RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 NUP153P49790 1475 aaKnown RBP24.12■■□□□ 1.45
CHTOP-203ENST00000368690 ERCC6L2Q5T890 1561 aa24.12■■□□□ 1.45
CHTOP-203ENST00000368690 PTPN23Q9H3S7 1636 aa24.11■■□□□ 1.45
CHTOP-203ENST00000368690 KDM5BQ9UGL1 1544 aa24.1■■□□□ 1.45
CHTOP-203ENST00000368690 ERICH6Q7L0X2 663 aa24.1■■□□□ 1.45
CHTOP-203ENST00000368690 OSCARQ8IYS5 282 aa24.1■■□□□ 1.45
CHTOP-203ENST00000368690 HNRNPUQ00839 825 aaKnown RBP eCLIP24.09■■□□□ 1.45
CHTOP-203ENST00000368690 PPP4R2Q9NY27 417 aa24.08■■□□□ 1.44
CHTOP-203ENST00000368690 EHBP1L1Q8N3D4 1523 aa24.05■■□□□ 1.44
CHTOP-203ENST00000368690 MAGI3Q5TCQ9 1506 aa24.05■■□□□ 1.44
CHTOP-203ENST00000368690 NCOA2Q15596 1464 aa24.04■■□□□ 1.44
CHTOP-203ENST00000368690 ABCA8O94911 1581 aa24.03■■□□□ 1.44
CHTOP-203ENST00000368690 SUPT6HQ7KZ85 1726 aaKnown RBP24.01■■□□□ 1.43
CHTOP-203ENST00000368690 NAIPQ13075 1403 aa23.99■■□□□ 1.43
CHTOP-203ENST00000368690 PTPRKQ15262 1439 aa23.97■■□□□ 1.43
CHTOP-203ENST00000368690 CNTLNQ9NXG0 1405 aa23.95■■□□□ 1.42
CHTOP-203ENST00000368690 WASHC2AQ641Q2 1341 aa23.94■■□□□ 1.42
CHTOP-203ENST00000368690 ATP10BO94823 1461 aa23.92■■□□□ 1.42
CHTOP-203ENST00000368690 MYOM3Q5VTT5 1437 aa23.91■■□□□ 1.42
CHTOP-203ENST00000368690 IRX6P78412 446 aaPredicted RBP23.9■■□□□ 1.42
CHTOP-203ENST00000368690 PLEKHD1A6NEE1 506 aa23.89■■□□□ 1.42
CHTOP-203ENST00000368690 ZBED9Q6R2W3 1325 aa23.88■■□□□ 1.41
CHTOP-203ENST00000368690 HSPA5P11021 654 aaKnown RBP23.88■■□□□ 1.41
CHTOP-203ENST00000368690 GCC2Q8IWJ2 1684 aa23.87■■□□□ 1.41
CHTOP-203ENST00000368690 TROQ12816 1431 aaPredicted RBP23.87■■□□□ 1.41
CHTOP-203ENST00000368690 ABCC2Q92887 1545 aa23.87■■□□□ 1.41
CHTOP-203ENST00000368690 AKNAQ7Z591 1439 aa23.85■■□□□ 1.41
CHTOP-203ENST00000368690 ARHGEF11O15085 1522 aa23.85■■□□□ 1.41
CHTOP-203ENST00000368690 EIF4G2P78344 907 aaKnown RBP eCLIP23.85■■□□□ 1.41
CHTOP-203ENST00000368690 NCOA1Q15788 1441 aa23.83■■□□□ 1.41
CHTOP-203ENST00000368690 KIF14Q15058 1648 aa23.8■■□□□ 1.4
CHTOP-203ENST00000368690 PRKRIP1Q9H875 184 aaPredicted RBP23.8■■□□□ 1.4
CHTOP-203ENST00000368690 POLR1AO95602 1720 aaPredicted RBP23.8■■□□□ 1.4
CHTOP-203ENST00000368690 DEKP35659 375 aaKnown RBP23.79■■□□□ 1.4
CHTOP-203ENST00000368690 TCOF1Q13428 1488 aaKnown RBP23.79■■□□□ 1.4
CHTOP-203ENST00000368690 DENND4BO75064 1496 aaPredicted RBP23.78■■□□□ 1.4
CHTOP-203ENST00000368690 CCDC7Q96M83 1385 aa23.78■■□□□ 1.4
CHTOP-203ENST00000368690 NOP58Q9Y2X3 529 aaKnown RBP23.76■■□□□ 1.39
CHTOP-203ENST00000368690 UHRF1BP1LA0JNW5 1464 aa23.75■■□□□ 1.39
CHTOP-203ENST00000368690 ADCY10Q96PN6 1610 aa23.73■■□□□ 1.39
CHTOP-203ENST00000368690 CCDC184Q52MB2 194 aa23.73■■□□□ 1.39
CHTOP-203ENST00000368690 ZCCHC11Q5TAX3 1644 aaKnown RBP23.73■■□□□ 1.39
CHTOP-203ENST00000368690 B4GALNT3Q6L9W6 998 aa23.72■■□□□ 1.39
CHTOP-203ENST00000368690 SMG6Q86US8 1419 aaKnown RBP23.71■■□□□ 1.39
CHTOP-203ENST00000368690 MIA2Q96PC5 1412 aa23.71■■□□□ 1.39
CHTOP-203ENST00000368690 MRS2Q9HD23 443 aa23.71■■□□□ 1.39
CHTOP-203ENST00000368690 CFDP1Q9UEE9 299 aaPredicted RBP23.7■■□□□ 1.38
CHTOP-203ENST00000368690 ZNF777Q9ULD5 760 aaPredicted RBP23.69■■□□□ 1.38
CHTOP-203ENST00000368690 RNF123Q5XPI4 1314 aa23.67■■□□□ 1.38
CHTOP-203ENST00000368690 ITSN2Q9NZM3 1697 aa23.67■■□□□ 1.38
CHTOP-203ENST00000368690 GPATCH8Q9UKJ3 1502 aaKnown RBP23.66■■□□□ 1.38
CHTOP-203ENST00000368690 ZNF644Q9H582 1327 aaPredicted RBP23.66■■□□□ 1.38
CHTOP-203ENST00000368690 FAM9BQ8IZU0 186 aa23.65■■□□□ 1.38
CHTOP-203ENST00000368690 SPATA31E1Q6ZUB1 1445 aa23.64■■□□□ 1.37
CHTOP-203ENST00000368690 ABCC10Q5T3U5 1492 aa23.63■■□□□ 1.37
CHTOP-203ENST00000368690 C11orf95C9JLR9 678 aaPredicted RBP23.62■■□□□ 1.37
CHTOP-203ENST00000368690 CHIC2Q9UKJ5 165 aa23.62■■□□□ 1.37
CHTOP-203ENST00000368690 RPRD2Q5VT52 1461 aaKnown RBP23.61■■□□□ 1.37
CHTOP-203ENST00000368690 L3MBTL2Q969R5 705 aa23.61■■□□□ 1.37
CHTOP-203ENST00000368690 NPM1P06748 294 aaKnown RBP eCLIP23.61■■□□□ 1.37
CHTOP-203ENST00000368690 MPHOSPH9Q99550 1183 aa23.61■■□□□ 1.37
CHTOP-203ENST00000368690 CDC42BPAQ5VT25 1732 aa23.61■■□□□ 1.37
CHTOP-203ENST00000368690 KDM6BO15054 1643 aa23.6■■□□□ 1.37
CHTOP-203ENST00000368690 TEX14Q8IWB6 1497 aa23.59■■□□□ 1.37
CHTOP-203ENST00000368690 CAMSAP2Q08AD1 1489 aa23.58■■□□□ 1.37
CHTOP-203ENST00000368690 IPO9Q96P70 1041 aaKnown RBP23.58■■□□□ 1.36
CHTOP-203ENST00000368690 RRP7BPQ9NSQ0 103 aa23.58■■□□□ 1.36
CHTOP-203ENST00000368690 TTC37Q6PGP7 1564 aa23.57■■□□□ 1.36
CHTOP-203ENST00000368690 ANP32AP39687 249 aaKnown RBP23.57■■□□□ 1.36
CHTOP-203ENST00000368690 CYB5RLQ6IPT4 315 aa23.57■■□□□ 1.36
CHTOP-203ENST00000368690 NUDCQ9Y266 331 aa23.57■■□□□ 1.36
CHTOP-203ENST00000368690 KIF7Q2M1P5 1343 aa23.56■■□□□ 1.36
CHTOP-203ENST00000368690 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.56■■□□□ 1.36
CHTOP-203ENST00000368690 ANKRD30BQ9BXX2 1392 aa23.56■■□□□ 1.36
CHTOP-203ENST00000368690 PAK3O75914 559 aaPredicted RBP23.55■■□□□ 1.36
CHTOP-203ENST00000368690 RIMBP3CA6NJZ7 1639 aa23.53■■□□□ 1.36
CHTOP-203ENST00000368690 RIMBP3BA6NNM3 1639 aa23.53■■□□□ 1.36
CHTOP-203ENST00000368690 RIMBP3Q9UFD9 1639 aa23.53■■□□□ 1.36
CHTOP-203ENST00000368690 WDR7Q9Y4E6 1490 aa23.53■■□□□ 1.36
CHTOP-203ENST00000368690 ROCK1Q13464 1354 aa23.53■■□□□ 1.36
CHTOP-203ENST00000368690 DAPK1P53355 1430 aa23.52■■□□□ 1.36
CHTOP-203ENST00000368690 ASXL2Q76L83 1435 aa23.5■■□□□ 1.35
CHTOP-203ENST00000368690 ARHGAP5Q13017 1502 aa23.5■■□□□ 1.35
CHTOP-203ENST00000368690 PREX2Q70Z35 1606 aa23.5■■□□□ 1.35
CHTOP-203ENST00000368690 CCDC136Q96JN2 1154 aa23.5■■□□□ 1.35
CHTOP-203ENST00000368690 DNMT1P26358 1616 aaKnown RBP23.49■■□□□ 1.35
CHTOP-203ENST00000368690 CDC42BPBQ9Y5S2 1711 aa23.49■■□□□ 1.35
CHTOP-203ENST00000368690 NBPF8Q3BBV2 869 aa23.49■■□□□ 1.35
CHTOP-203ENST00000368690 DHX29Q7Z478 1369 aaKnown RBP23.49■■□□□ 1.35
CHTOP-203ENST00000368690 ABCC5O15440 1437 aa23.48■■□□□ 1.35
CHTOP-203ENST00000368690 MYO5CQ9NQX4 1742 aa23.48■■□□□ 1.35
CHTOP-203ENST00000368690 NBR1Q14596 966 aa23.48■■□□□ 1.35
CHTOP-203ENST00000368690 ARID4BQ4LE39 1312 aaPredicted RBP23.47■■□□□ 1.35
CHTOP-203ENST00000368690 ZBTB47Q9UFB7 747 aaPredicted RBP23.46■■□□□ 1.35
CHTOP-203ENST00000368690 RTL5Q5HYW3 569 aaPredicted RBP23.45■■□□□ 1.35
CHTOP-203ENST00000368690 HNRNPMP52272 730 aaKnown RBP eCLIP23.44■■□□□ 1.349e-8■■■■■ 28.7
CHTOP-203ENST00000368690 SAMD9LQ8IVG5 1584 aa23.42■■□□□ 1.34
CHTOP-203ENST00000368690 MBD5Q9P267 1494 aa23.4■■□□□ 1.34
CHTOP-203ENST00000368690 PLCH2O75038 1416 aa23.4■■□□□ 1.34
CHTOP-203ENST00000368690 TSPY4P0CV99 314 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms