RNA–Protein interactions for RNA: ENST00000368936.5

PRUNE1-204, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 1 (best) BASIC

Gene PRUNE1, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-204ENST00000368936 NUP153P49790 1475 aaKnown RBP13.54□□□□□ -0.24
PRUNE1-204ENST00000368936 TCOF1Q13428 1488 aaKnown RBP13.52□□□□□ -0.25
PRUNE1-204ENST00000368936 ZNF777Q9ULD5 760 aaPredicted RBP13.52□□□□□ -0.25
PRUNE1-204ENST00000368936 MPHOSPH9Q99550 1183 aa13.51□□□□□ -0.25
PRUNE1-204ENST00000368936 FKBP8Q14318 412 aa13.5□□□□□ -0.25
PRUNE1-204ENST00000368936 HSPA5P11021 654 aaKnown RBP13.49□□□□□ -0.25
PRUNE1-204ENST00000368936 CNGB1Q14028 1251 aaPredicted RBP13.49□□□□□ -0.25
PRUNE1-204ENST00000368936 RAPGEF6Q8TEU7 1601 aa13.49□□□□□ -0.25
PRUNE1-204ENST00000368936 DAPK1P53355 1430 aa13.48□□□□□ -0.25
PRUNE1-204ENST00000368936 CARMIL2Q6F5E8 1435 aa13.48□□□□□ -0.25
PRUNE1-204ENST00000368936 L3MBTL2Q969R5 705 aa13.48□□□□□ -0.25
PRUNE1-204ENST00000368936 WASHC2AQ641Q2 1341 aa13.47□□□□□ -0.25
PRUNE1-204ENST00000368936 MIA2Q96PC5 1412 aa13.46□□□□□ -0.26
PRUNE1-204ENST00000368936 ABCC5O15440 1437 aa13.45□□□□□ -0.26
PRUNE1-204ENST00000368936 KIF14Q15058 1648 aa13.45□□□□□ -0.26
PRUNE1-204ENST00000368936 SLC4A1APQ9BWU0 796 aaKnown RBP13.44□□□□□ -0.26
PRUNE1-204ENST00000368936 PTPRGP23470 1445 aa13.44□□□□□ -0.26
PRUNE1-204ENST00000368936 ZNF326Q5BKZ1 582 aaKnown RBP13.43□□□□□ -0.26
PRUNE1-204ENST00000368936 DNMT1P26358 1616 aaKnown RBP13.43□□□□□ -0.26
PRUNE1-204ENST00000368936 C11orf95C9JLR9 678 aaPredicted RBP13.43□□□□□ -0.26
PRUNE1-204ENST00000368936 NBPF8Q3BBV2 869 aa13.42□□□□□ -0.26
PRUNE1-204ENST00000368936 CFDP1Q9UEE9 299 aaPredicted RBP13.42□□□□□ -0.26
PRUNE1-204ENST00000368936 CLASP1Q7Z460 1538 aa13.41□□□□□ -0.26
PRUNE1-204ENST00000368936 CCER2I3L3R5 266 aa13.41□□□□□ -0.26
PRUNE1-204ENST00000368936 HNRNPUQ00839 825 aaKnown RBP eCLIP13.41□□□□□ -0.26
PRUNE1-204ENST00000368936 CCDC184Q52MB2 194 aa13.41□□□□□ -0.26
PRUNE1-204ENST00000368936 SHROOM2Q13796 1616 aa13.41□□□□□ -0.26
PRUNE1-204ENST00000368936 EIF4G2P78344 907 aaKnown RBP eCLIP13.41□□□□□ -0.26
PRUNE1-204ENST00000368936 IRX6P78412 446 aaPredicted RBP13.41□□□□□ -0.26
PRUNE1-204ENST00000368936 ABCA8O94911 1581 aa13.4□□□□□ -0.26
PRUNE1-204ENST00000368936 ATP10BO94823 1461 aa13.4□□□□□ -0.26
PRUNE1-204ENST00000368936 CAMSAP2Q08AD1 1489 aa13.4□□□□□ -0.26
PRUNE1-204ENST00000368936 AKNAQ7Z591 1439 aa13.4□□□□□ -0.26
PRUNE1-204ENST00000368936 POLR3GLQ9BT43 218 aa13.4□□□□□ -0.26
PRUNE1-204ENST00000368936 TSHZ2Q9NRE2 1034 aa13.4□□□□□ -0.26
PRUNE1-204ENST00000368936 CDK11AQ9UQ88 783 aaPredicted RBP13.39□□□□□ -0.27
PRUNE1-204ENST00000368936 SENP3-EIF4A1A0A087X0R7 540 aa13.37□□□□□ -0.27
PRUNE1-204ENST00000368936 TROQ12816 1431 aaPredicted RBP13.37□□□□□ -0.27
PRUNE1-204ENST00000368936 ANKRD30BQ9BXX2 1392 aa13.37□□□□□ -0.27
PRUNE1-204ENST00000368936 NEFLP07196 543 aa13.36□□□□□ -0.27
PRUNE1-204ENST00000368936 TEX14Q8IWB6 1497 aa13.36□□□□□ -0.27
PRUNE1-204ENST00000368936 RPRD2Q5VT52 1461 aaKnown RBP13.35□□□□□ -0.27
PRUNE1-204ENST00000368936 GPATCH8Q9UKJ3 1502 aaKnown RBP13.35□□□□□ -0.27
PRUNE1-204ENST00000368936 FAM9BQ8IZU0 186 aa13.34□□□□□ -0.27
PRUNE1-204ENST00000368936 ROCK1Q13464 1354 aa13.34□□□□□ -0.27
PRUNE1-204ENST00000368936 ITSN2Q9NZM3 1697 aa13.33□□□□□ -0.28
PRUNE1-204ENST00000368936 PZPP20742 1482 aa13.33□□□□□ -0.28
PRUNE1-204ENST00000368936 CNTLNQ9NXG0 1405 aa13.32□□□□□ -0.28
PRUNE1-204ENST00000368936 PLEKHD1A6NEE1 506 aa13.32□□□□□ -0.28
PRUNE1-204ENST00000368936 OSCARQ8IYS5 282 aa13.32□□□□□ -0.28
PRUNE1-204ENST00000368936 NCOA1Q15788 1441 aa13.32□□□□□ -0.28
PRUNE1-204ENST00000368936 CCDC7Q96M83 1385 aa13.31□□□□□ -0.28
PRUNE1-204ENST00000368936 PKD2Q13563 968 aa13.31□□□□□ -0.28
PRUNE1-204ENST00000368936 ADGBQ8N7X0 1667 aa13.31□□□□□ -0.28
PRUNE1-204ENST00000368936 CDC42BPAQ5VT25 1732 aa13.31□□□□□ -0.28
PRUNE1-204ENST00000368936 CROCC2H7BZ55 1655 aa13.3□□□□□ -0.28
PRUNE1-204ENST00000368936 KIF7Q2M1P5 1343 aa13.29□□□□□ -0.28
PRUNE1-204ENST00000368936 AEBP2Q6ZN18 517 aaPredicted RBP13.28□□□□□ -0.28
PRUNE1-204ENST00000368936 MRS2Q9HD23 443 aa13.28□□□□□ -0.28
PRUNE1-204ENST00000368936 HNRNPMP52272 730 aaKnown RBP eCLIP13.28□□□□□ -0.28
PRUNE1-204ENST00000368936 PRKRIP1Q9H875 184 aaPredicted RBP13.27□□□□□ -0.28
PRUNE1-204ENST00000368936 KDM2AQ9Y2K7 1162 aa13.26□□□□□ -0.29
PRUNE1-204ENST00000368936 ADCY10Q96PN6 1610 aa13.26□□□□□ -0.29
PRUNE1-204ENST00000368936 ANKRD50Q9ULJ7 1429 aa13.26□□□□□ -0.29
PRUNE1-204ENST00000368936 ABCC2Q92887 1545 aa13.26□□□□□ -0.29
PRUNE1-204ENST00000368936 NUP155O75694 1391 aa13.25□□□□□ -0.29
PRUNE1-204ENST00000368936 ANKRD30AQ9BXX3 1397 aa13.25□□□□□ -0.29
PRUNE1-204ENST00000368936 ABCC10Q5T3U5 1492 aa13.25□□□□□ -0.29
PRUNE1-204ENST00000368936 KIAA1107Q9UPP5 1409 aa13.24□□□□□ -0.29
PRUNE1-204ENST00000368936 BCORL1Q5H9F3 1711 aa13.24□□□□□ -0.29
PRUNE1-204ENST00000368936 C9orf84Q5VXU9 1444 aa13.24□□□□□ -0.29
PRUNE1-204ENST00000368936 USP47Q96K76 1375 aa13.23□□□□□ -0.29
PRUNE1-204ENST00000368936 SPATA31E1Q6ZUB1 1445 aa13.22□□□□□ -0.29
PRUNE1-204ENST00000368936 ZCCHC11Q5TAX3 1644 aaKnown RBP13.22□□□□□ -0.29
PRUNE1-204ENST00000368936 TTC37Q6PGP7 1564 aa13.22□□□□□ -0.29
PRUNE1-204ENST00000368936 ADGRL2O95490 1459 aa13.21□□□□□ -0.3
PRUNE1-204ENST00000368936 POLR1AO95602 1720 aaPredicted RBP13.2□□□□□ -0.3
PRUNE1-204ENST00000368936 TSPY4P0CV99 314 aa13.2□□□□□ -0.3
PRUNE1-204ENST00000368936 TSPY10P0CW01 314 aa13.2□□□□□ -0.3
PRUNE1-204ENST00000368936 KIF15Q9NS87 1388 aa13.19□□□□□ -0.3
PRUNE1-204ENST00000368936 MBD5Q9P267 1494 aa13.19□□□□□ -0.3
PRUNE1-204ENST00000368936 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.19□□□□□ -0.3
PRUNE1-204ENST00000368936 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.18□□□□□ -0.3
PRUNE1-204ENST00000368936 DCAF11Q8TEB1 546 aa13.18□□□□□ -0.3
PRUNE1-204ENST00000368936 CDC42BPBQ9Y5S2 1711 aa13.18□□□□□ -0.3
PRUNE1-204ENST00000368936 CARD11Q9BXL7 1154 aa13.17□□□□□ -0.3
PRUNE1-204ENST00000368936 RGL3Q3MIN7 710 aa13.17□□□□□ -0.3
PRUNE1-204ENST00000368936 KDM5CP41229 1560 aa13.16□□□□□ -0.3
PRUNE1-204ENST00000368936 SAMD9LQ8IVG5 1584 aa13.16□□□□□ -0.3
PRUNE1-204ENST00000368936 CYB5RLQ6IPT4 315 aa13.15□□□□□ -0.3
PRUNE1-204ENST00000368936 RBM19Q9Y4C8 960 aaKnown RBP13.15□□□□□ -0.3
PRUNE1-204ENST00000368936 SYCP2Q9BX26 1530 aa13.14□□□□□ -0.31
PRUNE1-204ENST00000368936 UHRF1BP1LA0JNW5 1464 aa13.14□□□□□ -0.31
PRUNE1-204ENST00000368936 ST20-MTHFSA0A0A6YYL1 179 aa13.14□□□□□ -0.31
PRUNE1-204ENST00000368936 DHX29Q7Z478 1369 aaKnown RBP13.13□□□□□ -0.31
PRUNE1-204ENST00000368936 ARHGAP5Q13017 1502 aa13.12□□□□□ -0.31
PRUNE1-204ENST00000368936 B4GALNT3Q6L9W6 998 aa13.12□□□□□ -0.31
PRUNE1-204ENST00000368936 SHANK2Q9UPX8 1470 aa13.11□□□□□ -0.31
PRUNE1-204ENST00000368936 PREX2Q70Z35 1606 aa13.11□□□□□ -0.31
PRUNE1-204ENST00000368936 ARHGEF12Q9NZN5 1544 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms