RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 RIMBP3BA6NNM3 1639 aa21.08■□□□□ 0.97
HMGCS2-201ENST00000369406 RIMBP3Q9UFD9 1639 aa21.08■□□□□ 0.97
HMGCS2-201ENST00000369406 DAPK1P53355 1430 aa21.08■□□□□ 0.97
HMGCS2-201ENST00000369406 CROCC2H7BZ55 1655 aa21.08■□□□□ 0.97
HMGCS2-201ENST00000369406 MYO5CQ9NQX4 1742 aa21.08■□□□□ 0.96
HMGCS2-201ENST00000369406 KDM6BO15054 1643 aa21.07■□□□□ 0.96
HMGCS2-201ENST00000369406 CHIC2Q9UKJ5 165 aa21.07■□□□□ 0.96
HMGCS2-201ENST00000369406 GCC2Q8IWJ2 1684 aa21.07■□□□□ 0.96
HMGCS2-201ENST00000369406 SAMD9LQ8IVG5 1584 aa21.06■□□□□ 0.96
HMGCS2-201ENST00000369406 KCNH8Q96L42 1107 aa21.06■□□□□ 0.96
HMGCS2-201ENST00000369406 NAIPQ13075 1403 aa21.06■□□□□ 0.96
HMGCS2-201ENST00000369406 ZNF777Q9ULD5 760 aaPredicted RBP21.06■□□□□ 0.96
HMGCS2-201ENST00000369406 HFM1A2PYH4 1435 aa21.06■□□□□ 0.96
HMGCS2-201ENST00000369406 ZEB1P37275 1124 aaPredicted RBP21.05■□□□□ 0.96
HMGCS2-201ENST00000369406 WDR7Q9Y4E6 1490 aa21.02■□□□□ 0.96
HMGCS2-201ENST00000369406 RRP7BPQ9NSQ0 103 aa21.01■□□□□ 0.95
HMGCS2-201ENST00000369406 ADGBQ8N7X0 1667 aa21■□□□□ 0.95
HMGCS2-201ENST00000369406 ASXL2Q76L83 1435 aa21■□□□□ 0.95
HMGCS2-201ENST00000369406 MAPKBP1O60336 1514 aa20.99■□□□□ 0.95
HMGCS2-201ENST00000369406 ARHGAP5Q13017 1502 aa20.98■□□□□ 0.95
HMGCS2-201ENST00000369406 AKNAQ7Z591 1439 aa20.97■□□□□ 0.95
HMGCS2-201ENST00000369406 MBD5Q9P267 1494 aa20.96■□□□□ 0.95
HMGCS2-201ENST00000369406 SYCP2Q9BX26 1530 aa20.95■□□□□ 0.94
HMGCS2-201ENST00000369406 ABCA9Q8IUA7 1624 aa20.94■□□□□ 0.94
HMGCS2-201ENST00000369406 ARHGEF5Q12774 1597 aa20.93■□□□□ 0.94
HMGCS2-201ENST00000369406 HNRNPMP52272 730 aaKnown RBP eCLIP20.93■□□□□ 0.94
HMGCS2-201ENST00000369406 PLCH2O75038 1416 aa20.92■□□□□ 0.94
HMGCS2-201ENST00000369406 ARHGEF12Q9NZN5 1544 aa20.92■□□□□ 0.94
HMGCS2-201ENST00000369406 ROCK1Q13464 1354 aa20.92■□□□□ 0.94
HMGCS2-201ENST00000369406 CYB5RLQ6IPT4 315 aa20.9■□□□□ 0.94
HMGCS2-201ENST00000369406 ADGRL2O95490 1459 aa20.9■□□□□ 0.94
HMGCS2-201ENST00000369406 NCOA1Q15788 1441 aa20.88■□□□□ 0.93
HMGCS2-201ENST00000369406 SHANK2Q9UPX8 1470 aa20.87■□□□□ 0.93
HMGCS2-201ENST00000369406 C9orf84Q5VXU9 1444 aa20.87■□□□□ 0.93
HMGCS2-201ENST00000369406 ABCC1P33527 1531 aa20.86■□□□□ 0.93
HMGCS2-201ENST00000369406 DENND4BO75064 1496 aaPredicted RBP20.85■□□□□ 0.93
HMGCS2-201ENST00000369406 CCDC141Q6ZP82 1450 aa20.85■□□□□ 0.93
HMGCS2-201ENST00000369406 ARAP3Q8WWN8 1544 aa20.84■□□□□ 0.93
HMGCS2-201ENST00000369406 NPM1P06748 294 aaKnown RBP eCLIP20.83■□□□□ 0.92
HMGCS2-201ENST00000369406 CLSPNQ9HAW4 1339 aa20.81■□□□□ 0.92
HMGCS2-201ENST00000369406 KIAA1107Q9UPP5 1409 aa20.8■□□□□ 0.92
HMGCS2-201ENST00000369406 MAST1Q9Y2H9 1570 aa20.8■□□□□ 0.92
HMGCS2-201ENST00000369406 TRAPPC8Q9Y2L5 1435 aa20.79■□□□□ 0.92
HMGCS2-201ENST00000369406 FANCAO15360 1455 aa20.78■□□□□ 0.92
HMGCS2-201ENST00000369406 PLEKHH2Q8IVE3 1493 aa20.78■□□□□ 0.92
HMGCS2-201ENST00000369406 EFCAB2Q5VUJ9 269 aa20.78■□□□□ 0.92
HMGCS2-201ENST00000369406 ANKRD30AQ9BXX3 1397 aa20.77■□□□□ 0.92
HMGCS2-201ENST00000369406 SIN3AQ96ST3 1273 aa20.75■□□□□ 0.91
HMGCS2-201ENST00000369406 TSPY4P0CV99 314 aa20.73■□□□□ 0.91
HMGCS2-201ENST00000369406 TSPY10P0CW01 314 aa20.73■□□□□ 0.91
HMGCS2-201ENST00000369406 KIF15Q9NS87 1388 aa20.73■□□□□ 0.91
HMGCS2-201ENST00000369406 PLXNC1O60486 1568 aa20.73■□□□□ 0.91
HMGCS2-201ENST00000369406 ANKRD50Q9ULJ7 1429 aa20.72■□□□□ 0.91
HMGCS2-201ENST00000369406 TRIM52Q96A61 297 aa20.72■□□□□ 0.91
HMGCS2-201ENST00000369406 MAP3K4Q9Y6R4 1608 aa20.71■□□□□ 0.91
HMGCS2-201ENST00000369406 PZPP20742 1482 aa20.71■□□□□ 0.91
HMGCS2-201ENST00000369406 CD109Q6YHK3 1445 aa20.7■□□□□ 0.9
HMGCS2-201ENST00000369406 ADGRL1O94910 1474 aa20.69■□□□□ 0.9
HMGCS2-201ENST00000369406 ZFYVE16Q7Z3T8 1539 aa20.69■□□□□ 0.9
HMGCS2-201ENST00000369406 AFAP1Q8N556 730 aa20.68■□□□□ 0.9
HMGCS2-201ENST00000369406 RSPH4AQ5TD94 716 aa20.68■□□□□ 0.9
HMGCS2-201ENST00000369406 DIP2BQ9P265 1576 aa20.67■□□□□ 0.9
HMGCS2-201ENST00000369406 FOXD1Q16676 465 aa20.67■□□□□ 0.9
HMGCS2-201ENST00000369406 MPHOSPH9Q99550 1183 aa20.67■□□□□ 0.9
HMGCS2-201ENST00000369406 INO80Q9ULG1 1556 aaPredicted RBP20.66■□□□□ 0.9
HMGCS2-201ENST00000369406 SCAPERQ9BY12 1400 aa20.66■□□□□ 0.9
HMGCS2-201ENST00000369406 NEUROD1Q13562 356 aa20.65■□□□□ 0.9
HMGCS2-201ENST00000369406 GLI2P10070 1586 aa20.64■□□□□ 0.9
HMGCS2-201ENST00000369406 CFAP74Q9C0B2 1584 aa20.63■□□□□ 0.89
HMGCS2-201ENST00000369406 TSPOAP1O95153 1857 aa20.63■□□□□ 0.89
HMGCS2-201ENST00000369406 PPRC1Q5VV67 1664 aaKnown RBP20.62■□□□□ 0.89
HMGCS2-201ENST00000369406 KIDINS220Q9ULH0 1771 aa20.61■□□□□ 0.89
HMGCS2-201ENST00000369406 ATP7AQ04656 1500 aa20.61■□□□□ 0.89
HMGCS2-201ENST00000369406 KIF13AQ9H1H9 1805 aa20.61■□□□□ 0.89
HMGCS2-201ENST00000369406 KDM5DQ9BY66 1539 aa20.6■□□□□ 0.89
HMGCS2-201ENST00000369406 UNC13BO14795 1591 aa20.6■□□□□ 0.89
HMGCS2-201ENST00000369406 DUOX2Q9NRD8 1548 aa20.59■□□□□ 0.89
HMGCS2-201ENST00000369406 SPAG9O60271 1321 aaKnown RBP20.59■□□□□ 0.89
HMGCS2-201ENST00000369406 SLC4A1APQ9BWU0 796 aaKnown RBP20.57■□□□□ 0.88
HMGCS2-201ENST00000369406 RTEL1-TNFRSF6BF6WH68 1400 aa20.56■□□□□ 0.88
HMGCS2-201ENST00000369406 KDM5CP41229 1560 aa20.56■□□□□ 0.88
HMGCS2-201ENST00000369406 NUP155O75694 1391 aa20.55■□□□□ 0.88
HMGCS2-201ENST00000369406 POGZQ7Z3K3 1410 aa20.55■□□□□ 0.88
HMGCS2-201ENST00000369406 ANKRD30BQ9BXX2 1392 aa20.55■□□□□ 0.88
HMGCS2-201ENST00000369406 RICTORQ6R327 1708 aa20.54■□□□□ 0.88
HMGCS2-201ENST00000369406 NEO1Q92859 1461 aa20.54■□□□□ 0.88
HMGCS2-201ENST00000369406 FAM69CQ0P6D2 419 aa20.54■□□□□ 0.88
HMGCS2-201ENST00000369406 FAM135AQ9P2D6 1515 aa20.53■□□□□ 0.88
HMGCS2-201ENST00000369406 ERBINQ96RT1 1412 aa20.53■□□□□ 0.88
HMGCS2-201ENST00000369406 ZNF518AQ6AHZ1 1483 aa20.53■□□□□ 0.88
HMGCS2-201ENST00000369406 MAGI2Q86UL8 1455 aa20.52■□□□□ 0.87
HMGCS2-201ENST00000369406 IQGAP3Q86VI3 1631 aa20.51■□□□□ 0.87
HMGCS2-201ENST00000369406 FRMPD1Q5SYB0 1578 aa20.5■□□□□ 0.87
HMGCS2-201ENST00000369406 PKD2Q13563 968 aa20.49■□□□□ 0.87
HMGCS2-201ENST00000369406 ABCA6Q8N139 1617 aa20.49■□□□□ 0.87
HMGCS2-201ENST00000369406 HECW2Q9P2P5 1572 aa20.49■□□□□ 0.87
HMGCS2-201ENST00000369406 DEPDC5O75140 1603 aa20.49■□□□□ 0.87
HMGCS2-201ENST00000369406 RAPGEF3O95398 923 aa20.48■□□□□ 0.87
HMGCS2-201ENST00000369406 ACIN1Q9UKV3 1341 aaKnown RBP20.47■□□□□ 0.87
HMGCS2-201ENST00000369406 MROH1Q8NDA8 1641 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms