RNA–Protein interactions for RNA: ENST00000368902.1

SCNM1-201, Transcript of sodium channel modifier 1, humanhuman

TSL 2 BASIC

Gene SCNM1, Length 869 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-201ENST00000368902 MAGI2Q86UL8 1455 aa14.23□□□□□ -0.13
SCNM1-201ENST00000368902 HECW1Q76N89 1606 aa14.23□□□□□ -0.13
SCNM1-201ENST00000368902 FOXD1Q16676 465 aa14.21□□□□□ -0.13
SCNM1-201ENST00000368902 ATP1B4Q9UN42 357 aaPredicted RBP14.21□□□□□ -0.13
SCNM1-201ENST00000368902 HSPA2P54652 639 aa14.19□□□□□ -0.14
SCNM1-201ENST00000368902 ARHGAP35Q9NRY4 1499 aa14.18□□□□□ -0.14
SCNM1-201ENST00000368902 PLPPR3Q6T4P5 718 aa14.18□□□□□ -0.14
SCNM1-201ENST00000368902 ARHGEF12Q9NZN5 1544 aa14.17□□□□□ -0.14
SCNM1-201ENST00000368902 MYO5CQ9NQX4 1742 aa14.17□□□□□ -0.14
SCNM1-201ENST00000368902 C9orf84Q5VXU9 1444 aa14.16□□□□□ -0.14
SCNM1-201ENST00000368902 SCAPERQ9BY12 1400 aa14.16□□□□□ -0.14
SCNM1-201ENST00000368902 PREX1Q8TCU6 1659 aa14.16□□□□□ -0.14
SCNM1-201ENST00000368902 PLCH2O75038 1416 aa14.15□□□□□ -0.14
SCNM1-201ENST00000368902 FMN1Q68DA7 1419 aa14.15□□□□□ -0.14
SCNM1-201ENST00000368902 KIF14Q15058 1648 aa14.15□□□□□ -0.14
SCNM1-201ENST00000368902 MLECQ14165 292 aa14.14□□□□□ -0.15
SCNM1-201ENST00000368902 LOC105371045A0A1W2PR82 267 aa14.13□□□□□ -0.15
SCNM1-201ENST00000368902 ATP10AO60312 1499 aa14.12□□□□□ -0.15
SCNM1-201ENST00000368902 ZNF518AQ6AHZ1 1483 aa14.12□□□□□ -0.15
SCNM1-201ENST00000368902 KDM5CP41229 1560 aa14.12□□□□□ -0.15
SCNM1-201ENST00000368902 CDK11AQ9UQ88 783 aaPredicted RBP14.11□□□□□ -0.15
SCNM1-201ENST00000368902 ARHGAP5Q13017 1502 aa14.1□□□□□ -0.15
SCNM1-201ENST00000368902 CLIP1P30622 1438 aa14.1□□□□□ -0.15
SCNM1-201ENST00000368902 DIP2CQ9Y2E4 1556 aa14.09□□□□□ -0.15
SCNM1-201ENST00000368902 CERKQ8TCT0 537 aa14.08□□□□□ -0.16
SCNM1-201ENST00000368902 TROQ12816 1431 aaPredicted RBP14.07□□□□□ -0.16
SCNM1-201ENST00000368902 EFCAB2Q5VUJ9 269 aa14.07□□□□□ -0.16
SCNM1-201ENST00000368902 REREQ9P2R6 1566 aa14.07□□□□□ -0.16
SCNM1-201ENST00000368902 ABCA6Q8N139 1617 aa14.07□□□□□ -0.16
SCNM1-201ENST00000368902 UHRF1BP1Q6BDS2 1440 aa14.07□□□□□ -0.16
SCNM1-201ENST00000368902 PREX2Q70Z35 1606 aa14.04□□□□□ -0.16
SCNM1-201ENST00000368902 ABCC1P33527 1531 aa14.04□□□□□ -0.16
SCNM1-201ENST00000368902 CASKIN1Q8WXD9 1431 aa14.03□□□□□ -0.16
SCNM1-201ENST00000368902 LRRIQ1Q96JM4 1722 aa14.03□□□□□ -0.16
SCNM1-201ENST00000368902 STRCQ7RTU9 1775 aa14.02□□□□□ -0.16
SCNM1-201ENST00000368902 ITSN2Q9NZM3 1697 aa14.01□□□□□ -0.17
SCNM1-201ENST00000368902 CEBPAP49715 358 aaPredicted RBP14.01□□□□□ -0.17
SCNM1-201ENST00000368902 C3P01024 1663 aa14.01□□□□□ -0.17
SCNM1-201ENST00000368902 MLH3Q9UHC1 1453 aa14□□□□□ -0.17
SCNM1-201ENST00000368902 CEP162Q5TB80 1403 aa14□□□□□ -0.17
SCNM1-201ENST00000368902 CDC42BPBQ9Y5S2 1711 aa14□□□□□ -0.17
SCNM1-201ENST00000368902 AGLP35573 1532 aa14□□□□□ -0.17
SCNM1-201ENST00000368902 CCDC18Q5T9S5 1454 aa13.99□□□□□ -0.17
SCNM1-201ENST00000368902 SETD1BQ9UPS6 1966 aaKnown RBP13.98□□□□□ -0.17
SCNM1-201ENST00000368902 AFAP1Q8N556 730 aa13.98□□□□□ -0.17
SCNM1-201ENST00000368902 MYT1LQ9UL68 1186 aa13.98□□□□□ -0.17
SCNM1-201ENST00000368902 SPATA31D1Q6ZQQ2 1576 aa13.97□□□□□ -0.17
SCNM1-201ENST00000368902 TRAPPC8Q9Y2L5 1435 aa13.97□□□□□ -0.17
SCNM1-201ENST00000368902 DMRT2Q9Y5R5 561 aa13.96□□□□□ -0.17
SCNM1-201ENST00000368902 KIDINS220Q9ULH0 1771 aa13.95□□□□□ -0.18
SCNM1-201ENST00000368902 PTPRTO14522 1441 aa13.95□□□□□ -0.18
SCNM1-201ENST00000368902 CNTLNQ9NXG0 1405 aa13.95□□□□□ -0.18
SCNM1-201ENST00000368902 DISP3Q9P2K9 1392 aa13.95□□□□□ -0.18
SCNM1-201ENST00000368902 FYCO1Q9BQS8 1478 aa13.94□□□□□ -0.18
SCNM1-201ENST00000368902 CDC42BPAQ5VT25 1732 aa13.93□□□□□ -0.18
SCNM1-201ENST00000368902 NCOA1Q15788 1441 aa13.93□□□□□ -0.18
SCNM1-201ENST00000368902 SYCP2Q9BX26 1530 aa13.93□□□□□ -0.18
SCNM1-201ENST00000368902 MROH2AA6NES4 1674 aa13.92□□□□□ -0.18
SCNM1-201ENST00000368902 ESF1Q9H501 851 aaKnown RBP13.92□□□□□ -0.18
SCNM1-201ENST00000368902 LTBP4Q8N2S1 1624 aa13.92□□□□□ -0.18
SCNM1-201ENST00000368902 SAMD9LQ8IVG5 1584 aa13.92□□□□□ -0.18
SCNM1-201ENST00000368902 IQSEC2Q5JU85 1478 aa13.91□□□□□ -0.18
SCNM1-201ENST00000368902 NPATQ14207 1427 aa13.9□□□□□ -0.19
SCNM1-201ENST00000368902 CAMSAP1Q5T5Y3 1602 aa13.89□□□□□ -0.19
SCNM1-201ENST00000368902 MYO3AQ8NEV4 1616 aa13.89□□□□□ -0.19
SCNM1-201ENST00000368902 ZNF142P52746 1687 aaPredicted RBP13.88□□□□□ -0.19
SCNM1-201ENST00000368902 PLXNC1O60486 1568 aa13.88□□□□□ -0.19
SCNM1-201ENST00000368902 INO80Q9ULG1 1556 aaPredicted RBP13.88□□□□□ -0.19
SCNM1-201ENST00000368902 MTUS2Q5JR59 1369 aa13.88□□□□□ -0.19
SCNM1-201ENST00000368902 ATP7AQ04656 1500 aa13.88□□□□□ -0.19
SCNM1-201ENST00000368902 ILDR2Q71H61 639 aa13.86□□□□□ -0.19
SCNM1-201ENST00000368902 SUPT6HQ7KZ85 1726 aaKnown RBP13.85□□□□□ -0.19
SCNM1-201ENST00000368902 CLTCQ00610 1675 aaKnown RBP13.85□□□□□ -0.19
SCNM1-201ENST00000368902 CEP170BQ9Y4F5 1589 aaPredicted RBP13.84□□□□□ -0.19
SCNM1-201ENST00000368902 ZNF777Q9ULD5 760 aaPredicted RBP13.84□□□□□ -0.19
SCNM1-201ENST00000368902 GPATCH8Q9UKJ3 1502 aaKnown RBP13.84□□□□□ -0.19
SCNM1-201ENST00000368902 VPS8Q8N3P4 1428 aa13.83□□□□□ -0.2
SCNM1-201ENST00000368902 PLA2R1Q13018 1463 aa13.83□□□□□ -0.2
SCNM1-201ENST00000368902 PLEKHH2Q8IVE3 1493 aa13.83□□□□□ -0.2
SCNM1-201ENST00000368902 SOCS7O14512 581 aa13.83□□□□□ -0.2
SCNM1-201ENST00000368902 CFDP1Q9UEE9 299 aaPredicted RBP13.83□□□□□ -0.2
SCNM1-201ENST00000368902 SPAG9O60271 1321 aaKnown RBP13.83□□□□□ -0.2
SCNM1-201ENST00000368902 CCNB3Q8WWL7 1395 aa13.82□□□□□ -0.2
SCNM1-201ENST00000368902 A2MP01023 1474 aa13.81□□□□□ -0.2
SCNM1-201ENST00000368902 APLP2Q06481 763 aa13.81□□□□□ -0.2
SCNM1-201ENST00000368902 KIAA1107Q9UPP5 1409 aa13.81□□□□□ -0.2
SCNM1-201ENST00000368902 ZMYM3Q14202 1370 aa13.8□□□□□ -0.2
SCNM1-201ENST00000368902 TCOF1Q13428 1488 aaKnown RBP13.8□□□□□ -0.2
SCNM1-201ENST00000368902 ADGBQ8N7X0 1667 aa13.79□□□□□ -0.2
SCNM1-201ENST00000368902 PTPRKQ15262 1439 aa13.79□□□□□ -0.2
SCNM1-201ENST00000368902 HNRNPMP52272 730 aaKnown RBP eCLIP13.78□□□□□ -0.2
SCNM1-201ENST00000368902 ZNF335Q9H4Z2 1342 aaPredicted RBP13.78□□□□□ -0.2
SCNM1-201ENST00000368902 TIAM1Q13009 1591 aa13.77□□□□□ -0.21
SCNM1-201ENST00000368902 KANK4Q5T7N3 995 aaPredicted RBP13.77□□□□□ -0.21
SCNM1-201ENST00000368902 EHBP1L1Q8N3D4 1523 aa13.76□□□□□ -0.21
SCNM1-201ENST00000368902 NCKAP5LQ9HCH0 1330 aa13.75□□□□□ -0.21
SCNM1-201ENST00000368902 PPP6R1Q9UPN7 881 aa13.75□□□□□ -0.21
SCNM1-201ENST00000368902 PKD2Q13563 968 aa13.74□□□□□ -0.21
SCNM1-201ENST00000368902 A2ML1A8K2U0 1454 aa13.74□□□□□ -0.21
SCNM1-201ENST00000368902 ZNF644Q9H582 1327 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms