RNA–Protein interactions for RNA: ENST00000369727.3

SFR1-201, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SFR1, Length 1,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-201ENST00000369727 LCE2DQ5TA82 110 aaPredicted RBP13.95□□□□□ -0.18
SFR1-201ENST00000369727 BOLA1Q9Y3E2 137 aa13.95□□□□□ -0.18
SFR1-201ENST00000369727 G3V3G9 751 aa13.94□□□□□ -0.18
SFR1-201ENST00000369727 WIZO95785 1651 aa13.93□□□□□ -0.18
SFR1-201ENST00000369727 PHF8Q9UPP1 1060 aa13.93□□□□□ -0.18
SFR1-201ENST00000369727 POTEMA6NI47 508 aa13.92□□□□□ -0.18
SFR1-201ENST00000369727 ERCC6Q03468 1493 aa13.91□□□□□ -0.18
SFR1-201ENST00000369727 POTEGQ6S5H5 508 aa13.9□□□□□ -0.18
SFR1-201ENST00000369727 NESP48681 1621 aa13.9□□□□□ -0.18
SFR1-201ENST00000369727 MS4A4AQ96JQ5 239 aa13.9□□□□□ -0.19
SFR1-201ENST00000369727 RSF1Q96T23 1441 aaPredicted RBP13.89□□□□□ -0.19
SFR1-201ENST00000369727 LAMC3Q9Y6N6 1575 aa13.89□□□□□ -0.19
SFR1-201ENST00000369727 CUX2O14529 1486 aa13.85□□□□□ -0.19
SFR1-201ENST00000369727 TMEM121BQ9BXQ6 578 aaPredicted RBP13.85□□□□□ -0.19
SFR1-201ENST00000369727 NLRP6P59044 892 aa13.84□□□□□ -0.19
SFR1-201ENST00000369727 ST18O60284 1047 aa13.82□□□□□ -0.2
SFR1-201ENST00000369727 FBXO22Q8NEZ5 403 aa13.82□□□□□ -0.2
SFR1-201ENST00000369727 MFRPQ9BY79 579 aa13.82□□□□□ -0.2
SFR1-201ENST00000369727 SNPHO15079 494 aa13.81□□□□□ -0.2
SFR1-201ENST00000369727 MICALL2Q8IY33 904 aa13.81□□□□□ -0.2
SFR1-201ENST00000369727 CADPSQ9ULU8 1353 aa13.8□□□□□ -0.2
SFR1-201ENST00000369727 TOP2AP11388 1531 aaKnown RBP13.79□□□□□ -0.2
SFR1-201ENST00000369727 PDS5BQ9NTI5 1447 aa13.79□□□□□ -0.2
SFR1-201ENST00000369727 KIF21AQ7Z4S6 1674 aa13.75□□□□□ -0.21
SFR1-201ENST00000369727 THOC2Q8NI27 1593 aaKnown RBP13.75□□□□□ -0.21
SFR1-201ENST00000369727 HS6ST3Q8IZP7 471 aa13.73□□□□□ -0.21
SFR1-201ENST00000369727 TMEM92Q6UXU6 159 aa13.72□□□□□ -0.21
SFR1-201ENST00000369727 CHGAP10645 457 aaKnown RBP13.71□□□□□ -0.22
SFR1-201ENST00000369727 CFTRP13569 1480 aa13.69□□□□□ -0.22
SFR1-201ENST00000369727 HOXB3P14651 431 aaPredicted RBP13.65□□□□□ -0.22
SFR1-201ENST00000369727 MRC2Q9UBG0 1479 aa13.65□□□□□ -0.22
SFR1-201ENST00000369727 MARVELD3Q96A59 401 aa13.64□□□□□ -0.23
SFR1-201ENST00000369727 PCDH10Q9P2E7 1040 aa13.64□□□□□ -0.23
SFR1-201ENST00000369727 FANCD2Q9BXW9 1451 aa13.64□□□□□ -0.23
SFR1-201ENST00000369727 CEP164Q9UPV0 1460 aa13.64□□□□□ -0.23
SFR1-201ENST00000369727 CCDC88BA6NC98 1476 aa13.62□□□□□ -0.23
SFR1-201ENST00000369727 PPP1R37O75864 691 aa13.62□□□□□ -0.23
SFR1-201ENST00000369727 WDR62O43379 1518 aa13.61□□□□□ -0.23
SFR1-201ENST00000369727 DNAJC5Q9H3Z4 198 aa13.6□□□□□ -0.23
SFR1-201ENST00000369727 PRDM2Q13029 1718 aa13.6□□□□□ -0.23
SFR1-201ENST00000369727 DOK7Q18PE1 504 aa13.59□□□□□ -0.23
SFR1-201ENST00000369727 CDAN1Q8IWY9 1227 aa13.58□□□□□ -0.24
SFR1-201ENST00000369727 PLSCR2Q9NRY7 297 aa13.58□□□□□ -0.24
SFR1-201ENST00000369727 ZNF710Q8N1W2 664 aa13.57□□□□□ -0.24
SFR1-201ENST00000369727 EMP3P54852 163 aa13.56□□□□□ -0.24
SFR1-201ENST00000369727 NKX1-1Q15270 411 aaPredicted RBP13.56□□□□□ -0.24
SFR1-201ENST00000369727 C2orf72A6NCS6 295 aa13.51□□□□□ -0.25
SFR1-201ENST00000369727 URB2Q14146 1524 aaKnown RBP13.5□□□□□ -0.25
SFR1-201ENST00000369727 KIF3CO14782 793 aa13.5□□□□□ -0.25
SFR1-201ENST00000369727 RIMBP2O15034 1052 aa13.5□□□□□ -0.25
SFR1-201ENST00000369727 HOXB1P14653 301 aaPredicted RBP13.5□□□□□ -0.25
SFR1-201ENST00000369727 FAM205CA6NFA0 338 aa13.47□□□□□ -0.25
SFR1-201ENST00000369727 POTEB3A0JP26 581 aa13.46□□□□□ -0.26
SFR1-201ENST00000369727 POTEBQ6S5H4 581 aa13.46□□□□□ -0.26
SFR1-201ENST00000369727 TMC2Q8TDI7 906 aa13.46□□□□□ -0.26
SFR1-201ENST00000369727 HS3ST6Q96QI5 342 aa13.46□□□□□ -0.26
SFR1-201ENST00000369727 ZSWIM6Q9HCJ5 1215 aa13.45□□□□□ -0.26
SFR1-201ENST00000369727 RYDENQ9NUL5 291 aaKnown RBP13.43□□□□□ -0.26
SFR1-201ENST00000369727 ABCC8Q09428 1581 aa13.43□□□□□ -0.26
SFR1-201ENST00000369727 GPR153Q6NV75 609 aa13.42□□□□□ -0.26
SFR1-201ENST00000369727 TOPBP1Q92547 1522 aa13.41□□□□□ -0.26
SFR1-201ENST00000369727 ARSIQ5FYB1 569 aa13.39□□□□□ -0.27
SFR1-201ENST00000369727 ERBB3P21860 1342 aa13.39□□□□□ -0.27
SFR1-201ENST00000369727 SUPT5HO00267 1087 aaKnown RBP13.39□□□□□ -0.27
SFR1-201ENST00000369727 DNMBPQ6XZF7 1577 aa13.39□□□□□ -0.27
SFR1-201ENST00000369727 GTPBP6O43824 516 aaPredicted RBP13.37□□□□□ -0.27
SFR1-201ENST00000369727 AMER1Q5JTC6 1135 aaPredicted RBP13.37□□□□□ -0.27
SFR1-201ENST00000369727 IFT140Q96RY7 1462 aa13.36□□□□□ -0.27
SFR1-201ENST00000369727 KHSRPQ92945 711 aaKnown RBP eCLIP13.36□□□□□ -0.27
SFR1-201ENST00000369727 RTN4Q9NQC3 1192 aaKnown RBP13.34□□□□□ -0.27
SFR1-201ENST00000369727 GPHNQ9NQX3 736 aaPredicted RBP13.33□□□□□ -0.28
SFR1-201ENST00000369727 VARS2Q5ST30 1063 aaKnown RBP13.32□□□□□ -0.28
SFR1-201ENST00000369727 SLC34A2O95436 690 aa13.3□□□□□ -0.28
SFR1-201ENST00000369727 FOXK1P85037 733 aa13.3□□□□□ -0.28
SFR1-201ENST00000369727 KRTAP3-3Q9BYR6 98 aa13.3□□□□□ -0.28
SFR1-201ENST00000369727 KRTAP3-2Q9BYR7 98 aa13.3□□□□□ -0.28
SFR1-201ENST00000369727 ZNF608Q9ULD9 1512 aaPredicted RBP13.29□□□□□ -0.28
SFR1-201ENST00000369727 DSG2Q14126 1118 aa13.29□□□□□ -0.28
SFR1-201ENST00000369727 PLPP6Q8IY26 295 aa13.29□□□□□ -0.28
SFR1-201ENST00000369727 PCDHGA4Q9Y5G9 962 aa13.29□□□□□ -0.28
SFR1-201ENST00000369727 TARBP1Q13395 1621 aaKnown RBP13.28□□□□□ -0.28
SFR1-201ENST00000369727 POLA1P09884 1462 aaPredicted RBP13.27□□□□□ -0.28
SFR1-201ENST00000369727 NUDT7P0C024 238 aa13.26□□□□□ -0.29
SFR1-201ENST00000369727 ZNF316A6NFI3 1004 aaPredicted RBP13.24□□□□□ -0.29
SFR1-201ENST00000369727 CRISPLD2Q9H0B8 497 aa13.24□□□□□ -0.29
SFR1-201ENST00000369727 CUX1P39880 1505 aa13.24□□□□□ -0.29
SFR1-201ENST00000369727 EIF4G3O43432 1585 aaKnown RBP13.24□□□□□ -0.29
SFR1-201ENST00000369727 SPNS2Q8IVW8 549 aa13.23□□□□□ -0.29
SFR1-201ENST00000369727 FGD5Q6ZNL6 1462 aa13.22□□□□□ -0.29
SFR1-201ENST00000369727 SOGA1O94964 1423 aa13.22□□□□□ -0.29
SFR1-201ENST00000369727 ZNF687Q8N1G0 1237 aa13.22□□□□□ -0.29
SFR1-201ENST00000369727 NCKAP5LQ9HCH0 1330 aa13.21□□□□□ -0.3
SFR1-201ENST00000369727 RAD54L2Q9Y4B4 1467 aa13.2□□□□□ -0.3
SFR1-201ENST00000369727 WDR97A6NE52 1622 aa13.2□□□□□ -0.3
SFR1-201ENST00000369727 PTCD2Q8WV60 388 aaKnown RBP13.2□□□□□ -0.3
SFR1-201ENST00000369727 BBXQ8WY36 941 aaPredicted RBP13.2□□□□□ -0.3
SFR1-201ENST00000369727 AQRO60306 1485 aaKnown RBP eCLIP13.19□□□□□ -0.3
SFR1-201ENST00000369727 PDE4AP27815 886 aa13.18□□□□□ -0.3
SFR1-201ENST00000369727 LHX6Q9UPM6 363 aa13.18□□□□□ -0.3
SFR1-201ENST00000369727 PPP1R15BQ5SWA1 713 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms