RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 ERCC6L2Q5T890 1561 aa21.57■■□□□ 1.04
PHTF1-202ENST00000369598 UACAQ9BZF9 1416 aa21.57■■□□□ 1.04
PHTF1-202ENST00000369598 CHIC2Q9UKJ5 165 aa21.55■■□□□ 1.04
PHTF1-202ENST00000369598 CFDP1Q9UEE9 299 aaPredicted RBP21.54■■□□□ 1.04
PHTF1-202ENST00000369598 MSH5O43196 834 aa21.53■■□□□ 1.04
PHTF1-202ENST00000369598 HIRIP3Q9BW71 556 aaPredicted RBP21.53■■□□□ 1.04
PHTF1-202ENST00000369598 IRX6P78412 446 aaPredicted RBP21.52■■□□□ 1.04
PHTF1-202ENST00000369598 ERICH6Q7L0X2 663 aa21.51■■□□□ 1.03
PHTF1-202ENST00000369598 ZNF644Q9H582 1327 aaPredicted RBP21.51■■□□□ 1.03
PHTF1-202ENST00000369598 HFM1A2PYH4 1435 aa21.5■■□□□ 1.03
PHTF1-202ENST00000369598 RRP7BPQ9NSQ0 103 aa21.49■■□□□ 1.03
PHTF1-202ENST00000369598 ZNF777Q9ULD5 760 aaPredicted RBP21.49■■□□□ 1.03
PHTF1-202ENST00000369598 KIF14Q15058 1648 aa21.49■■□□□ 1.03
PHTF1-202ENST00000369598 NEFLP07196 543 aa21.48■■□□□ 1.03
PHTF1-202ENST00000369598 ADCY10Q96PN6 1610 aa21.48■■□□□ 1.03
PHTF1-202ENST00000369598 GPATCH8Q9UKJ3 1502 aaKnown RBP21.47■■□□□ 1.03
PHTF1-202ENST00000369598 DDX10Q13206 875 aaKnown RBP21.47■■□□□ 1.03
PHTF1-202ENST00000369598 OSCARQ8IYS5 282 aa21.46■■□□□ 1.03
PHTF1-202ENST00000369598 NAIPQ13075 1403 aa21.46■■□□□ 1.03
PHTF1-202ENST00000369598 ABCC2Q92887 1545 aa21.44■■□□□ 1.02
PHTF1-202ENST00000369598 ITSN2Q9NZM3 1697 aa21.43■■□□□ 1.02
PHTF1-202ENST00000369598 DAPK1P53355 1430 aa21.41■■□□□ 1.02
PHTF1-202ENST00000369598 ABCC5O15440 1437 aa21.4■■□□□ 1.02
PHTF1-202ENST00000369598 ABCC10Q5T3U5 1492 aa21.4■■□□□ 1.02
PHTF1-202ENST00000369598 MAPKBP1O60336 1514 aa21.39■■□□□ 1.01
PHTF1-202ENST00000369598 CAMSAP2Q08AD1 1489 aa21.39■■□□□ 1.01
PHTF1-202ENST00000369598 DNMT1P26358 1616 aaKnown RBP21.36■■□□□ 1.01
PHTF1-202ENST00000369598 AKNAQ7Z591 1439 aa21.36■■□□□ 1.01
PHTF1-202ENST00000369598 UHRF1BP1LA0JNW5 1464 aa21.35■■□□□ 1.01
PHTF1-202ENST00000369598 ROCK1Q13464 1354 aa21.34■■□□□ 1.01
PHTF1-202ENST00000369598 CDC42BPAQ5VT25 1732 aa21.34■■□□□ 1.01
PHTF1-202ENST00000369598 SIN3AQ96ST3 1273 aa21.34■■□□□ 1.01
PHTF1-202ENST00000369598 GCC2Q8IWJ2 1684 aa21.3■■□□□ 1
PHTF1-202ENST00000369598 KDM5BQ9UGL1 1544 aa21.3■■□□□ 1
PHTF1-202ENST00000369598 NBR1Q14596 966 aa21.29■■□□□ 1
PHTF1-202ENST00000369598 ZCCHC11Q5TAX3 1644 aaKnown RBP21.28■■□□□ 1
PHTF1-202ENST00000369598 ANO8Q9HCE9 1232 aaPredicted RBP21.28■■□□□ 1
PHTF1-202ENST00000369598 HNRNPMP52272 730 aaKnown RBP eCLIP21.28■■□□□ 1
PHTF1-202ENST00000369598 TSPY4P0CV99 314 aa21.27■■□□□ 1
PHTF1-202ENST00000369598 TSPY10P0CW01 314 aa21.27■■□□□ 1
PHTF1-202ENST00000369598 KDM6BO15054 1643 aa21.24■□□□□ 0.99
PHTF1-202ENST00000369598 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.24■□□□□ 0.99
PHTF1-202ENST00000369598 NCOA1Q15788 1441 aa21.24■□□□□ 0.99
PHTF1-202ENST00000369598 ANKRD30AQ9BXX3 1397 aa21.23■□□□□ 0.99
PHTF1-202ENST00000369598 TIMELESSQ9UNS1 1208 aa21.22■□□□□ 0.99
PHTF1-202ENST00000369598 DEKP35659 375 aaKnown RBP21.22■□□□□ 0.99
PHTF1-202ENST00000369598 CDC42BPBQ9Y5S2 1711 aa21.22■□□□□ 0.99
PHTF1-202ENST00000369598 TTC37Q6PGP7 1564 aa21.21■□□□□ 0.99
PHTF1-202ENST00000369598 MPHOSPH9Q99550 1183 aa21.21■□□□□ 0.99
PHTF1-202ENST00000369598 PREX2Q70Z35 1606 aa21.21■□□□□ 0.99
PHTF1-202ENST00000369598 RSPH4AQ5TD94 716 aa21.21■□□□□ 0.99
PHTF1-202ENST00000369598 ARHGAP5Q13017 1502 aa21.2■□□□□ 0.98
PHTF1-202ENST00000369598 ADGRL2O95490 1459 aa21.18■□□□□ 0.98
PHTF1-202ENST00000369598 CROCC2H7BZ55 1655 aa21.18■□□□□ 0.98
PHTF1-202ENST00000369598 NPM1P06748 294 aaKnown RBP eCLIP21.18■□□□□ 0.98
PHTF1-202ENST00000369598 CCDC136Q96JN2 1154 aa21.18■□□□□ 0.98
PHTF1-202ENST00000369598 C9orf84Q5VXU9 1444 aa21.18■□□□□ 0.98
PHTF1-202ENST00000369598 ADGBQ8N7X0 1667 aa21.18■□□□□ 0.98
PHTF1-202ENST00000369598 SAMD9LQ8IVG5 1584 aa21.16■□□□□ 0.98
PHTF1-202ENST00000369598 MBD5Q9P267 1494 aa21.16■□□□□ 0.98
PHTF1-202ENST00000369598 EFCAB2Q5VUJ9 269 aa21.15■□□□□ 0.98
PHTF1-202ENST00000369598 RTN4Q9NQC3 1192 aaKnown RBP21.15■□□□□ 0.98
PHTF1-202ENST00000369598 MYO5CQ9NQX4 1742 aa21.15■□□□□ 0.98
PHTF1-202ENST00000369598 SHANK2Q9UPX8 1470 aa21.15■□□□□ 0.98
PHTF1-202ENST00000369598 PLCH2O75038 1416 aa21.14■□□□□ 0.97
PHTF1-202ENST00000369598 ARHGEF5Q12774 1597 aa21.14■□□□□ 0.97
PHTF1-202ENST00000369598 SLC4A1APQ9BWU0 796 aaKnown RBP21.13■□□□□ 0.97
PHTF1-202ENST00000369598 TONSLQ96HA7 1378 aa21.13■□□□□ 0.97
PHTF1-202ENST00000369598 CCDC141Q6ZP82 1450 aa21.12■□□□□ 0.97
PHTF1-202ENST00000369598 ANKRD50Q9ULJ7 1429 aa21.12■□□□□ 0.97
PHTF1-202ENST00000369598 WDR7Q9Y4E6 1490 aa21.11■□□□□ 0.97
PHTF1-202ENST00000369598 FOXD1Q16676 465 aa21.1■□□□□ 0.97
PHTF1-202ENST00000369598 PPP1R15AO75807 674 aaPredicted RBP21.1■□□□□ 0.97
PHTF1-202ENST00000369598 PLEKHH2Q8IVE3 1493 aa21.1■□□□□ 0.97
PHTF1-202ENST00000369598 DENND4BO75064 1496 aaPredicted RBP21.09■□□□□ 0.97
PHTF1-202ENST00000369598 SYCP2Q9BX26 1530 aa21.09■□□□□ 0.97
PHTF1-202ENST00000369598 KIAA1107Q9UPP5 1409 aa21.08■□□□□ 0.97
PHTF1-202ENST00000369598 KIF15Q9NS87 1388 aa21.07■□□□□ 0.96
PHTF1-202ENST00000369598 ASXL2Q76L83 1435 aa21.07■□□□□ 0.96
PHTF1-202ENST00000369598 HNRNPUQ00839 825 aaKnown RBP eCLIP21.04■□□□□ 0.96
PHTF1-202ENST00000369598 SALL2Q9Y467 1007 aaPredicted RBP21.04■□□□□ 0.96
PHTF1-202ENST00000369598 SENP3-EIF4A1A0A087X0R7 540 aa21.01■□□□□ 0.95
PHTF1-202ENST00000369598 ANP32CO43423 234 aa21.01■□□□□ 0.95
PHTF1-202ENST00000369598 NUP155O75694 1391 aa21.01■□□□□ 0.95
PHTF1-202ENST00000369598 ARHGEF12Q9NZN5 1544 aa21.01■□□□□ 0.95
PHTF1-202ENST00000369598 CNGB1Q14028 1251 aaPredicted RBP21■□□□□ 0.95
PHTF1-202ENST00000369598 PZPP20742 1482 aa21■□□□□ 0.95
PHTF1-202ENST00000369598 ANKRD30BQ9BXX2 1392 aa21■□□□□ 0.95
PHTF1-202ENST00000369598 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.99■□□□□ 0.95
PHTF1-202ENST00000369598 PKD2Q13563 968 aa20.99■□□□□ 0.95
PHTF1-202ENST00000369598 B4GALNT3Q6L9W6 998 aa20.99■□□□□ 0.95
PHTF1-202ENST00000369598 ARAP3Q8WWN8 1544 aa20.97■□□□□ 0.95
PHTF1-202ENST00000369598 MAST1Q9Y2H9 1570 aa20.97■□□□□ 0.95
PHTF1-202ENST00000369598 CYB5RLQ6IPT4 315 aa20.96■□□□□ 0.95
PHTF1-202ENST00000369598 ABCA9Q8IUA7 1624 aa20.96■□□□□ 0.95
PHTF1-202ENST00000369598 AFAP1Q8N556 730 aa20.95■□□□□ 0.94
PHTF1-202ENST00000369598 ABCC1P33527 1531 aa20.95■□□□□ 0.94
PHTF1-202ENST00000369598 FANCAO15360 1455 aa20.95■□□□□ 0.94
PHTF1-202ENST00000369598 TRAPPC8Q9Y2L5 1435 aa20.95■□□□□ 0.94
PHTF1-202ENST00000369598 PAK3O75914 559 aaPredicted RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms