RNA–Protein interactions for RNA: ENST00000368935.1

PRUNE1-203, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 1 (best) BASIC

Gene PRUNE1, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-203ENST00000368935 MPHOSPH9Q99550 1183 aa13.91□□□□□ -0.18
PRUNE1-203ENST00000368935 WASHC2AQ641Q2 1341 aa13.91□□□□□ -0.18
PRUNE1-203ENST00000368935 EIF4G3O43432 1585 aaKnown RBP13.9□□□□□ -0.18
PRUNE1-203ENST00000368935 ABCC5O15440 1437 aa13.88□□□□□ -0.19
PRUNE1-203ENST00000368935 GRIN2AQ12879 1464 aa13.88□□□□□ -0.19
PRUNE1-203ENST00000368935 RPRD2Q5VT52 1461 aaKnown RBP13.88□□□□□ -0.19
PRUNE1-203ENST00000368935 TEX14Q8IWB6 1497 aa13.88□□□□□ -0.19
PRUNE1-203ENST00000368935 CNTLNQ9NXG0 1405 aa13.88□□□□□ -0.19
PRUNE1-203ENST00000368935 EIF4G2P78344 907 aaKnown RBP eCLIP13.88□□□□□ -0.19
PRUNE1-203ENST00000368935 POLR1AO95602 1720 aaPredicted RBP13.87□□□□□ -0.19
PRUNE1-203ENST00000368935 ITSN2Q9NZM3 1697 aa13.87□□□□□ -0.19
PRUNE1-203ENST00000368935 ADGBQ8N7X0 1667 aa13.87□□□□□ -0.19
PRUNE1-203ENST00000368935 L3MBTL2Q969R5 705 aa13.86□□□□□ -0.19
PRUNE1-203ENST00000368935 ANKRD30BQ9BXX2 1392 aa13.86□□□□□ -0.19
PRUNE1-203ENST00000368935 FOXD1Q16676 465 aa13.86□□□□□ -0.19
PRUNE1-203ENST00000368935 NCOA1Q15788 1441 aa13.85□□□□□ -0.19
PRUNE1-203ENST00000368935 CROCC2H7BZ55 1655 aa13.84□□□□□ -0.19
PRUNE1-203ENST00000368935 HNRNPUQ00839 825 aaKnown RBP eCLIP13.83□□□□□ -0.2
PRUNE1-203ENST00000368935 ADCY10Q96PN6 1610 aa13.83□□□□□ -0.2
PRUNE1-203ENST00000368935 CAMSAP2Q08AD1 1489 aa13.83□□□□□ -0.2
PRUNE1-203ENST00000368935 ZNF644Q9H582 1327 aaPredicted RBP13.83□□□□□ -0.2
PRUNE1-203ENST00000368935 CCDC7Q96M83 1385 aa13.82□□□□□ -0.2
PRUNE1-203ENST00000368935 TROQ12816 1431 aaPredicted RBP13.82□□□□□ -0.2
PRUNE1-203ENST00000368935 CDK11AQ9UQ88 783 aaPredicted RBP13.82□□□□□ -0.2
PRUNE1-203ENST00000368935 KIF14Q15058 1648 aa13.81□□□□□ -0.2
PRUNE1-203ENST00000368935 CEP170Q5SW79 1584 aa13.81□□□□□ -0.2
PRUNE1-203ENST00000368935 PRG4Q92954 1404 aaPredicted RBP13.8□□□□□ -0.2
PRUNE1-203ENST00000368935 PZPP20742 1482 aa13.8□□□□□ -0.2
PRUNE1-203ENST00000368935 MAGI1Q96QZ7 1491 aaPredicted RBP13.8□□□□□ -0.2
PRUNE1-203ENST00000368935 NBPF8Q3BBV2 869 aa13.79□□□□□ -0.2
PRUNE1-203ENST00000368935 SLC4A1APQ9BWU0 796 aaKnown RBP13.79□□□□□ -0.2
PRUNE1-203ENST00000368935 PLB1Q6P1J6 1458 aa13.78□□□□□ -0.2
PRUNE1-203ENST00000368935 SPATA31E1Q6ZUB1 1445 aa13.78□□□□□ -0.2
PRUNE1-203ENST00000368935 C11orf95C9JLR9 678 aaPredicted RBP13.78□□□□□ -0.2
PRUNE1-203ENST00000368935 ADGRL2O95490 1459 aa13.78□□□□□ -0.2
PRUNE1-203ENST00000368935 GPATCH8Q9UKJ3 1502 aaKnown RBP13.77□□□□□ -0.21
PRUNE1-203ENST00000368935 SYNJ2O15056 1496 aa13.76□□□□□ -0.21
PRUNE1-203ENST00000368935 MBD5Q9P267 1494 aa13.76□□□□□ -0.21
PRUNE1-203ENST00000368935 PRKRIP1Q9H875 184 aaPredicted RBP13.75□□□□□ -0.21
PRUNE1-203ENST00000368935 CFDP1Q9UEE9 299 aaPredicted RBP13.75□□□□□ -0.21
PRUNE1-203ENST00000368935 CCDC184Q52MB2 194 aa13.74□□□□□ -0.21
PRUNE1-203ENST00000368935 KIF7Q2M1P5 1343 aa13.74□□□□□ -0.21
PRUNE1-203ENST00000368935 CDC42BPAQ5VT25 1732 aa13.74□□□□□ -0.21
PRUNE1-203ENST00000368935 KIAA1107Q9UPP5 1409 aa13.73□□□□□ -0.21
PRUNE1-203ENST00000368935 ERCC6Q03468 1493 aa13.72□□□□□ -0.21
PRUNE1-203ENST00000368935 CARMIL2Q6F5E8 1435 aa13.72□□□□□ -0.21
PRUNE1-203ENST00000368935 ANP32EQ9BTT0 268 aa13.71□□□□□ -0.21
PRUNE1-203ENST00000368935 CHMP7Q8WUX9 453 aaPredicted RBP13.71□□□□□ -0.22
PRUNE1-203ENST00000368935 RBM19Q9Y4C8 960 aaKnown RBP13.71□□□□□ -0.22
PRUNE1-203ENST00000368935 NUP160Q12769 1436 aa13.7□□□□□ -0.22
PRUNE1-203ENST00000368935 ANKRD30AQ9BXX3 1397 aa13.7□□□□□ -0.22
PRUNE1-203ENST00000368935 MRS2Q9HD23 443 aa13.7□□□□□ -0.22
PRUNE1-203ENST00000368935 BCORL1Q5H9F3 1711 aa13.7□□□□□ -0.22
PRUNE1-203ENST00000368935 SHANK2Q9UPX8 1470 aa13.69□□□□□ -0.22
PRUNE1-203ENST00000368935 IRX6P78412 446 aaPredicted RBP13.69□□□□□ -0.22
PRUNE1-203ENST00000368935 ZNF777Q9ULD5 760 aaPredicted RBP13.69□□□□□ -0.22
PRUNE1-203ENST00000368935 KDM5CP41229 1560 aa13.69□□□□□ -0.22
PRUNE1-203ENST00000368935 ABCA8O94911 1581 aa13.68□□□□□ -0.22
PRUNE1-203ENST00000368935 ANKRD50Q9ULJ7 1429 aa13.68□□□□□ -0.22
PRUNE1-203ENST00000368935 FAM9BQ8IZU0 186 aa13.68□□□□□ -0.22
PRUNE1-203ENST00000368935 ZBED9Q6R2W3 1325 aa13.68□□□□□ -0.22
PRUNE1-203ENST00000368935 USP47Q96K76 1375 aa13.67□□□□□ -0.22
PRUNE1-203ENST00000368935 ABCC10Q5T3U5 1492 aa13.67□□□□□ -0.22
PRUNE1-203ENST00000368935 PKD2Q13563 968 aa13.66□□□□□ -0.22
PRUNE1-203ENST00000368935 C9orf84Q5VXU9 1444 aa13.65□□□□□ -0.22
PRUNE1-203ENST00000368935 FBLN2P98095 1184 aa13.65□□□□□ -0.22
PRUNE1-203ENST00000368935 ERICH6BQ5W0A0 696 aa13.65□□□□□ -0.22
PRUNE1-203ENST00000368935 KDM5DQ9BY66 1539 aa13.65□□□□□ -0.22
PRUNE1-203ENST00000368935 DHX29Q7Z478 1369 aaKnown RBP13.65□□□□□ -0.23
PRUNE1-203ENST00000368935 ARHGEF12Q9NZN5 1544 aa13.64□□□□□ -0.23
PRUNE1-203ENST00000368935 JPH4Q96JJ6 628 aa13.64□□□□□ -0.23
PRUNE1-203ENST00000368935 RALGAPBQ86X10 1494 aa13.64□□□□□ -0.23
PRUNE1-203ENST00000368935 UHRF1BP1Q6BDS2 1440 aa13.63□□□□□ -0.23
PRUNE1-203ENST00000368935 ZNF326Q5BKZ1 582 aaKnown RBP13.63□□□□□ -0.23
PRUNE1-203ENST00000368935 ATP10BO94823 1461 aa13.63□□□□□ -0.23
PRUNE1-203ENST00000368935 ARHGEF5Q12774 1597 aa13.62□□□□□ -0.23
PRUNE1-203ENST00000368935 PLEKHD1A6NEE1 506 aa13.6□□□□□ -0.23
PRUNE1-203ENST00000368935 PPP4R2Q9NY27 417 aa13.6□□□□□ -0.23
PRUNE1-203ENST00000368935 NUP155O75694 1391 aa13.6□□□□□ -0.23
PRUNE1-203ENST00000368935 ARID4BQ4LE39 1312 aaPredicted RBP13.6□□□□□ -0.23
PRUNE1-203ENST00000368935 PREX2Q70Z35 1606 aa13.58□□□□□ -0.24
PRUNE1-203ENST00000368935 PTPRGP23470 1445 aa13.58□□□□□ -0.24
PRUNE1-203ENST00000368935 KIF15Q9NS87 1388 aa13.58□□□□□ -0.24
PRUNE1-203ENST00000368935 POLR3GLQ9BT43 218 aa13.58□□□□□ -0.24
PRUNE1-203ENST00000368935 ROCK2O75116 1388 aaKnown RBP13.57□□□□□ -0.24
PRUNE1-203ENST00000368935 CDC42BPBQ9Y5S2 1711 aa13.57□□□□□ -0.24
PRUNE1-203ENST00000368935 SAMD9LQ8IVG5 1584 aa13.56□□□□□ -0.24
PRUNE1-203ENST00000368935 E9PCH4 1651 aa13.56□□□□□ -0.24
PRUNE1-203ENST00000368935 SMG6Q86US8 1419 aaKnown RBP13.56□□□□□ -0.24
PRUNE1-203ENST00000368935 CCDC141Q6ZP82 1450 aa13.55□□□□□ -0.24
PRUNE1-203ENST00000368935 TSPY4P0CV99 314 aa13.55□□□□□ -0.24
PRUNE1-203ENST00000368935 TSPY10P0CW01 314 aa13.55□□□□□ -0.24
PRUNE1-203ENST00000368935 CARD11Q9BXL7 1154 aa13.54□□□□□ -0.24
PRUNE1-203ENST00000368935 FANCIQ9NVI1 1328 aa13.54□□□□□ -0.24
PRUNE1-203ENST00000368935 FAM135AQ9P2D6 1515 aa13.53□□□□□ -0.24
PRUNE1-203ENST00000368935 CNGB1Q14028 1251 aaPredicted RBP13.53□□□□□ -0.24
PRUNE1-203ENST00000368935 HNRNPMP52272 730 aaKnown RBP eCLIP13.51□□□□□ -0.25
PRUNE1-203ENST00000368935 TRPM1Q7Z4N2 1603 aa13.51□□□□□ -0.25
PRUNE1-203ENST00000368935 B4GALNT3Q6L9W6 998 aa13.51□□□□□ -0.25
PRUNE1-203ENST00000368935 UNC13BO14795 1591 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms