RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 CD109Q6YHK3 1445 aa16.63■□□□□ 0.25
BRCC3-204ENST00000369462 MYO5CQ9NQX4 1742 aa16.62■□□□□ 0.25
BRCC3-204ENST00000369462 PTPN23Q9H3S7 1636 aa16.62■□□□□ 0.25
BRCC3-204ENST00000369462 ARHGAP5Q13017 1502 aa16.62■□□□□ 0.25
BRCC3-204ENST00000369462 PREX2Q70Z35 1606 aa16.62■□□□□ 0.25
BRCC3-204ENST00000369462 EFCAB2Q5VUJ9 269 aa16.61■□□□□ 0.25
BRCC3-204ENST00000369462 DIP2BQ9P265 1576 aa16.61■□□□□ 0.25
BRCC3-204ENST00000369462 CDC42BPBQ9Y5S2 1711 aa16.61■□□□□ 0.25
BRCC3-204ENST00000369462 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.6■□□□□ 0.25
BRCC3-204ENST00000369462 TCOF1Q13428 1488 aaKnown RBP16.59■□□□□ 0.25
BRCC3-204ENST00000369462 GLI2P10070 1586 aa16.59■□□□□ 0.25
BRCC3-204ENST00000369462 CAMSAP2Q08AD1 1489 aa16.58■□□□□ 0.25
BRCC3-204ENST00000369462 FANCAO15360 1455 aa16.57■□□□□ 0.24
BRCC3-204ENST00000369462 ARAP3Q8WWN8 1544 aa16.57■□□□□ 0.24
BRCC3-204ENST00000369462 HNRNPMP52272 730 aaKnown RBP eCLIP16.55■□□□□ 0.24
BRCC3-204ENST00000369462 TRHP20396 242 aaPredicted RBP16.55■□□□□ 0.24
BRCC3-204ENST00000369462 SAMD9LQ8IVG5 1584 aa16.55■□□□□ 0.24
BRCC3-204ENST00000369462 MAP3K4Q9Y6R4 1608 aa16.54■□□□□ 0.24
BRCC3-204ENST00000369462 KIF13AQ9H1H9 1805 aa16.53■□□□□ 0.24
BRCC3-204ENST00000369462 PHF23Q9BUL5 403 aaPredicted RBP16.52■□□□□ 0.23
BRCC3-204ENST00000369462 AKNAQ7Z591 1439 aa16.51■□□□□ 0.23
BRCC3-204ENST00000369462 PLEKHH2Q8IVE3 1493 aa16.51■□□□□ 0.23
BRCC3-204ENST00000369462 CHIC2Q9UKJ5 165 aa16.51■□□□□ 0.23
BRCC3-204ENST00000369462 PTPRKQ15262 1439 aa16.5■□□□□ 0.23
BRCC3-204ENST00000369462 KIAA1107Q9UPP5 1409 aa16.5■□□□□ 0.23
BRCC3-204ENST00000369462 SYCP2Q9BX26 1530 aa16.5■□□□□ 0.23
BRCC3-204ENST00000369462 MBD5Q9P267 1494 aa16.5■□□□□ 0.23
BRCC3-204ENST00000369462 ABCC5O15440 1437 aa16.5■□□□□ 0.23
BRCC3-204ENST00000369462 TSPOAP1O95153 1857 aa16.5■□□□□ 0.23
BRCC3-204ENST00000369462 DAPK1P53355 1430 aa16.5■□□□□ 0.23
BRCC3-204ENST00000369462 ADGRL1O94910 1474 aa16.49■□□□□ 0.23
BRCC3-204ENST00000369462 ARHGEF12Q9NZN5 1544 aa16.49■□□□□ 0.23
BRCC3-204ENST00000369462 RSPH4AQ5TD94 716 aa16.48■□□□□ 0.23
BRCC3-204ENST00000369462 SCAPERQ9BY12 1400 aa16.48■□□□□ 0.23
BRCC3-204ENST00000369462 ABCC1P33527 1531 aa16.48■□□□□ 0.23
BRCC3-204ENST00000369462 DNMT1P26358 1616 aaKnown RBP16.47■□□□□ 0.23
BRCC3-204ENST00000369462 TSPY4P0CV99 314 aa16.47■□□□□ 0.23
BRCC3-204ENST00000369462 TSPY10P0CW01 314 aa16.47■□□□□ 0.23
BRCC3-204ENST00000369462 NEO1Q92859 1461 aa16.47■□□□□ 0.23
BRCC3-204ENST00000369462 AFAP1Q8N556 730 aa16.46■□□□□ 0.23
BRCC3-204ENST00000369462 CFAP74Q9C0B2 1584 aa16.46■□□□□ 0.22
BRCC3-204ENST00000369462 TEX14Q8IWB6 1497 aa16.46■□□□□ 0.22
BRCC3-204ENST00000369462 TRAPPC8Q9Y2L5 1435 aa16.46■□□□□ 0.22
BRCC3-204ENST00000369462 CCDC141Q6ZP82 1450 aa16.45■□□□□ 0.22
BRCC3-204ENST00000369462 ARHGEF5Q12774 1597 aa16.45■□□□□ 0.22
BRCC3-204ENST00000369462 PPRC1Q5VV67 1664 aaKnown RBP16.44■□□□□ 0.22
BRCC3-204ENST00000369462 RRP7BPQ9NSQ0 103 aa16.43■□□□□ 0.22
BRCC3-204ENST00000369462 C9orf84Q5VXU9 1444 aa16.42■□□□□ 0.22
BRCC3-204ENST00000369462 RAPGEF3O95398 923 aa16.41■□□□□ 0.22
BRCC3-204ENST00000369462 SPAG9O60271 1321 aaKnown RBP16.39■□□□□ 0.22
BRCC3-204ENST00000369462 DENND4BO75064 1496 aaPredicted RBP16.39■□□□□ 0.21
BRCC3-204ENST00000369462 SHANK2Q9UPX8 1470 aa16.39■□□□□ 0.21
BRCC3-204ENST00000369462 CROCC2H7BZ55 1655 aa16.39■□□□□ 0.21
BRCC3-204ENST00000369462 MYT1LQ9UL68 1186 aa16.39■□□□□ 0.21
BRCC3-204ENST00000369462 ZNF518AQ6AHZ1 1483 aa16.39■□□□□ 0.21
BRCC3-204ENST00000369462 POGZQ7Z3K3 1410 aa16.38■□□□□ 0.21
BRCC3-204ENST00000369462 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
BRCC3-204ENST00000369462 ANKRD30AQ9BXX3 1397 aa16.38■□□□□ 0.21
BRCC3-204ENST00000369462 NCOA1Q15788 1441 aa16.38■□□□□ 0.21
BRCC3-204ENST00000369462 HFM1A2PYH4 1435 aa16.37■□□□□ 0.21
BRCC3-204ENST00000369462 NAIPQ13075 1403 aa16.36■□□□□ 0.21
BRCC3-204ENST00000369462 SETD5Q9C0A6 1442 aa16.36■□□□□ 0.21
BRCC3-204ENST00000369462 ADGRL2O95490 1459 aa16.35■□□□□ 0.21
BRCC3-204ENST00000369462 COL17A1Q9UMD9 1497 aaPredicted RBP16.34■□□□□ 0.21
BRCC3-204ENST00000369462 RAB3GAP2Q9H2M9 1393 aa16.33■□□□□ 0.21
BRCC3-204ENST00000369462 MAST1Q9Y2H9 1570 aa16.33■□□□□ 0.2
BRCC3-204ENST00000369462 KIF15Q9NS87 1388 aa16.33■□□□□ 0.2
BRCC3-204ENST00000369462 RTEL1-TNFRSF6BF6WH68 1400 aa16.33■□□□□ 0.2
BRCC3-204ENST00000369462 ADGBQ8N7X0 1667 aa16.33■□□□□ 0.2
BRCC3-204ENST00000369462 KDM5CP41229 1560 aa16.32■□□□□ 0.2
BRCC3-204ENST00000369462 ZFYVE16Q7Z3T8 1539 aa16.31■□□□□ 0.2
BRCC3-204ENST00000369462 RICTORQ6R327 1708 aa16.31■□□□□ 0.2
BRCC3-204ENST00000369462 ATP7AQ04656 1500 aa16.31■□□□□ 0.2
BRCC3-204ENST00000369462 MLH3Q9UHC1 1453 aa16.3■□□□□ 0.2
BRCC3-204ENST00000369462 INO80Q9ULG1 1556 aaPredicted RBP16.29■□□□□ 0.2
BRCC3-204ENST00000369462 FRMPD1Q5SYB0 1578 aa16.29■□□□□ 0.2
BRCC3-204ENST00000369462 ANKRD50Q9ULJ7 1429 aa16.28■□□□□ 0.2
BRCC3-204ENST00000369462 PLXNC1O60486 1568 aa16.28■□□□□ 0.2
BRCC3-204ENST00000369462 GCC2Q8IWJ2 1684 aa16.27■□□□□ 0.2
BRCC3-204ENST00000369462 HECW2Q9P2P5 1572 aa16.27■□□□□ 0.2
BRCC3-204ENST00000369462 KIDINS220Q9ULH0 1771 aa16.27■□□□□ 0.2
BRCC3-204ENST00000369462 HRCP23327 699 aa16.26■□□□□ 0.19
BRCC3-204ENST00000369462 KDM6BO15054 1643 aa16.26■□□□□ 0.19
BRCC3-204ENST00000369462 YEATS2Q9ULM3 1422 aa16.25■□□□□ 0.19
BRCC3-204ENST00000369462 ZMYM4Q5VZL5 1548 aa16.24■□□□□ 0.19
BRCC3-204ENST00000369462 DUOX2Q9NRD8 1548 aa16.24■□□□□ 0.19
BRCC3-204ENST00000369462 TRIM52Q96A61 297 aa16.23■□□□□ 0.19
BRCC3-204ENST00000369462 MAGI2Q86UL8 1455 aa16.23■□□□□ 0.19
BRCC3-204ENST00000369462 DHX29Q7Z478 1369 aaKnown RBP16.22■□□□□ 0.19
BRCC3-204ENST00000369462 ABCA6Q8N139 1617 aa16.21■□□□□ 0.19
BRCC3-204ENST00000369462 A2MP01023 1474 aa16.2■□□□□ 0.18
BRCC3-204ENST00000369462 ERBINQ96RT1 1412 aa16.2■□□□□ 0.18
BRCC3-204ENST00000369462 DIP2CQ9Y2E4 1556 aa16.19■□□□□ 0.18
BRCC3-204ENST00000369462 KIF3BO15066 747 aa16.19■□□□□ 0.18
BRCC3-204ENST00000369462 CCER1Q8TC90 406 aaPredicted RBP16.19■□□□□ 0.18
BRCC3-204ENST00000369462 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.18
BRCC3-204ENST00000369462 ATP10AO60312 1499 aa16.17■□□□□ 0.18
BRCC3-204ENST00000369462 ACIN1Q9UKV3 1341 aaKnown RBP16.16■□□□□ 0.18
BRCC3-204ENST00000369462 NUP155O75694 1391 aa16.15■□□□□ 0.18
BRCC3-204ENST00000369462 DHX57Q6P158 1386 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms