RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 CAMSAP2Q08AD1 1489 aa36.11■■■■□ 3.37
CLK2-203ENST00000368361 ERCC6L2Q5T890 1561 aa36.08■■■■□ 3.37
CLK2-203ENST00000368361 ROCK1Q13464 1354 aa36.07■■■■□ 3.36
CLK2-203ENST00000368361 TIMELESSQ9UNS1 1208 aa36.06■■■■□ 3.36
CLK2-203ENST00000368361 ABCC10Q5T3U5 1492 aa36.04■■■■□ 3.36
CLK2-203ENST00000368361 CDC42BPAQ5VT25 1732 aa36.03■■■■□ 3.36
CLK2-203ENST00000368361 CLASP1Q7Z460 1538 aa36.02■■■■□ 3.36
CLK2-203ENST00000368361 ZNF777Q9ULD5 760 aaPredicted RBP36■■■■□ 3.35
CLK2-203ENST00000368361 TRIM52Q96A61 297 aa35.96■■■■□ 3.35
CLK2-203ENST00000368361 DENND4BO75064 1496 aaPredicted RBP35.95■■■■□ 3.35
CLK2-203ENST00000368361 CROCC2H7BZ55 1655 aa35.92■■■■□ 3.34
CLK2-203ENST00000368361 ABCC2Q92887 1545 aa35.89■■■■□ 3.34
CLK2-203ENST00000368361 TONSLQ96HA7 1378 aa35.89■■■■□ 3.34
CLK2-203ENST00000368361 ADGBQ8N7X0 1667 aa35.88■■■■□ 3.34
CLK2-203ENST00000368361 PPP1R15AO75807 674 aaPredicted RBP35.88■■■■□ 3.33
CLK2-203ENST00000368361 MIER1Q8N108 512 aa35.88■■■■□ 3.33
CLK2-203ENST00000368361 NCOA1Q15788 1441 aa35.85■■■■□ 3.33
CLK2-203ENST00000368361 MPHOSPH9Q99550 1183 aa35.85■■■■□ 3.33
CLK2-203ENST00000368361 ADGRL2O95490 1459 aa35.83■■■■□ 3.33
CLK2-203ENST00000368361 ACIN1Q9UKV3 1341 aaKnown RBP35.79■■■■□ 3.32
CLK2-203ENST00000368361 CDC42BPBQ9Y5S2 1711 aa35.76■■■■□ 3.31
CLK2-203ENST00000368361 PREX2Q70Z35 1606 aa35.76■■■■□ 3.31
CLK2-203ENST00000368361 ANKRD30AQ9BXX3 1397 aa35.73■■■■□ 3.31
CLK2-203ENST00000368361 SHANK2Q9UPX8 1470 aa35.72■■■■□ 3.31
CLK2-203ENST00000368361 TTC37Q6PGP7 1564 aa35.71■■■■□ 3.31
CLK2-203ENST00000368361 FOXD1Q16676 465 aa35.7■■■■□ 3.31
CLK2-203ENST00000368361 KDM5BQ9UGL1 1544 aa35.69■■■■□ 3.3
CLK2-203ENST00000368361 SAMD9LQ8IVG5 1584 aa35.69■■■■□ 3.3
CLK2-203ENST00000368361 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.69■■■■□ 3.37e-15■■□□□ 14.1
CLK2-203ENST00000368361 C9orf84Q5VXU9 1444 aa35.69■■■■□ 3.3
CLK2-203ENST00000368361 UHRF1BP1LA0JNW5 1464 aa35.68■■■■□ 3.3
CLK2-203ENST00000368361 ZCCHC11Q5TAX3 1644 aaKnown RBP35.67■■■■□ 3.3
CLK2-203ENST00000368361 ARHGEF5Q12774 1597 aa35.66■■■■□ 3.3
CLK2-203ENST00000368361 HNRNPMP52272 730 aaKnown RBP eCLIP35.66■■■■□ 3.3
CLK2-203ENST00000368361 MBD5Q9P267 1494 aa35.65■■■■□ 3.3
CLK2-203ENST00000368361 SLC4A1APQ9BWU0 796 aaKnown RBP35.64■■■■□ 3.3
CLK2-203ENST00000368361 PZPP20742 1482 aa35.61■■■■□ 3.29
CLK2-203ENST00000368361 TSPY4P0CV99 314 aa35.61■■■■□ 3.29
CLK2-203ENST00000368361 TSPY10P0CW01 314 aa35.61■■■■□ 3.29
CLK2-203ENST00000368361 ANKRD50Q9ULJ7 1429 aa35.61■■■■□ 3.29
CLK2-203ENST00000368361 ANKRD30BQ9BXX2 1392 aa35.6■■■■□ 3.29
CLK2-203ENST00000368361 ARHGAP5Q13017 1502 aa35.59■■■■□ 3.29
CLK2-203ENST00000368361 MYO5CQ9NQX4 1742 aa35.57■■■■□ 3.29
CLK2-203ENST00000368361 KCNH8Q96L42 1107 aa35.57■■■■□ 3.28
CLK2-203ENST00000368361 CCDC141Q6ZP82 1450 aa35.56■■■■□ 3.28
CLK2-203ENST00000368361 SYCP2Q9BX26 1530 aa35.52■■■■□ 3.28
CLK2-203ENST00000368361 HIRIP3Q9BW71 556 aaPredicted RBP35.51■■■■□ 3.28
CLK2-203ENST00000368361 RPRD2Q5VT52 1461 aaKnown RBP35.51■■■■□ 3.27
CLK2-203ENST00000368361 CENPBP07199 599 aaPredicted RBP35.5■■■■□ 3.27
CLK2-203ENST00000368361 KIF15Q9NS87 1388 aa35.49■■■■□ 3.27
CLK2-203ENST00000368361 RSPH4AQ5TD94 716 aa35.49■■■■□ 3.27
CLK2-203ENST00000368361 YTHDC1Q96MU7 727 aaKnown RBP35.47■■■■□ 3.27
CLK2-203ENST00000368361 L3MBTL2Q969R5 705 aa35.45■■■■□ 3.27
CLK2-203ENST00000368361 KIAA1107Q9UPP5 1409 aa35.42■■■■□ 3.26
CLK2-203ENST00000368361 PLCH2O75038 1416 aa35.41■■■■□ 3.26
CLK2-203ENST00000368361 PLEKHH2Q8IVE3 1493 aa35.39■■■■□ 3.26
CLK2-203ENST00000368361 NUP155O75694 1391 aa35.39■■■■□ 3.26
CLK2-203ENST00000368361 TEX14Q8IWB6 1497 aa35.38■■■■□ 3.25
CLK2-203ENST00000368361 PKD2Q13563 968 aa35.38■■■■□ 3.25
CLK2-203ENST00000368361 MAST1Q9Y2H9 1570 aa35.38■■■■□ 3.25
CLK2-203ENST00000368361 DDX10Q13206 875 aaKnown RBP35.37■■■■□ 3.25
CLK2-203ENST00000368361 KDM5DQ9BY66 1539 aa35.36■■■■□ 3.25
CLK2-203ENST00000368361 SCAF1Q9H7N4 1312 aaKnown RBP35.35■■■■□ 3.25
CLK2-203ENST00000368361 ARHGEF12Q9NZN5 1544 aa35.34■■■■□ 3.25
CLK2-203ENST00000368361 OSCARQ8IYS5 282 aa35.32■■■■□ 3.25
CLK2-203ENST00000368361 EFCAB2Q5VUJ9 269 aa35.3■■■■□ 3.24
CLK2-203ENST00000368361 WDR7Q9Y4E6 1490 aa35.29■■■■□ 3.24
CLK2-203ENST00000368361 PLXNC1O60486 1568 aa35.26■■■■□ 3.24
CLK2-203ENST00000368361 ABCC1P33527 1531 aa35.26■■■■□ 3.23
CLK2-203ENST00000368361 NBPF8Q3BBV2 869 aa35.22■■■■□ 3.23
CLK2-203ENST00000368361 ARAP3Q8WWN8 1544 aa35.2■■■■□ 3.23
CLK2-203ENST00000368361 HSPA5P11021 654 aaKnown RBP35.19■■■■□ 3.22
CLK2-203ENST00000368361 FAM135AQ9P2D6 1515 aa35.18■■■■□ 3.22
CLK2-203ENST00000368361 TRAPPC8Q9Y2L5 1435 aa35.17■■■■□ 3.22
CLK2-203ENST00000368361 UNC13BO14795 1591 aa35.15■■■■□ 3.22
CLK2-203ENST00000368361 EIF4G2P78344 907 aaKnown RBP eCLIP35.15■■■■□ 3.22
CLK2-203ENST00000368361 ABCA9Q8IUA7 1624 aa35.14■■■■□ 3.22
CLK2-203ENST00000368361 DUOX2Q9NRD8 1548 aa35.13■■■■□ 3.21
CLK2-203ENST00000368361 ASXL2Q76L83 1435 aa35.13■■■■□ 3.21
CLK2-203ENST00000368361 ERBINQ96RT1 1412 aa35.06■■■■□ 3.2
CLK2-203ENST00000368361 FANCAO15360 1455 aa35.06■■■■□ 3.2
CLK2-203ENST00000368361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.04■■■■□ 3.22e-7■■■□□ 15
CLK2-203ENST00000368361 AFAP1Q8N556 730 aa35.03■■■■□ 3.2
CLK2-203ENST00000368361 WASHC2AQ641Q2 1341 aa35.02■■■■□ 3.2
CLK2-203ENST00000368361 IQGAP3Q86VI3 1631 aa35.02■■■■□ 3.2
CLK2-203ENST00000368361 SPAG9O60271 1321 aaKnown RBP35■■■■□ 3.19
CLK2-203ENST00000368361 ZFYVE16Q7Z3T8 1539 aa34.99■■■■□ 3.19
CLK2-203ENST00000368361 MAGI2Q86UL8 1455 aa34.99■■■■□ 3.19
CLK2-203ENST00000368361 GTF3C3Q9Y5Q9 886 aa34.98■■■■□ 3.19
CLK2-203ENST00000368361 RTEL1-TNFRSF6BF6WH68 1400 aa34.98■■■■□ 3.19
CLK2-203ENST00000368361 NPM1P06748 294 aaKnown RBP eCLIP34.97■■■■□ 3.19
CLK2-203ENST00000368361 SPATA31E1Q6ZUB1 1445 aa34.96■■■■□ 3.19
CLK2-203ENST00000368361 ANP32CO43423 234 aa34.96■■■■□ 3.19
CLK2-203ENST00000368361 ZNF326Q5BKZ1 582 aaKnown RBP34.95■■■■□ 3.19
CLK2-203ENST00000368361 ADGRL1O94910 1474 aa34.92■■■■□ 3.18
CLK2-203ENST00000368361 UHRF1BP1Q6BDS2 1440 aa34.92■■■■□ 3.18
CLK2-203ENST00000368361 PLA2R1Q13018 1463 aa34.89■■■■□ 3.18
CLK2-203ENST00000368361 C11orf95C9JLR9 678 aaPredicted RBP34.89■■■■□ 3.18
CLK2-203ENST00000368361 CCDC144AA2RUR9 1427 aa34.89■■■■□ 3.18
CLK2-203ENST00000368361 SCAPERQ9BY12 1400 aa34.88■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms