RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 KIF14Q15058 1648 aa26■■□□□ 1.75
LMNA-207ENST00000368301 DNMT1P26358 1616 aaKnown RBP25.99■■□□□ 1.75
LMNA-207ENST00000368301 ABCA8O94911 1581 aa25.94■■□□□ 1.74
LMNA-207ENST00000368301 GPATCH8Q9UKJ3 1502 aaKnown RBP25.94■■□□□ 1.74
LMNA-207ENST00000368301 KDM5BQ9UGL1 1544 aa25.93■■□□□ 1.74
LMNA-207ENST00000368301 CFDP1Q9UEE9 299 aaPredicted RBP25.92■■□□□ 1.74
LMNA-207ENST00000368301 ROCK1Q13464 1354 aa25.92■■□□□ 1.74
LMNA-207ENST00000368301 CAMSAP2Q08AD1 1489 aa25.92■■□□□ 1.74
LMNA-207ENST00000368301 ADCY10Q96PN6 1610 aa25.91■■□□□ 1.74
LMNA-207ENST00000368301 MPHOSPH9Q99550 1183 aa25.91■■□□□ 1.74
LMNA-207ENST00000368301 DDX10Q13206 875 aaKnown RBP25.9■■□□□ 1.74
LMNA-207ENST00000368301 FOXD1Q16676 465 aa25.9■■□□□ 1.74
LMNA-207ENST00000368301 ATP10BO94823 1461 aa25.89■■□□□ 1.74
LMNA-207ENST00000368301 ZNF777Q9ULD5 760 aaPredicted RBP25.89■■□□□ 1.73
LMNA-207ENST00000368301 ITSN2Q9NZM3 1697 aa25.87■■□□□ 1.73
LMNA-207ENST00000368301 CHD1O14646 1710 aa25.87■■□□□ 1.73
LMNA-207ENST00000368301 PLEKHD1A6NEE1 506 aa25.82■■□□□ 1.72
LMNA-207ENST00000368301 KCNH8Q96L42 1107 aa25.82■■□□□ 1.72
LMNA-207ENST00000368301 PTPRGP23470 1445 aa25.8■■□□□ 1.72
LMNA-207ENST00000368301 ABCC10Q5T3U5 1492 aa25.79■■□□□ 1.72
LMNA-207ENST00000368301 CDC42BPAQ5VT25 1732 aa25.79■■□□□ 1.72
LMNA-207ENST00000368301 NCOA1Q15788 1441 aa25.77■■□□□ 1.72
LMNA-207ENST00000368301 CROCC2H7BZ55 1655 aa25.75■■□□□ 1.71
LMNA-207ENST00000368301 ADGBQ8N7X0 1667 aa25.74■■□□□ 1.71
LMNA-207ENST00000368301 ANKRD30BQ9BXX2 1392 aa25.73■■□□□ 1.71
LMNA-207ENST00000368301 SLC4A1APQ9BWU0 796 aaKnown RBP25.72■■□□□ 1.71
LMNA-207ENST00000368301 L3MBTL2Q969R5 705 aa25.72■■□□□ 1.71
LMNA-207ENST00000368301 ADGRL2O95490 1459 aa25.7■■□□□ 1.71
LMNA-207ENST00000368301 PZPP20742 1482 aa25.7■■□□□ 1.7
LMNA-207ENST00000368301 ERCC6L2Q5T890 1561 aa25.7■■□□□ 1.7
LMNA-207ENST00000368301 SHROOM2Q13796 1616 aa25.67■■□□□ 1.7
LMNA-207ENST00000368301 RPRD2Q5VT52 1461 aaKnown RBP25.65■■□□□ 1.7
LMNA-207ENST00000368301 ANKRD30AQ9BXX3 1397 aa25.64■■□□□ 1.7
LMNA-207ENST00000368301 HSPA5P11021 654 aaKnown RBP25.62■■□□□ 1.69
LMNA-207ENST00000368301 HNRNPMP52272 730 aaKnown RBP eCLIP25.62■■□□□ 1.69
LMNA-207ENST00000368301 C9orf84Q5VXU9 1444 aa25.61■■□□□ 1.69
LMNA-207ENST00000368301 TEX14Q8IWB6 1497 aa25.61■■□□□ 1.69
LMNA-207ENST00000368301 ANKRD50Q9ULJ7 1429 aa25.6■■□□□ 1.69
LMNA-207ENST00000368301 NBPF8Q3BBV2 869 aa25.58■■□□□ 1.69
LMNA-207ENST00000368301 SHANK2Q9UPX8 1470 aa25.57■■□□□ 1.68
LMNA-207ENST00000368301 CDC42BPBQ9Y5S2 1711 aa25.56■■□□□ 1.68
LMNA-207ENST00000368301 SAMD9LQ8IVG5 1584 aa25.55■■□□□ 1.68
LMNA-207ENST00000368301 MBD5Q9P267 1494 aa25.55■■□□□ 1.68
LMNA-207ENST00000368301 PKD2Q13563 968 aa25.54■■□□□ 1.68
LMNA-207ENST00000368301 PREX2Q70Z35 1606 aa25.53■■□□□ 1.68
LMNA-207ENST00000368301 ANP32CO43423 234 aa25.53■■□□□ 1.68
LMNA-207ENST00000368301 KIAA1107Q9UPP5 1409 aa25.53■■□□□ 1.68
LMNA-207ENST00000368301 WASHC2AQ641Q2 1341 aa25.53■■□□□ 1.68
LMNA-207ENST00000368301 TSPY4P0CV99 314 aa25.53■■□□□ 1.68
LMNA-207ENST00000368301 TSPY10P0CW01 314 aa25.53■■□□□ 1.68
LMNA-207ENST00000368301 EIF4G2P78344 907 aaKnown RBP eCLIP25.52■■□□□ 1.68
LMNA-207ENST00000368301 TTC37Q6PGP7 1564 aa25.52■■□□□ 1.68
LMNA-207ENST00000368301 ABCC2Q92887 1545 aa25.51■■□□□ 1.67
LMNA-207ENST00000368301 ARHGEF5Q12774 1597 aa25.51■■□□□ 1.67
LMNA-207ENST00000368301 KIF15Q9NS87 1388 aa25.49■■□□□ 1.67
LMNA-207ENST00000368301 NUP155O75694 1391 aa25.48■■□□□ 1.67
LMNA-207ENST00000368301 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.48■■□□□ 1.677e-7■■□□□ 11.7
LMNA-207ENST00000368301 CLASP1Q7Z460 1538 aa25.47■■□□□ 1.67
LMNA-207ENST00000368301 C11orf95C9JLR9 678 aaPredicted RBP25.46■■□□□ 1.67
LMNA-207ENST00000368301 CCDC141Q6ZP82 1450 aa25.46■■□□□ 1.67
LMNA-207ENST00000368301 CCER2I3L3R5 266 aa25.44■■□□□ 1.66
LMNA-207ENST00000368301 ARHGAP5Q13017 1502 aa25.43■■□□□ 1.66
LMNA-207ENST00000368301 SYCP2Q9BX26 1530 aa25.43■■□□□ 1.66
LMNA-207ENST00000368301 KDM5DQ9BY66 1539 aa25.39■■□□□ 1.65
LMNA-207ENST00000368301 ZCCHC11Q5TAX3 1644 aaKnown RBP25.37■■□□□ 1.65
LMNA-207ENST00000368301 SPATA31E1Q6ZUB1 1445 aa25.36■■□□□ 1.65
LMNA-207ENST00000368301 ZNF326Q5BKZ1 582 aaKnown RBP25.36■■□□□ 1.65
LMNA-207ENST00000368301 MYO5CQ9NQX4 1742 aa25.36■■□□□ 1.65
LMNA-207ENST00000368301 CCDC7Q96M83 1385 aa25.35■■□□□ 1.65
LMNA-207ENST00000368301 RSPH4AQ5TD94 716 aa25.32■■□□□ 1.64
LMNA-207ENST00000368301 ARHGEF12Q9NZN5 1544 aa25.32■■□□□ 1.64
LMNA-207ENST00000368301 CNTLNQ9NXG0 1405 aa25.3■■□□□ 1.64
LMNA-207ENST00000368301 UHRF1BP1LA0JNW5 1464 aa25.3■■□□□ 1.64
LMNA-207ENST00000368301 SUPT16HQ9Y5B9 1047 aaKnown RBP25.29■■□□□ 1.64
LMNA-207ENST00000368301 MAST1Q9Y2H9 1570 aa25.28■■□□□ 1.64
LMNA-207ENST00000368301 FAM135AQ9P2D6 1515 aa25.28■■□□□ 1.64
LMNA-207ENST00000368301 KIF7Q2M1P5 1343 aa25.27■■□□□ 1.64
LMNA-207ENST00000368301 PLCH2O75038 1416 aa25.25■■□□□ 1.63
LMNA-207ENST00000368301 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.23■■□□□ 1.632e-8■■■□□ 16.1
LMNA-207ENST00000368301 PLEKHH2Q8IVE3 1493 aa25.23■■□□□ 1.63
LMNA-207ENST00000368301 USP47Q96K76 1375 aa25.22■■□□□ 1.63
LMNA-207ENST00000368301 KDM2AQ9Y2K7 1162 aa25.21■■□□□ 1.63
LMNA-207ENST00000368301 UHRF1BP1Q6BDS2 1440 aa25.2■■□□□ 1.63
LMNA-207ENST00000368301 PLXNC1O60486 1568 aa25.2■■□□□ 1.62
LMNA-207ENST00000368301 UNC13BO14795 1591 aa25.2■■□□□ 1.62
LMNA-207ENST00000368301 POLR1AO95602 1720 aaPredicted RBP25.2■■□□□ 1.62
LMNA-207ENST00000368301 BCORL1Q5H9F3 1711 aa25.2■■□□□ 1.62
LMNA-207ENST00000368301 CCDC184Q52MB2 194 aa25.19■■□□□ 1.62
LMNA-207ENST00000368301 EFCAB2Q5VUJ9 269 aa25.19■■□□□ 1.62
LMNA-207ENST00000368301 TRAPPC8Q9Y2L5 1435 aa25.18■■□□□ 1.62
LMNA-207ENST00000368301 KDM5CP41229 1560 aa25.17■■□□□ 1.62
LMNA-207ENST00000368301 ABCC1P33527 1531 aa25.17■■□□□ 1.62
LMNA-207ENST00000368301 DCAF11Q8TEB1 546 aa25.16■■□□□ 1.62
LMNA-207ENST00000368301 RALGAPBQ86X10 1494 aa25.16■■□□□ 1.62
LMNA-207ENST00000368301 PLA2R1Q13018 1463 aa25.15■■□□□ 1.62
LMNA-207ENST00000368301 PRKRIP1Q9H875 184 aaPredicted RBP25.14■■□□□ 1.62
LMNA-207ENST00000368301 DUOX2Q9NRD8 1548 aa25.13■■□□□ 1.61
LMNA-207ENST00000368301 PELP1Q8IZL8 1130 aaKnown RBP25.12■■□□□ 1.61
LMNA-207ENST00000368301 POLR3GLQ9BT43 218 aa25.11■■□□□ 1.61
LMNA-207ENST00000368301 CARD11Q9BXL7 1154 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms