RNA–Protein interactions for RNA: ENST00000368396.8

MUC1-209, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-209ENST00000368396 ABCC2Q92887 1545 aa11.63□□□□□ -0.55
MUC1-209ENST00000368396 ABCC5O15440 1437 aa11.62□□□□□ -0.55
MUC1-209ENST00000368396 DAPK1P53355 1430 aa11.62□□□□□ -0.55
MUC1-209ENST00000368396 ROCK1Q13464 1354 aa11.62□□□□□ -0.55
MUC1-209ENST00000368396 UHRF1BP1LA0JNW5 1464 aa11.62□□□□□ -0.55
MUC1-209ENST00000368396 CAMSAP2Q08AD1 1489 aa11.61□□□□□ -0.55
MUC1-209ENST00000368396 CFDP1Q9UEE9 299 aaPredicted RBP11.6□□□□□ -0.55
MUC1-209ENST00000368396 CDC42BPAQ5VT25 1732 aa11.59□□□□□ -0.55
MUC1-209ENST00000368396 ZNF644Q9H582 1327 aaPredicted RBP11.59□□□□□ -0.55
MUC1-209ENST00000368396 ZNF316A6NFI3 1004 aaPredicted RBP11.58□□□□□ -0.56
MUC1-209ENST00000368396 ACIN1Q9UKV3 1341 aaKnown RBP11.58□□□□□ -0.56
MUC1-209ENST00000368396 RRP7BPQ9NSQ0 103 aa11.57□□□□□ -0.56
MUC1-209ENST00000368396 CHIC2Q9UKJ5 165 aa11.57□□□□□ -0.56
MUC1-209ENST00000368396 ADGRL2O95490 1459 aa11.56□□□□□ -0.56
MUC1-209ENST00000368396 CROCC2H7BZ55 1655 aa11.55□□□□□ -0.56
MUC1-209ENST00000368396 KDM5BQ9UGL1 1544 aa11.55□□□□□ -0.56
MUC1-209ENST00000368396 TIMELESSQ9UNS1 1208 aa11.55□□□□□ -0.56
MUC1-209ENST00000368396 ADGBQ8N7X0 1667 aa11.55□□□□□ -0.56
MUC1-209ENST00000368396 KDM6BO15054 1643 aa11.54□□□□□ -0.56
MUC1-209ENST00000368396 ZCCHC11Q5TAX3 1644 aaKnown RBP11.54□□□□□ -0.56
MUC1-209ENST00000368396 PREX2Q70Z35 1606 aa11.54□□□□□ -0.56
MUC1-209ENST00000368396 SHANK2Q9UPX8 1470 aa11.53□□□□□ -0.56
MUC1-209ENST00000368396 ARHGEF5Q12774 1597 aa11.53□□□□□ -0.56
MUC1-209ENST00000368396 NCOA1Q15788 1441 aa11.52□□□□□ -0.57
MUC1-209ENST00000368396 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.51□□□□□ -0.57
MUC1-209ENST00000368396 SIN3AQ96ST3 1273 aa11.51□□□□□ -0.57
MUC1-209ENST00000368396 ZNF777Q9ULD5 760 aaPredicted RBP11.51□□□□□ -0.57
MUC1-209ENST00000368396 CDC42BPBQ9Y5S2 1711 aa11.51□□□□□ -0.57
MUC1-209ENST00000368396 TTC37Q6PGP7 1564 aa11.5□□□□□ -0.57
MUC1-209ENST00000368396 DIEXFQ68CQ4 756 aaKnown RBP11.5□□□□□ -0.57
MUC1-209ENST00000368396 OSCARQ8IYS5 282 aa11.5□□□□□ -0.57
MUC1-209ENST00000368396 DENND4BO75064 1496 aaPredicted RBP11.5□□□□□ -0.57
MUC1-209ENST00000368396 MBD5Q9P267 1494 aa11.5□□□□□ -0.57
MUC1-209ENST00000368396 SAMD9LQ8IVG5 1584 aa11.5□□□□□ -0.57
MUC1-209ENST00000368396 ANKRD30AQ9BXX3 1397 aa11.49□□□□□ -0.57
MUC1-209ENST00000368396 MYO5CQ9NQX4 1742 aa11.47□□□□□ -0.57
MUC1-209ENST00000368396 PLEKHH2Q8IVE3 1493 aa11.47□□□□□ -0.57
MUC1-209ENST00000368396 C9orf84Q5VXU9 1444 aa11.47□□□□□ -0.57
MUC1-209ENST00000368396 NEUROD1Q13562 356 aa11.47□□□□□ -0.57
MUC1-209ENST00000368396 RSPH4AQ5TD94 716 aa11.47□□□□□ -0.57
MUC1-209ENST00000368396 TRIM52Q96A61 297 aa11.47□□□□□ -0.57
MUC1-209ENST00000368396 CCDC141Q6ZP82 1450 aa11.46□□□□□ -0.57
MUC1-209ENST00000368396 KIAA1107Q9UPP5 1409 aa11.46□□□□□ -0.57
MUC1-209ENST00000368396 MPHOSPH9Q99550 1183 aa11.46□□□□□ -0.57
MUC1-209ENST00000368396 ARHGAP5Q13017 1502 aa11.45□□□□□ -0.58
MUC1-209ENST00000368396 PLCH2O75038 1416 aa11.45□□□□□ -0.58
MUC1-209ENST00000368396 MAST1Q9Y2H9 1570 aa11.45□□□□□ -0.58
MUC1-209ENST00000368396 ARAP3Q8WWN8 1544 aa11.45□□□□□ -0.58
MUC1-209ENST00000368396 PPP1R15AO75807 674 aaPredicted RBP11.44□□□□□ -0.58
MUC1-209ENST00000368396 TSPY4P0CV99 314 aa11.44□□□□□ -0.58
MUC1-209ENST00000368396 TSPY10P0CW01 314 aa11.44□□□□□ -0.58
MUC1-209ENST00000368396 HNRNPMP52272 730 aaKnown RBP eCLIP11.44□□□□□ -0.58
MUC1-209ENST00000368396 ANKRD50Q9ULJ7 1429 aa11.43□□□□□ -0.58
MUC1-209ENST00000368396 KCNH8Q96L42 1107 aa11.43□□□□□ -0.58
MUC1-209ENST00000368396 SYCP2Q9BX26 1530 aa11.43□□□□□ -0.58
MUC1-209ENST00000368396 PZPP20742 1482 aa11.43□□□□□ -0.58
MUC1-209ENST00000368396 WDR7Q9Y4E6 1490 aa11.43□□□□□ -0.58
MUC1-209ENST00000368396 TONSLQ96HA7 1378 aa11.42□□□□□ -0.58
MUC1-209ENST00000368396 ANKRD30BQ9BXX2 1392 aa11.41□□□□□ -0.58
MUC1-209ENST00000368396 KIF15Q9NS87 1388 aa11.41□□□□□ -0.58
MUC1-209ENST00000368396 KDM5DQ9BY66 1539 aa11.4□□□□□ -0.58
MUC1-209ENST00000368396 EFCAB2Q5VUJ9 269 aa11.4□□□□□ -0.58
MUC1-209ENST00000368396 ABCC1P33527 1531 aa11.4□□□□□ -0.59
MUC1-209ENST00000368396 ARHGEF12Q9NZN5 1544 aa11.4□□□□□ -0.59
MUC1-209ENST00000368396 PLXNC1O60486 1568 aa11.39□□□□□ -0.59
MUC1-209ENST00000368396 ABCA9Q8IUA7 1624 aa11.38□□□□□ -0.59
MUC1-209ENST00000368396 SLC4A1APQ9BWU0 796 aaKnown RBP11.38□□□□□ -0.59
MUC1-209ENST00000368396 ASXL2Q76L83 1435 aa11.37□□□□□ -0.59
MUC1-209ENST00000368396 MSH5O43196 834 aa11.37□□□□□ -0.59
MUC1-209ENST00000368396 RPRD2Q5VT52 1461 aaKnown RBP11.37□□□□□ -0.59
MUC1-209ENST00000368396 NUP155O75694 1391 aa11.34□□□□□ -0.59
MUC1-209ENST00000368396 DUOX2Q9NRD8 1548 aa11.34□□□□□ -0.59
MUC1-209ENST00000368396 UNC13BO14795 1591 aa11.33□□□□□ -0.6
MUC1-209ENST00000368396 NPM1P06748 294 aaKnown RBP eCLIP11.33□□□□□ -0.6
MUC1-209ENST00000368396 RTEL1-TNFRSF6BF6WH68 1400 aa11.33□□□□□ -0.6
MUC1-209ENST00000368396 TRAPPC8Q9Y2L5 1435 aa11.33□□□□□ -0.6
MUC1-209ENST00000368396 TEX14Q8IWB6 1497 aa11.32□□□□□ -0.6
MUC1-209ENST00000368396 PKD2Q13563 968 aa11.32□□□□□ -0.6
MUC1-209ENST00000368396 FANCAO15360 1455 aa11.32□□□□□ -0.6
MUC1-209ENST00000368396 ERBINQ96RT1 1412 aa11.31□□□□□ -0.6
MUC1-209ENST00000368396 FAM135AQ9P2D6 1515 aa11.3□□□□□ -0.6
MUC1-209ENST00000368396 L3MBTL2Q969R5 705 aa11.3□□□□□ -0.6
MUC1-209ENST00000368396 MAGI2Q86UL8 1455 aa11.3□□□□□ -0.6
MUC1-209ENST00000368396 ZFYVE16Q7Z3T8 1539 aa11.3□□□□□ -0.6
MUC1-209ENST00000368396 MIER1Q8N108 512 aa11.29□□□□□ -0.6
MUC1-209ENST00000368396 SPAG9O60271 1321 aaKnown RBP11.29□□□□□ -0.6
MUC1-209ENST00000368396 IQGAP3Q86VI3 1631 aa11.28□□□□□ -0.6
MUC1-209ENST00000368396 ADGRL1O94910 1474 aa11.27□□□□□ -0.6
MUC1-209ENST00000368396 CFAP74Q9C0B2 1584 aa11.27□□□□□ -0.61
MUC1-209ENST00000368396 INO80Q9ULG1 1556 aaPredicted RBP11.27□□□□□ -0.61
MUC1-209ENST00000368396 AFAP1Q8N556 730 aa11.26□□□□□ -0.61
MUC1-209ENST00000368396 SCAPERQ9BY12 1400 aa11.26□□□□□ -0.61
MUC1-209ENST00000368396 ATP7AQ04656 1500 aa11.25□□□□□ -0.61
MUC1-209ENST00000368396 CD109Q6YHK3 1445 aa11.25□□□□□ -0.61
MUC1-209ENST00000368396 RIMBP3CA6NJZ7 1639 aa11.24□□□□□ -0.61
MUC1-209ENST00000368396 RIMBP3BA6NNM3 1639 aa11.24□□□□□ -0.61
MUC1-209ENST00000368396 RIMBP3Q9UFD9 1639 aa11.24□□□□□ -0.61
MUC1-209ENST00000368396 NBPF8Q3BBV2 869 aa11.23□□□□□ -0.61
MUC1-209ENST00000368396 ATP10AO60312 1499 aa11.22□□□□□ -0.61
MUC1-209ENST00000368396 DEPDC5O75140 1603 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms