13224 1484 aa8.42□□□□□ -1.06
CLCC1-204ENST00000369968 CARMIL1Q5VZK9 1371 aa8.42□□□□□ -1.06
CLCC1-204ENST00000369968 SUPT6HQ7KZ85 1726 aaKnown RBP8.41□□□□□ -1.06
CLCC1-204ENST00000369968 VSIG10Q8N0Z9 540 aa8.41□□□□□ -1.06
CLCC1-204ENST00000369968 RTEL1-TNFRSF6BF6WH68 1400 aa8.41□□□□□ -1.06
CLCC1-204ENST00000369968 EFCAB5A4FU69 1503 aa8.41□□□□□ -1.06
CLCC1-204ENST00000369968 ZMYM4Q5VZL5 1548 aa8.41□□□□□ -1.06
CLCC1-204ENST00000369968 MIA2Q96PC5 1412 aa8.41□□□□□ -1.06
CLCC1-204ENST00000369968 GAPVD1Q14C86 1478 aa8.41□□□□□ -1.06
CLCC1-204ENST00000369968 FANCD2Q9BXW9 1451 aa8.41□□□□□ -1.06
CLCC1-204ENST00000369968 ANKRD30BQ9BXX2 1392 aa8.41□□□□□ -1.06
CLCC1-204ENST00000369968 CENPJQ9HC77 1338 aaPredicted RBP8.41□□□□□ -1.06
CLCC1-204ENST00000369968 MRS2Q9HD23 443 aa8.41□□□□□ -1.06
CLCC1-204ENST00000369968 TDRD9Q8NDG6 1382 aaKnown RBP8.4□□□□□ -1.06
CLCC1-204ENST00000369968 AAMPQ13685 434 aa8.4□□□□□ -1.07
CLCC1-204ENST00000369968 BLMP54132 1417 aaPredicted RBP8.4□□□□□ -1.07
CLCC1-204ENST00000369968 CLCN1P35523 988 aa8.39□□□□□ -1.07
CLCC1-204ENST00000369968 MTUS2Q5JR59 1369 aa8.39□□□□□ -1.07
CLCC1-204ENST00000369968 CC2D2AQ9P2K1 1620 aa8.38□□□□□ -1.07
CLCC1-204ENST00000369968 RRP9O43818 475 aaKnown RBP8.38□□□□□ -1.07
CLCC1-204ENST00000369968 KIF21AQ7Z4S6 1674 aa8.38□□□□□ -1.07
CLCC1-204ENST00000369968 CEP170Q5SW79 1584 aa8.38□□□□□ -1.07
CLCC1-204ENST00000369968 FHOD3Q2V2M9 1422 aa8.37□□□□□ -1.07
CLCC1-204ENST00000369968 FMN1Q68DA7 1419 aa8.37□□□□□ -1.07
CLCC1-204ENST00000369968 NPM2Q86SE8 214 aaKnown RBP8.37□□□□□ -1.07
CLCC1-204ENST00000369968 XRCC6P12956 609 aaKnown RBP eCLIP8.37□□□□□ -1.07
CLCC1-204ENST00000369968 PZPP20742 1482 aa8.37□□□□□ -1.07
CLCC1-204ENST00000369968 PLEKHD1A6NEE1 506 aa8.37□□□□□ -1.07
CLCC1-204ENST00000369968 PANK2Q9BZ23 570 aa8.37□□□□□ -1.07
CLCC1-204ENST00000369968 CFTRP13569 1480 aa8.36□□□□□ -1.07
CLCC1-204ENST00000369968 L3MBTL2Q969R5 705 aa8.36□□□□□ -1.07
CLCC1-204ENST00000369968 CROCC2H7BZ55 1655 aa8.36□□□□□ -1.07
CLCC1-204ENST00000369968 SENP3-EIF4A1A0A087X0R7 540 aa8.36□□□□□ -1.07
CLCC1-204ENST00000369968 C20orf194Q5TEA3 1177 aa8.36□□□□□ -1.07
CLCC1-204ENST00000369968 DNMT1P26358 1616 aaKnown RBP8.35□□□□□ -1.07
CLCC1-204ENST00000369968 HMGXB3Q12766 1538 aa8.34□□□□□ -1.07
CLCC1-204ENST00000369968 RBM10P98175 930 aaKnown RBP8.34□□□□□ -1.07
CLCC1-204ENST00000369968 DAXXQ9UER7 740 aaPredicted RBP8.34□□□□□ -1.07
CLCC1-204ENST00000369968 CLASP1Q7Z460 1538 aa8.34□□□□□ -1.07
CLCC1-204ENST00000369968 TRPM1Q7Z4N2 1603 aa8.34□□□□□ -1.07
CLCC1-204ENST00000369968 FGD1P98174 961 aa8.33□□□□□ -1.08
CLCC1-204ENST00000369968 EHBP1L1Q8N3D4 1523 aa8.33□□□□□ -1.08
CLCC1-204ENST00000369968 SEC24BO95487 1268 aa8.33□□□□□ -1.08
CLCC1-204ENST00000369968 EIF4G2P78344 907 aaKnown RBP eCLIP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms