RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 MAGI2Q86UL8 1455 aa18.4■□□□□ 0.54
TUBE1-201ENST00000368657 MED1Q15648 1581 aaPredicted RBP18.4■□□□□ 0.54
TUBE1-201ENST00000368657 EFCAB5A4FU69 1503 aa18.39■□□□□ 0.54
TUBE1-201ENST00000368657 RICTORQ6R327 1708 aa18.39■□□□□ 0.53
TUBE1-201ENST00000368657 ARID3CA6NKF2 412 aa18.38■□□□□ 0.53
TUBE1-201ENST00000368657 ZFYVE16Q7Z3T8 1539 aa18.38■□□□□ 0.53
TUBE1-201ENST00000368657 SUPT5HO00267 1087 aaKnown RBP18.37■□□□□ 0.53
TUBE1-201ENST00000368657 ARHGEF12Q9NZN5 1544 aa18.37■□□□□ 0.53
TUBE1-201ENST00000368657 SIGLEC1Q9BZZ2 1709 aa18.35■□□□□ 0.53
TUBE1-201ENST00000368657 ZMYM4Q5VZL5 1548 aa18.35■□□□□ 0.53
TUBE1-201ENST00000368657 HSPA1LP34931 641 aa18.35■□□□□ 0.53
TUBE1-201ENST00000368657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.31■□□□□ 0.52
TUBE1-201ENST00000368657 HNRNPUL2Q1KMD3 747 aaKnown RBP18.31■□□□□ 0.52
TUBE1-201ENST00000368657 ATP10AO60312 1499 aa18.3■□□□□ 0.52
TUBE1-201ENST00000368657 NCOA1Q15788 1441 aa18.29■□□□□ 0.52
TUBE1-201ENST00000368657 ZNF335Q9H4Z2 1342 aaPredicted RBP18.27■□□□□ 0.52
TUBE1-201ENST00000368657 CFAP74Q9C0B2 1584 aa18.26■□□□□ 0.51
TUBE1-201ENST00000368657 TOM1O60784 492 aa18.26■□□□□ 0.51
TUBE1-201ENST00000368657 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
TUBE1-201ENST00000368657 C9orf84Q5VXU9 1444 aa18.24■□□□□ 0.51
TUBE1-201ENST00000368657 TRAPPC8Q9Y2L5 1435 aa18.24■□□□□ 0.51
TUBE1-201ENST00000368657 HECW1Q76N89 1606 aa18.23■□□□□ 0.51
TUBE1-201ENST00000368657 PIP4K2BP78356 416 aa18.23■□□□□ 0.51
TUBE1-201ENST00000368657 PLEKHD1A6NEE1 506 aa18.22■□□□□ 0.51
TUBE1-201ENST00000368657 CTTNBP2Q8WZ74 1663 aa18.21■□□□□ 0.51
TUBE1-201ENST00000368657 ESF1Q9H501 851 aaKnown RBP18.2■□□□□ 0.5
TUBE1-201ENST00000368657 PKD2Q13563 968 aa18.18■□□□□ 0.5
TUBE1-201ENST00000368657 NCKAP5LQ9HCH0 1330 aa18.18■□□□□ 0.5
TUBE1-201ENST00000368657 SCAPERQ9BY12 1400 aa18.17■□□□□ 0.5
TUBE1-201ENST00000368657 P3H3Q8IVL6 736 aa18.17■□□□□ 0.5
TUBE1-201ENST00000368657 CAMSAP1Q5T5Y3 1602 aa18.15■□□□□ 0.5
TUBE1-201ENST00000368657 C3P01024 1663 aa18.13■□□□□ 0.49
TUBE1-201ENST00000368657 RAPGEF6Q8TEU7 1601 aa18.1■□□□□ 0.49
TUBE1-201ENST00000368657 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.1■□□□□ 0.49
TUBE1-201ENST00000368657 RGS17Q9UGC6 210 aaPredicted RBP18.09■□□□□ 0.49
TUBE1-201ENST00000368657 PLCH2O75038 1416 aa18.06■□□□□ 0.48
TUBE1-201ENST00000368657 NPATQ14207 1427 aa18.06■□□□□ 0.48
TUBE1-201ENST00000368657 CNTLNQ9NXG0 1405 aa18.06■□□□□ 0.48
TUBE1-201ENST00000368657 EFCAB2Q5VUJ9 269 aa18.05■□□□□ 0.48
TUBE1-201ENST00000368657 PLA2R1Q13018 1463 aa18.05■□□□□ 0.48
TUBE1-201ENST00000368657 NUP153P49790 1475 aaKnown RBP18.04■□□□□ 0.48
TUBE1-201ENST00000368657 MYT1LQ9UL68 1186 aa18.04■□□□□ 0.48
TUBE1-201ENST00000368657 PTPRKQ15262 1439 aa18.04■□□□□ 0.48
TUBE1-201ENST00000368657 MAPK8IP2Q13387 824 aaPredicted RBP18.03■□□□□ 0.48
TUBE1-201ENST00000368657 AGLP35573 1532 aa18.03■□□□□ 0.48
TUBE1-201ENST00000368657 CPS1P31327 1500 aa18.01■□□□□ 0.47
TUBE1-201ENST00000368657 TCOF1Q13428 1488 aaKnown RBP18.01■□□□□ 0.47
TUBE1-201ENST00000368657 REREQ9P2R6 1566 aa18■□□□□ 0.47
TUBE1-201ENST00000368657 ZNF518AQ6AHZ1 1483 aa18■□□□□ 0.47
TUBE1-201ENST00000368657 AFAP1Q8N556 730 aa17.99■□□□□ 0.47
TUBE1-201ENST00000368657 ZMYM3Q14202 1370 aa17.95■□□□□ 0.46
TUBE1-201ENST00000368657 POTEAQ6S8J7 498 aa17.94■□□□□ 0.46
TUBE1-201ENST00000368657 SHANK2Q9UPX8 1470 aa17.94■□□□□ 0.46
TUBE1-201ENST00000368657 DIP2CQ9Y2E4 1556 aa17.92■□□□□ 0.46
TUBE1-201ENST00000368657 KDM5CP41229 1560 aa17.91■□□□□ 0.46
TUBE1-201ENST00000368657 PRXQ9BXM0 1461 aa17.91■□□□□ 0.46
TUBE1-201ENST00000368657 PPP4R3CPQ6ZMV5 832 aa17.91■□□□□ 0.46
TUBE1-201ENST00000368657 SAMD9Q5K651 1589 aa17.91■□□□□ 0.46
TUBE1-201ENST00000368657 MLH3Q9UHC1 1453 aa17.9■□□□□ 0.46
TUBE1-201ENST00000368657 SUPT6HQ7KZ85 1726 aaKnown RBP17.89■□□□□ 0.45
TUBE1-201ENST00000368657 MROH2AA6NES4 1674 aa17.88■□□□□ 0.45
TUBE1-201ENST00000368657 ZNF142P52746 1687 aaPredicted RBP17.87■□□□□ 0.45
TUBE1-201ENST00000368657 CEP170BQ9Y4F5 1589 aaPredicted RBP17.86■□□□□ 0.45
TUBE1-201ENST00000368657 ALKQ9UM73 1620 aa17.86■□□□□ 0.45
TUBE1-201ENST00000368657 ABCA6Q8N139 1617 aa17.83■□□□□ 0.44
TUBE1-201ENST00000368657 UPF1Q92900 1129 aaKnown RBP eCLIP17.82■□□□□ 0.44
TUBE1-201ENST00000368657 MYO3AQ8NEV4 1616 aa17.82■□□□□ 0.44
TUBE1-201ENST00000368657 MYO5CQ9NQX4 1742 aa17.81■□□□□ 0.44
TUBE1-201ENST00000368657 ANKLE2Q86XL3 938 aa17.78■□□□□ 0.44
TUBE1-201ENST00000368657 CDK11AQ9UQ88 783 aaPredicted RBP17.78■□□□□ 0.44
TUBE1-201ENST00000368657 A2ML1A8K2U0 1454 aa17.77■□□□□ 0.44
TUBE1-201ENST00000368657 ARHGAP5Q13017 1502 aa17.76■□□□□ 0.43
TUBE1-201ENST00000368657 VWDEQ8N2E2 1590 aa17.74■□□□□ 0.43
TUBE1-201ENST00000368657 DNMT1P26358 1616 aaKnown RBP17.74■□□□□ 0.43
TUBE1-201ENST00000368657 POLR1AO95602 1720 aaPredicted RBP17.72■□□□□ 0.43
TUBE1-201ENST00000368657 NEURL4Q96JN8 1562 aa17.71■□□□□ 0.43
TUBE1-201ENST00000368657 RANGAP1P46060 587 aaPredicted RBP17.71■□□□□ 0.43
TUBE1-201ENST00000368657 THEMISQ8N1K5 641 aaPredicted RBP17.7■□□□□ 0.42
TUBE1-201ENST00000368657 CDK13Q14004 1512 aaKnown RBP17.7■□□□□ 0.42
TUBE1-201ENST00000368657 LRRC7Q96NW7 1537 aa17.7■□□□□ 0.42
TUBE1-201ENST00000368657 SETD1AO15047 1707 aaKnown RBP17.69■□□□□ 0.42
TUBE1-201ENST00000368657 CLTCQ00610 1675 aaKnown RBP17.69■□□□□ 0.42
TUBE1-201ENST00000368657 KIDINS220Q9ULH0 1771 aa17.68■□□□□ 0.42
TUBE1-201ENST00000368657 SRCAPQ6ZRS2 3230 aa17.68■□□□□ 0.42
TUBE1-201ENST00000368657 RNF17Q9BXT8 1623 aaKnown RBP17.68■□□□□ 0.42
TUBE1-201ENST00000368657 MED14O60244 1454 aa17.67■□□□□ 0.42
TUBE1-201ENST00000368657 NPHP4O75161 1426 aaPredicted RBP17.66■□□□□ 0.42
TUBE1-201ENST00000368657 GGT6Q6P531 493 aa17.66■□□□□ 0.42
TUBE1-201ENST00000368657 FAM135BQ49AJ0 1406 aa17.65■□□□□ 0.42
TUBE1-201ENST00000368657 ATP1B4Q9UN42 357 aaPredicted RBP17.63■□□□□ 0.41
TUBE1-201ENST00000368657 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.63■□□□□ 0.41
TUBE1-201ENST00000368657 KIF14Q15058 1648 aa17.62■□□□□ 0.41
TUBE1-201ENST00000368657 CLIP1P30622 1438 aa17.6■□□□□ 0.41
TUBE1-201ENST00000368657 TROQ12816 1431 aaPredicted RBP17.6■□□□□ 0.41
TUBE1-201ENST00000368657 ABCC1P33527 1531 aa17.6■□□□□ 0.41
TUBE1-201ENST00000368657 SYNMO15061 1565 aa17.6■□□□□ 0.41
TUBE1-201ENST00000368657 DEPDC5O75140 1603 aa17.6■□□□□ 0.41
TUBE1-201ENST00000368657 CDC42BPBQ9Y5S2 1711 aa17.59■□□□□ 0.41
TUBE1-201ENST00000368657 TNRQ92752 1358 aa17.59■□□□□ 0.41
TUBE1-201ENST00000368657 SPAG9O60271 1321 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms