RNA–Protein interactions for RNA: ENST00000368498.6

GOPC-202, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,450 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-202ENST00000368498 MAPK8IP3Q9UPT6 1336 aa17.13■□□□□ 0.33
GOPC-202ENST00000368498 APBB1O00213 710 aa17.13■□□□□ 0.33
GOPC-202ENST00000368498 ZRSR1Q15695 479 aaKnown RBP17.11■□□□□ 0.33
GOPC-202ENST00000368498 PAK3O75914 559 aaPredicted RBP17.11■□□□□ 0.33
GOPC-202ENST00000368498 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
GOPC-202ENST00000368498 RSPH6AQ9H0K4 717 aa17.11■□□□□ 0.33
GOPC-202ENST00000368498 PLEKHD1A6NEE1 506 aa17.1■□□□□ 0.33
GOPC-202ENST00000368498 RB1CC1Q8TDY2 1594 aa17.09■□□□□ 0.33
GOPC-202ENST00000368498 PRKRIP1Q9H875 184 aaPredicted RBP17.09■□□□□ 0.33
GOPC-202ENST00000368498 TMF1P82094 1093 aa17.08■□□□□ 0.33
GOPC-202ENST00000368498 GBP4Q96PP9 640 aa17.08■□□□□ 0.32
GOPC-202ENST00000368498 CHAF1AQ13111 956 aaPredicted RBP17.08■□□□□ 0.32
GOPC-202ENST00000368498 ABCC8Q09428 1581 aa17.07■□□□□ 0.32
GOPC-202ENST00000368498 BRPF3Q9ULD4 1205 aa17.07■□□□□ 0.32
GOPC-202ENST00000368498 MPHOSPH9Q99550 1183 aa17.06■□□□□ 0.32
GOPC-202ENST00000368498 PKD2Q13563 968 aa17.06■□□□□ 0.32
GOPC-202ENST00000368498 ESF1Q9H501 851 aaKnown RBP17.06■□□□□ 0.32
GOPC-202ENST00000368498 PRKCSHP14314 528 aaPredicted RBP17.04■□□□□ 0.32
GOPC-202ENST00000368498 KTN1Q86UP2 1357 aaKnown RBP17.04■□□□□ 0.32
GOPC-202ENST00000368498 CCDC146Q8IYE0 955 aa17.04■□□□□ 0.32
GOPC-202ENST00000368498 CHMP7Q8WUX9 453 aaPredicted RBP17.04■□□□□ 0.32
GOPC-202ENST00000368498 DRC7Q8IY82 874 aa17.02■□□□□ 0.31
GOPC-202ENST00000368498 GOLGA6L4A6NEF3 574 aa17.01■□□□□ 0.31
GOPC-202ENST00000368498 MS4A1P11836 297 aa17.01■□□□□ 0.31
GOPC-202ENST00000368498 CRBNQ96SW2 442 aa17.01■□□□□ 0.31
GOPC-202ENST00000368498 ZBED9Q6R2W3 1325 aa17■□□□□ 0.31
GOPC-202ENST00000368498 RWDD1Q9H446 243 aaPredicted RBP17■□□□□ 0.31
GOPC-202ENST00000368498 KIAA2012Q0VF49 1180 aa17■□□□□ 0.31
GOPC-202ENST00000368498 NFKBIBQ15653 356 aa17■□□□□ 0.31
GOPC-202ENST00000368498 ITPRIPQ8IWB1 547 aa17■□□□□ 0.31
GOPC-202ENST00000368498 RRP1P56182 461 aaKnown RBP16.99■□□□□ 0.31
GOPC-202ENST00000368498 GOLGA2Q08379 1002 aa16.99■□□□□ 0.31
GOPC-202ENST00000368498 RALBP1Q15311 655 aa16.99■□□□□ 0.31
GOPC-202ENST00000368498 KCNJ4P48050 445 aa16.99■□□□□ 0.31
GOPC-202ENST00000368498 FAM161AQ3B820 660 aa16.99■□□□□ 0.31
GOPC-202ENST00000368498 C14orf37Q86TY3 774 aa16.98■□□□□ 0.31
GOPC-202ENST00000368498 NLRP13Q86W25 1043 aa16.98■□□□□ 0.31
GOPC-202ENST00000368498 MORC1Q86VD1 984 aa16.98■□□□□ 0.31
GOPC-202ENST00000368498 SAFB2Q14151 953 aaKnown RBP eCLIP16.97■□□□□ 0.31
GOPC-202ENST00000368498 FOXD4L5Q5VV16 416 aaPredicted RBP16.97■□□□□ 0.31
GOPC-202ENST00000368498 FOXD4L4Q8WXT5 416 aaPredicted RBP16.97■□□□□ 0.31
GOPC-202ENST00000368498 CALD1Q05682 793 aaKnown RBP16.97■□□□□ 0.31
GOPC-202ENST00000368498 BCL2L13Q9BXK5 485 aa16.97■□□□□ 0.31
GOPC-202ENST00000368498 FGD1P98174 961 aa16.96■□□□□ 0.31
GOPC-202ENST00000368498 NAP1L2Q9ULW6 460 aaPredicted RBP16.96■□□□□ 0.31
GOPC-202ENST00000368498 MSH5O43196 834 aa16.96■□□□□ 0.3
GOPC-202ENST00000368498 U2AF1L5P0DN76 240 aaPredicted RBP16.94■□□□□ 0.3
GOPC-202ENST00000368498 U2AF1Q01081 240 aaKnown RBP eCLIP16.94■□□□□ 0.37e-7■■■■□ 25
GOPC-202ENST00000368498 NOL8Q76FK4 1167 aaKnown RBP16.94■□□□□ 0.3
GOPC-202ENST00000368498 FHAD1B1AJZ9 1412 aa16.93■□□□□ 0.3
GOPC-202ENST00000368498 FAM13BQ9NYF5 915 aa16.93■□□□□ 0.3
GOPC-202ENST00000368498 CARMIL1Q5VZK9 1371 aa16.92■□□□□ 0.3
GOPC-202ENST00000368498 PDE3BQ13370 1112 aa16.92■□□□□ 0.3
GOPC-202ENST00000368498 ST20-MTHFSA0A0A6YYL1 179 aa16.91■□□□□ 0.3
GOPC-202ENST00000368498 OS9Q13438 667 aaPredicted RBP16.91■□□□□ 0.3
GOPC-202ENST00000368498 FOXD4L6Q3SYB3 417 aaPredicted RBP16.91■□□□□ 0.3
GOPC-202ENST00000368498 FOXD4L3Q6VB84 417 aaPredicted RBP16.91■□□□□ 0.3
GOPC-202ENST00000368498 DDX49Q9Y6V7 483 aaKnown RBP16.91■□□□□ 0.3
GOPC-202ENST00000368498 SOX12O15370 315 aa16.9■□□□□ 0.3
GOPC-202ENST00000368498 CENPQQ7L2Z9 268 aaPredicted RBP16.9■□□□□ 0.3
GOPC-202ENST00000368498 CHMP4BQ9H444 224 aaKnown RBP16.9■□□□□ 0.3
GOPC-202ENST00000368498 COG6Q9Y2V7 657 aa16.9■□□□□ 0.3
GOPC-202ENST00000368498 RRP7AQ9Y3A4 280 aaKnown RBP16.9■□□□□ 0.3
GOPC-202ENST00000368498 ARHGAP35Q9NRY4 1499 aa16.9■□□□□ 0.3
GOPC-202ENST00000368498 PMFBP1Q8TBY8 1022 aa16.9■□□□□ 0.3
GOPC-202ENST00000368498 NPM1P06748 294 aaKnown RBP eCLIP16.88■□□□□ 0.29
GOPC-202ENST00000368498 SMC4Q9NTJ3 1288 aa16.88■□□□□ 0.29
GOPC-202ENST00000368498 RUSC2Q8N2Y8 1516 aa16.88■□□□□ 0.29
GOPC-202ENST00000368498 FRAT2O75474 233 aaPredicted RBP16.88■□□□□ 0.29
GOPC-202ENST00000368498 ROCK2O75116 1388 aaKnown RBP16.88■□□□□ 0.29
GOPC-202ENST00000368498 POGKQ9P215 609 aa16.88■□□□□ 0.29
GOPC-202ENST00000368498 NRDCO43847 1150 aa16.87■□□□□ 0.29
GOPC-202ENST00000368498 CENPJQ9HC77 1338 aaPredicted RBP16.87■□□□□ 0.29
GOPC-202ENST00000368498 A0A0G2JS52 829 aa16.86■□□□□ 0.29
GOPC-202ENST00000368498 IPO8O15397 1037 aaKnown RBP16.85■□□□□ 0.29
GOPC-202ENST00000368498 GOLGA6L6A8MZA4 724 aa16.84■□□□□ 0.29
GOPC-202ENST00000368498 MCCP23508 829 aa16.84■□□□□ 0.29
GOPC-202ENST00000368498 TNNT3P45378 269 aaPredicted RBP16.83■□□□□ 0.29
GOPC-202ENST00000368498 CUX2O14529 1486 aa16.83■□□□□ 0.28
GOPC-202ENST00000368498 SRPK2P78362 688 aaKnown RBP16.82■□□□□ 0.28
GOPC-202ENST00000368498 MROH2BQ7Z745 1585 aa16.82■□□□□ 0.28
GOPC-202ENST00000368498 MYBBP1AQ9BQG0 1328 aaKnown RBP16.82■□□□□ 0.28
GOPC-202ENST00000368498 DDX11L8A8MPP1 907 aa16.82■□□□□ 0.28
GOPC-202ENST00000368498 FMN1Q68DA7 1419 aa16.82■□□□□ 0.28
GOPC-202ENST00000368498 NUP155O75694 1391 aa16.82■□□□□ 0.28
GOPC-202ENST00000368498 PTMSP20962 102 aa16.81■□□□□ 0.28
GOPC-202ENST00000368498 PANK3Q9H999 370 aa16.81■□□□□ 0.28
GOPC-202ENST00000368498 TULP1O00294 542 aaPredicted RBP16.8■□□□□ 0.28
GOPC-202ENST00000368498 FAM43AQ8N2R8 423 aa16.8■□□□□ 0.28
GOPC-202ENST00000368498 RAPGEF2Q9Y4G8 1499 aa16.8■□□□□ 0.28
GOPC-202ENST00000368498 PKNOX2Q96KN3 472 aa16.79■□□□□ 0.28
GOPC-202ENST00000368498 APAF1O14727 1248 aa16.79■□□□□ 0.28
GOPC-202ENST00000368498 A0A0U1RQG5 324 aaPredicted RBP16.78■□□□□ 0.28
GOPC-202ENST00000368498 SYAP1Q96A49 352 aaPredicted RBP16.78■□□□□ 0.28
GOPC-202ENST00000368498 ELL2O00472 640 aaPredicted RBP16.78■□□□□ 0.28
GOPC-202ENST00000368498 CDCA7LQ96GN5 454 aa16.78■□□□□ 0.28
GOPC-202ENST00000368498 CCDC184Q52MB2 194 aa16.77■□□□□ 0.28
GOPC-202ENST00000368498 STK26Q9P289 416 aa16.77■□□□□ 0.28
GOPC-202ENST00000368498 KIAA1211Q6ZU35 1233 aa16.76■□□□□ 0.27
GOPC-202ENST00000368498 WASHC2AQ641Q2 1341 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms