RNA–Protein interactions for RNA: ENST00000369215.4

PRDM13-202, Transcript of PR/SET domain 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM13, Length 2,429 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13-202ENST00000369215 CAMSAP2Q08AD1 1489 aa34.28■■■■□ 3.08
PRDM13-202ENST00000369215 SCAF1Q9H7N4 1312 aaKnown RBP34.27■■■■□ 3.08
PRDM13-202ENST00000369215 ROCK1Q13464 1354 aa34.26■■■■□ 3.07
PRDM13-202ENST00000369215 ABCC10Q5T3U5 1492 aa34.25■■■■□ 3.07
PRDM13-202ENST00000369215 SIN3AQ96ST3 1273 aa34.23■■■■□ 3.07
PRDM13-202ENST00000369215 CDC42BPAQ5VT25 1732 aa34.22■■■■□ 3.07
PRDM13-202ENST00000369215 KDM6BO15054 1643 aa34.19■■■■□ 3.06
PRDM13-202ENST00000369215 NEUROD1Q13562 356 aa34.19■■■■□ 3.06
PRDM13-202ENST00000369215 TIMELESSQ9UNS1 1208 aa34.19■■■■□ 3.06
PRDM13-202ENST00000369215 ABCC2Q92887 1545 aa34.18■■■■□ 3.06
PRDM13-202ENST00000369215 ZNF777Q9ULD5 760 aaPredicted RBP34.13■■■■□ 3.05
PRDM13-202ENST00000369215 CROCC2H7BZ55 1655 aa34.12■■■■□ 3.05
PRDM13-202ENST00000369215 ADGBQ8N7X0 1667 aa34.1■■■■□ 3.05
PRDM13-202ENST00000369215 ACIN1Q9UKV3 1341 aaKnown RBP34.09■■■■□ 3.05
PRDM13-202ENST00000369215 TRIM52Q96A61 297 aa34.06■■■■□ 3.04
PRDM13-202ENST00000369215 ADGRL2O95490 1459 aa34.04■■■■□ 3.04
PRDM13-202ENST00000369215 UHRF1BP1LA0JNW5 1464 aa34.02■■■■□ 3.04
PRDM13-202ENST00000369215 PREX2Q70Z35 1606 aa34■■■■□ 3.03
PRDM13-202ENST00000369215 NCOA1Q15788 1441 aa34■■■■□ 3.03
PRDM13-202ENST00000369215 DENND4BO75064 1496 aaPredicted RBP34■■■■□ 3.03
PRDM13-202ENST00000369215 SHANK2Q9UPX8 1470 aa33.97■■■■□ 3.03
PRDM13-202ENST00000369215 TONSLQ96HA7 1378 aa33.97■■■■□ 3.03
PRDM13-202ENST00000369215 CDC42BPBQ9Y5S2 1711 aa33.96■■■■□ 3.03
PRDM13-202ENST00000369215 MPHOSPH9Q99550 1183 aa33.95■■■■□ 3.03
PRDM13-202ENST00000369215 ZCCHC11Q5TAX3 1644 aaKnown RBP33.95■■■■□ 3.02
PRDM13-202ENST00000369215 ANKRD30AQ9BXX3 1397 aa33.94■■■■□ 3.02
PRDM13-202ENST00000369215 PPP1R15AO75807 674 aaPredicted RBP33.93■■■■□ 3.02
PRDM13-202ENST00000369215 ARHGEF5Q12774 1597 aa33.93■■■■□ 3.02
PRDM13-202ENST00000369215 TTC37Q6PGP7 1564 aa33.93■■■■□ 3.02
PRDM13-202ENST00000369215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.92■■■■□ 3.02
PRDM13-202ENST00000369215 KDM5BQ9UGL1 1544 aa33.92■■■■□ 3.02
PRDM13-202ENST00000369215 SAMD9LQ8IVG5 1584 aa33.9■■■■□ 3.02
PRDM13-202ENST00000369215 CENPBP07199 599 aaPredicted RBP33.9■■■■□ 3.02
PRDM13-202ENST00000369215 C9orf84Q5VXU9 1444 aa33.89■■■■□ 3.01
PRDM13-202ENST00000369215 MBD5Q9P267 1494 aa33.85■■■■□ 3.01
PRDM13-202ENST00000369215 MYO5CQ9NQX4 1742 aa33.84■■■■□ 3.01
PRDM13-202ENST00000369215 ARHGAP5Q13017 1502 aa33.82■■■■□ 3
PRDM13-202ENST00000369215 TSPY4P0CV99 314 aa33.82■■■■□ 3
PRDM13-202ENST00000369215 TSPY10P0CW01 314 aa33.82■■■■□ 3
PRDM13-202ENST00000369215 HNRNPMP52272 730 aaKnown RBP eCLIP33.82■■■■□ 3
PRDM13-202ENST00000369215 CCDC141Q6ZP82 1450 aa33.8■■■■□ 3
PRDM13-202ENST00000369215 ANKRD50Q9ULJ7 1429 aa33.79■■■■□ 3
PRDM13-202ENST00000369215 RSPH4AQ5TD94 716 aa33.77■■■■□ 3
PRDM13-202ENST00000369215 MIER1Q8N108 512 aa33.77■■■■□ 3
PRDM13-202ENST00000369215 KCNH8Q96L42 1107 aa33.77■■■■□ 3
PRDM13-202ENST00000369215 PZPP20742 1482 aa33.76■■■■□ 3
PRDM13-202ENST00000369215 SLC4A1APQ9BWU0 796 aaKnown RBP33.76■■■□□ 2.99
PRDM13-202ENST00000369215 SYCP2Q9BX26 1530 aa33.73■■■□□ 2.99
PRDM13-202ENST00000369215 ANKRD30BQ9BXX2 1392 aa33.73■■■□□ 2.99
PRDM13-202ENST00000369215 FOXD1Q16676 465 aa33.73■■■□□ 2.99
PRDM13-202ENST00000369215 PLEKHH2Q8IVE3 1493 aa33.72■■■□□ 2.99
PRDM13-202ENST00000369215 OSCARQ8IYS5 282 aa33.71■■■□□ 2.99
PRDM13-202ENST00000369215 KIF15Q9NS87 1388 aa33.69■■■□□ 2.98
PRDM13-202ENST00000369215 PLCH2O75038 1416 aa33.69■■■□□ 2.98
PRDM13-202ENST00000369215 KIAA1107Q9UPP5 1409 aa33.68■■■□□ 2.98
PRDM13-202ENST00000369215 MAST1Q9Y2H9 1570 aa33.67■■■□□ 2.98
PRDM13-202ENST00000369215 RPRD2Q5VT52 1461 aaKnown RBP33.65■■■□□ 2.98
PRDM13-202ENST00000369215 WDR7Q9Y4E6 1490 aa33.6■■■□□ 2.97
PRDM13-202ENST00000369215 KDM5DQ9BY66 1539 aa33.6■■■□□ 2.97
PRDM13-202ENST00000369215 GTF3C3Q9Y5Q9 886 aa33.59■■■□□ 2.97
PRDM13-202ENST00000369215 EFCAB2Q5VUJ9 269 aa33.59■■■□□ 2.97
PRDM13-202ENST00000369215 ARAP3Q8WWN8 1544 aa33.56■■■□□ 2.96
PRDM13-202ENST00000369215 NUP155O75694 1391 aa33.56■■■□□ 2.96
PRDM13-202ENST00000369215 ARHGEF12Q9NZN5 1544 aa33.55■■■□□ 2.96
PRDM13-202ENST00000369215 PLXNC1O60486 1568 aa33.54■■■□□ 2.96
PRDM13-202ENST00000369215 ABCC1P33527 1531 aa33.54■■■□□ 2.96
PRDM13-202ENST00000369215 L3MBTL2Q969R5 705 aa33.53■■■□□ 2.96
PRDM13-202ENST00000369215 PKD2Q13563 968 aa33.53■■■□□ 2.96
PRDM13-202ENST00000369215 TEX14Q8IWB6 1497 aa33.51■■■□□ 2.96
PRDM13-202ENST00000369215 ABCA9Q8IUA7 1624 aa33.46■■■□□ 2.95
PRDM13-202ENST00000369215 ASXL2Q76L83 1435 aa33.44■■■□□ 2.94
PRDM13-202ENST00000369215 HIRIP3Q9BW71 556 aaPredicted RBP33.44■■■□□ 2.94
PRDM13-202ENST00000369215 YTHDC1Q96MU7 727 aaKnown RBP33.42■■■□□ 2.94
PRDM13-202ENST00000369215 DUOX2Q9NRD8 1548 aa33.41■■■□□ 2.94
PRDM13-202ENST00000369215 UNC13BO14795 1591 aa33.41■■■□□ 2.94
PRDM13-202ENST00000369215 TRAPPC8Q9Y2L5 1435 aa33.4■■■□□ 2.94
PRDM13-202ENST00000369215 FAM135AQ9P2D6 1515 aa33.38■■■□□ 2.93
PRDM13-202ENST00000369215 DDX10Q13206 875 aaKnown RBP33.36■■■□□ 2.93
PRDM13-202ENST00000369215 NPM1P06748 294 aaKnown RBP eCLIP33.34■■■□□ 2.93
PRDM13-202ENST00000369215 FANCAO15360 1455 aa33.34■■■□□ 2.93
PRDM13-202ENST00000369215 ERBINQ96RT1 1412 aa33.34■■■□□ 2.93
PRDM13-202ENST00000369215 MYT1Q01538 1121 aa33.32■■■□□ 2.92
PRDM13-202ENST00000369215 NBPF8Q3BBV2 869 aa33.3■■■□□ 2.92
PRDM13-202ENST00000369215 RTEL1-TNFRSF6BF6WH68 1400 aa33.3■■■□□ 2.92
PRDM13-202ENST00000369215 SPAG9O60271 1321 aaKnown RBP33.28■■■□□ 2.92
PRDM13-202ENST00000369215 IQGAP3Q86VI3 1631 aa33.27■■■□□ 2.92
PRDM13-202ENST00000369215 HSPA5P11021 654 aaKnown RBP33.27■■■□□ 2.92
PRDM13-202ENST00000369215 EIF4G2P78344 907 aaKnown RBP eCLIP33.27■■■□□ 2.92
PRDM13-202ENST00000369215 ZFYVE16Q7Z3T8 1539 aa33.26■■■□□ 2.92
PRDM13-202ENST00000369215 MAGI2Q86UL8 1455 aa33.25■■■□□ 2.91
PRDM13-202ENST00000369215 AFAP1Q8N556 730 aa33.23■■■□□ 2.91
PRDM13-202ENST00000369215 ADGRL1O94910 1474 aa33.22■■■□□ 2.91
PRDM13-202ENST00000369215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.21■■■□□ 2.91
PRDM13-202ENST00000369215 INO80Q9ULG1 1556 aaPredicted RBP33.19■■■□□ 2.9
PRDM13-202ENST00000369215 SCAPERQ9BY12 1400 aa33.17■■■□□ 2.9
PRDM13-202ENST00000369215 ATP7AQ04656 1500 aa33.16■■■□□ 2.9
PRDM13-202ENST00000369215 UHRF1BP1Q6BDS2 1440 aa33.12■■■□□ 2.89
PRDM13-202ENST00000369215 CCDC144AA2RUR9 1427 aa33.1■■■□□ 2.89
PRDM13-202ENST00000369215 CFAP74Q9C0B2 1584 aa33.09■■■□□ 2.89
PRDM13-202ENST00000369215 CD109Q6YHK3 1445 aa33.08■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms