RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 FGD5Q6ZNL6 1462 aa23.83■■□□□ 1.41
CHTOP-201ENST00000368686 ATP1B4Q9UN42 357 aaPredicted RBP23.83■■□□□ 1.41
CHTOP-201ENST00000368686 EFCAB5A4FU69 1503 aa23.8■■□□□ 1.4
CHTOP-201ENST00000368686 RRP1P56182 461 aaKnown RBP23.8■■□□□ 1.4
CHTOP-201ENST00000368686 DENND4BO75064 1496 aaPredicted RBP23.78■■□□□ 1.4
CHTOP-201ENST00000368686 GCC2Q8IWJ2 1684 aa23.78■■□□□ 1.4
CHTOP-201ENST00000368686 SPATA31E1Q6ZUB1 1445 aa23.78■■□□□ 1.4
CHTOP-201ENST00000368686 DHX29Q7Z478 1369 aaKnown RBP23.77■■□□□ 1.39
CHTOP-201ENST00000368686 EXOC6Q8TAG9 804 aa23.76■■□□□ 1.39
CHTOP-201ENST00000368686 GLIPR1L2Q4G1C9 344 aa23.76■■□□□ 1.39
CHTOP-201ENST00000368686 L3MBTL2Q969R5 705 aa23.76■■□□□ 1.39
CHTOP-201ENST00000368686 FHOD3Q2V2M9 1422 aa23.75■■□□□ 1.39
CHTOP-201ENST00000368686 MYOM3Q5VTT5 1437 aa23.73■■□□□ 1.39
CHTOP-201ENST00000368686 PRDM2Q13029 1718 aa23.72■■□□□ 1.39
CHTOP-201ENST00000368686 P3H3Q8IVL6 736 aa23.72■■□□□ 1.39
CHTOP-201ENST00000368686 MTUS2Q5JR59 1369 aa23.71■■□□□ 1.39
CHTOP-201ENST00000368686 PNISRQ8TF01 805 aaKnown RBP23.7■■□□□ 1.38
CHTOP-201ENST00000368686 DAXXQ9UER7 740 aaPredicted RBP23.7■■□□□ 1.38
CHTOP-201ENST00000368686 MIA2Q96PC5 1412 aa23.68■■□□□ 1.38
CHTOP-201ENST00000368686 RCAN3Q9UKA8 241 aa23.66■■□□□ 1.38
CHTOP-201ENST00000368686 TEX14Q8IWB6 1497 aa23.65■■□□□ 1.38
CHTOP-201ENST00000368686 SUPT6HQ7KZ85 1726 aaKnown RBP23.64■■□□□ 1.38
CHTOP-201ENST00000368686 LRPPRCP42704 1394 aaKnown RBP23.64■■□□□ 1.37
CHTOP-201ENST00000368686 NBPF8Q3BBV2 869 aa23.64■■□□□ 1.37
CHTOP-201ENST00000368686 RPRD2Q5VT52 1461 aaKnown RBP23.64■■□□□ 1.37
CHTOP-201ENST00000368686 SNAPC4Q5SXM2 1469 aa23.63■■□□□ 1.37
CHTOP-201ENST00000368686 TMC1Q8TDI8 760 aa23.62■■□□□ 1.37
CHTOP-201ENST00000368686 MPHOSPH9Q99550 1183 aa23.62■■□□□ 1.37
CHTOP-201ENST00000368686 DCAF11Q8TEB1 546 aa23.59■■□□□ 1.37
CHTOP-201ENST00000368686 ARID4BQ4LE39 1312 aaPredicted RBP23.59■■□□□ 1.37
CHTOP-201ENST00000368686 RRP7BPQ9NSQ0 103 aa23.58■■□□□ 1.36
CHTOP-201ENST00000368686 EHBP1L1Q8N3D4 1523 aa23.57■■□□□ 1.36
CHTOP-201ENST00000368686 PDE3BQ13370 1112 aa23.57■■□□□ 1.36
CHTOP-201ENST00000368686 KDM6BO15054 1643 aa23.56■■□□□ 1.36
CHTOP-201ENST00000368686 SLC4A3P48751 1232 aa23.56■■□□□ 1.36
CHTOP-201ENST00000368686 TCOF1Q13428 1488 aaKnown RBP23.55■■□□□ 1.36
CHTOP-201ENST00000368686 FRAT2O75474 233 aaPredicted RBP23.54■■□□□ 1.36
CHTOP-201ENST00000368686 BRD4O60885 1362 aaPredicted RBP23.54■■□□□ 1.36
CHTOP-201ENST00000368686 ANKRD30BQ9BXX2 1392 aa23.54■■□□□ 1.36
CHTOP-201ENST00000368686 ROCK2O75116 1388 aaKnown RBP23.54■■□□□ 1.36
CHTOP-201ENST00000368686 CTTNBP2Q8WZ74 1663 aa23.53■■□□□ 1.36
CHTOP-201ENST00000368686 UGGT2Q9NYU1 1516 aa23.53■■□□□ 1.36
CHTOP-201ENST00000368686 BCORL1Q5H9F3 1711 aa23.53■■□□□ 1.36
CHTOP-201ENST00000368686 THOC2Q8NI27 1593 aaKnown RBP23.53■■□□□ 1.36
CHTOP-201ENST00000368686 LRRIQ1Q96JM4 1722 aa23.52■■□□□ 1.36
CHTOP-201ENST00000368686 KTN1Q86UP2 1357 aaKnown RBP23.52■■□□□ 1.36
CHTOP-201ENST00000368686 SENP3-EIF4A1A0A087X0R7 540 aa23.52■■□□□ 1.36
CHTOP-201ENST00000368686 ARHGEF11O15085 1522 aa23.51■■□□□ 1.35
CHTOP-201ENST00000368686 CNGB1Q14028 1251 aaPredicted RBP23.5■■□□□ 1.35
CHTOP-201ENST00000368686 KIF15Q9NS87 1388 aa23.49■■□□□ 1.35
CHTOP-201ENST00000368686 ZMYND15Q9H091 742 aa23.47■■□□□ 1.35
CHTOP-201ENST00000368686 FAM161AQ3B820 660 aa23.46■■□□□ 1.35
CHTOP-201ENST00000368686 RRAGDQ9NQL2 400 aaPredicted RBP23.46■■□□□ 1.35
CHTOP-201ENST00000368686 CHIC2Q9UKJ5 165 aa23.46■■□□□ 1.35
CHTOP-201ENST00000368686 MYBBP1AQ9BQG0 1328 aaKnown RBP23.46■■□□□ 1.35
CHTOP-201ENST00000368686 USP47Q96K76 1375 aa23.46■■□□□ 1.35
CHTOP-201ENST00000368686 L1TD1Q5T7N2 865 aaKnown RBP23.45■■□□□ 1.35
CHTOP-201ENST00000368686 FOXD1Q16676 465 aa23.45■■□□□ 1.34
CHTOP-201ENST00000368686 VSIG10Q8N0Z9 540 aa23.45■■□□□ 1.34
CHTOP-201ENST00000368686 CC2D2AQ9P2K1 1620 aa23.44■■□□□ 1.34
CHTOP-201ENST00000368686 GRIN2BQ13224 1484 aa23.44■■□□□ 1.34
CHTOP-201ENST00000368686 RALBP1Q15311 655 aa23.43■■□□□ 1.34
CHTOP-201ENST00000368686 POLR3GLQ9BT43 218 aa23.43■■□□□ 1.34
CHTOP-201ENST00000368686 CUL7Q14999 1698 aa23.42■■□□□ 1.34
CHTOP-201ENST00000368686 KDM5CP41229 1560 aa23.42■■□□□ 1.34
CHTOP-201ENST00000368686 CRBNQ96SW2 442 aa23.42■■□□□ 1.34
CHTOP-201ENST00000368686 KDM2BQ8NHM5 1336 aa23.41■■□□□ 1.34
CHTOP-201ENST00000368686 RRP9O43818 475 aaKnown RBP23.41■■□□□ 1.34
CHTOP-201ENST00000368686 MBD5Q9P267 1494 aa23.41■■□□□ 1.34
CHTOP-201ENST00000368686 SKAP1Q86WV1 359 aa23.4■■□□□ 1.34
CHTOP-201ENST00000368686 C8orf34Q49A92 452 aa23.4■■□□□ 1.34
CHTOP-201ENST00000368686 KIF14Q15058 1648 aa23.4■■□□□ 1.34
CHTOP-201ENST00000368686 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
CHTOP-201ENST00000368686 CENPQQ7L2Z9 268 aaPredicted RBP23.39■■□□□ 1.34
CHTOP-201ENST00000368686 HSP90AA2PQ14568 343 aaPredicted RBP23.37■■□□□ 1.33
CHTOP-201ENST00000368686 SAMD9Q5K651 1589 aa23.37■■□□□ 1.33
CHTOP-201ENST00000368686 ABCA10Q8WWZ4 1543 aa23.35■■□□□ 1.33
CHTOP-201ENST00000368686 PLIN1O60240 522 aa23.34■■□□□ 1.33
CHTOP-201ENST00000368686 HSP90AA1P07900 732 aaKnown RBP23.34■■□□□ 1.33
CHTOP-201ENST00000368686 POGKQ9P215 609 aa23.34■■□□□ 1.33
CHTOP-201ENST00000368686 NAP1L5Q96NT1 182 aaPredicted RBP23.33■■□□□ 1.32
CHTOP-201ENST00000368686 PNNQ9H307 717 aaKnown RBP23.32■■□□□ 1.32
CHTOP-201ENST00000368686 INSRP06213 1382 aa23.31■■□□□ 1.32
CHTOP-201ENST00000368686 ROCK1Q13464 1354 aa23.31■■□□□ 1.32
CHTOP-201ENST00000368686 E9PCH4 1651 aa23.31■■□□□ 1.32
CHTOP-201ENST00000368686 MAGI3Q5TCQ9 1506 aa23.3■■□□□ 1.32
CHTOP-201ENST00000368686 ZMYM4Q5VZL5 1548 aa23.3■■□□□ 1.32
CHTOP-201ENST00000368686 KIF21AQ7Z4S6 1674 aa23.3■■□□□ 1.32
CHTOP-201ENST00000368686 CLCN1P35523 988 aa23.3■■□□□ 1.32
CHTOP-201ENST00000368686 NLRP13Q86W25 1043 aa23.29■■□□□ 1.32
CHTOP-201ENST00000368686 CDCA7LQ96GN5 454 aa23.29■■□□□ 1.32
CHTOP-201ENST00000368686 PLEKHH2Q8IVE3 1493 aa23.28■■□□□ 1.32
CHTOP-201ENST00000368686 VIRMAQ69YN4 1812 aaKnown RBP23.28■■□□□ 1.32
CHTOP-201ENST00000368686 SLC4A1APQ9BWU0 796 aaKnown RBP23.27■■□□□ 1.32
CHTOP-201ENST00000368686 DNMBPQ6XZF7 1577 aa23.24■■□□□ 1.31
CHTOP-201ENST00000368686 RALGAPBQ86X10 1494 aa23.23■■□□□ 1.31
CHTOP-201ENST00000368686 BLMP54132 1417 aaPredicted RBP23.23■■□□□ 1.31
CHTOP-201ENST00000368686 PARD3Q8TEW0 1356 aa23.22■■□□□ 1.31
CHTOP-201ENST00000368686 BECN1Q14457 450 aa23.21■■□□□ 1.31
CHTOP-201ENST00000368686 UHRF1BP1Q6BDS2 1440 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms