RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 CFDP1Q9UEE9 299 aaPredicted RBP25.26■■□□□ 1.63
LMNA-205ENST00000368299 NEUROD1Q13562 356 aa25.25■■□□□ 1.63
LMNA-205ENST00000368299 CAMSAP2Q08AD1 1489 aa25.23■■□□□ 1.63
LMNA-205ENST00000368299 ZNF644Q9H582 1327 aaPredicted RBP25.22■■□□□ 1.63
LMNA-205ENST00000368299 ABCC10Q5T3U5 1492 aa25.2■■□□□ 1.62
LMNA-205ENST00000368299 CLASP1Q7Z460 1538 aa25.16■■□□□ 1.62
LMNA-205ENST00000368299 KDM6BO15054 1643 aa25.15■■□□□ 1.62
LMNA-205ENST00000368299 TONSLQ96HA7 1378 aa25.14■■□□□ 1.62
LMNA-205ENST00000368299 CDC42BPAQ5VT25 1732 aa25.14■■□□□ 1.62
LMNA-205ENST00000368299 PPP1R15AO75807 674 aaPredicted RBP25.13■■□□□ 1.61
LMNA-205ENST00000368299 TRIM52Q96A61 297 aa25.13■■□□□ 1.61
LMNA-205ENST00000368299 ADGRL2O95490 1459 aa25.11■■□□□ 1.61
LMNA-205ENST00000368299 ADGBQ8N7X0 1667 aa25.11■■□□□ 1.61
LMNA-205ENST00000368299 CROCC2H7BZ55 1655 aa25.1■■□□□ 1.61
LMNA-205ENST00000368299 ABCC2Q92887 1545 aa25.1■■□□□ 1.61
LMNA-205ENST00000368299 CENPBP07199 599 aaPredicted RBP25.1■■□□□ 1.61
LMNA-205ENST00000368299 ZNF777Q9ULD5 760 aaPredicted RBP25.1■■□□□ 1.61
LMNA-205ENST00000368299 PELP1Q8IZL8 1130 aaKnown RBP25.09■■□□□ 1.61
LMNA-205ENST00000368299 NCOA1Q15788 1441 aa25.08■■□□□ 1.61
LMNA-205ENST00000368299 ERCC6L2Q5T890 1561 aa25.08■■□□□ 1.61
LMNA-205ENST00000368299 MPHOSPH9Q99550 1183 aa25.07■■□□□ 1.6
LMNA-205ENST00000368299 DENND4BO75064 1496 aaPredicted RBP25.07■■□□□ 1.6
LMNA-205ENST00000368299 MIER1Q8N108 512 aa25.06■■□□□ 1.6
LMNA-205ENST00000368299 SHANK2Q9UPX8 1470 aa25.06■■□□□ 1.6
LMNA-205ENST00000368299 ANKRD30AQ9BXX3 1397 aa25.04■■□□□ 1.6
LMNA-205ENST00000368299 UHRF1BP1LA0JNW5 1464 aa25.01■■□□□ 1.59
LMNA-205ENST00000368299 PREX2Q70Z35 1606 aa24.99■■□□□ 1.59
LMNA-205ENST00000368299 ARHGEF5Q12774 1597 aa24.99■■□□□ 1.59
LMNA-205ENST00000368299 C9orf84Q5VXU9 1444 aa24.96■■□□□ 1.59
LMNA-205ENST00000368299 TSPY4P0CV99 314 aa24.95■■□□□ 1.58
LMNA-205ENST00000368299 TSPY10P0CW01 314 aa24.95■■□□□ 1.58
LMNA-205ENST00000368299 RSPH4AQ5TD94 716 aa24.95■■□□□ 1.58
LMNA-205ENST00000368299 CDC42BPBQ9Y5S2 1711 aa24.94■■□□□ 1.58
LMNA-205ENST00000368299 MBD5Q9P267 1494 aa24.92■■□□□ 1.58
LMNA-205ENST00000368299 KDM5BQ9UGL1 1544 aa24.92■■□□□ 1.58
LMNA-205ENST00000368299 SLC4A1APQ9BWU0 796 aaKnown RBP24.92■■□□□ 1.58
LMNA-205ENST00000368299 ANKRD50Q9ULJ7 1429 aa24.92■■□□□ 1.58
LMNA-205ENST00000368299 ANKRD30BQ9BXX2 1392 aa24.92■■□□□ 1.58
LMNA-205ENST00000368299 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.92■■□□□ 1.587e-7■■□□□ 11.7
LMNA-205ENST00000368299 SAMD9LQ8IVG5 1584 aa24.91■■□□□ 1.58
LMNA-205ENST00000368299 CCDC141Q6ZP82 1450 aa24.9■■□□□ 1.58
LMNA-205ENST00000368299 TTC37Q6PGP7 1564 aa24.89■■□□□ 1.58
LMNA-205ENST00000368299 PZPP20742 1482 aa24.89■■□□□ 1.57
LMNA-205ENST00000368299 ZCCHC11Q5TAX3 1644 aaKnown RBP24.88■■□□□ 1.57
LMNA-205ENST00000368299 RPRD2Q5VT52 1461 aaKnown RBP24.87■■□□□ 1.57
LMNA-205ENST00000368299 GTF3C3Q9Y5Q9 886 aa24.87■■□□□ 1.57
LMNA-205ENST00000368299 ARHGAP5Q13017 1502 aa24.86■■□□□ 1.57
LMNA-205ENST00000368299 PLEKHH2Q8IVE3 1493 aa24.86■■□□□ 1.57
LMNA-205ENST00000368299 HNRNPMP52272 730 aaKnown RBP eCLIP24.86■■□□□ 1.57
LMNA-205ENST00000368299 MYO5CQ9NQX4 1742 aa24.85■■□□□ 1.57
LMNA-205ENST00000368299 FOXD1Q16676 465 aa24.83■■□□□ 1.57
LMNA-205ENST00000368299 KIAA1107Q9UPP5 1409 aa24.83■■□□□ 1.57
LMNA-205ENST00000368299 KIF15Q9NS87 1388 aa24.82■■□□□ 1.56
LMNA-205ENST00000368299 MAST1Q9Y2H9 1570 aa24.8■■□□□ 1.56
LMNA-205ENST00000368299 SYCP2Q9BX26 1530 aa24.79■■□□□ 1.56
LMNA-205ENST00000368299 KDM5DQ9BY66 1539 aa24.79■■□□□ 1.56
LMNA-205ENST00000368299 PLCH2O75038 1416 aa24.79■■□□□ 1.56
LMNA-205ENST00000368299 L3MBTL2Q969R5 705 aa24.77■■□□□ 1.56
LMNA-205ENST00000368299 KCNH8Q96L42 1107 aa24.77■■□□□ 1.56
LMNA-205ENST00000368299 TEX14Q8IWB6 1497 aa24.75■■□□□ 1.55
LMNA-205ENST00000368299 NUP155O75694 1391 aa24.75■■□□□ 1.55
LMNA-205ENST00000368299 PKD2Q13563 968 aa24.73■■□□□ 1.55
LMNA-205ENST00000368299 YTHDC1Q96MU7 727 aaKnown RBP24.73■■□□□ 1.55
LMNA-205ENST00000368299 EFCAB2Q5VUJ9 269 aa24.72■■□□□ 1.55
LMNA-205ENST00000368299 ARAP3Q8WWN8 1544 aa24.71■■□□□ 1.55
LMNA-205ENST00000368299 DDX10Q13206 875 aaKnown RBP24.71■■□□□ 1.55
LMNA-205ENST00000368299 PLXNC1O60486 1568 aa24.7■■□□□ 1.54
LMNA-205ENST00000368299 OSCARQ8IYS5 282 aa24.69■■□□□ 1.54
LMNA-205ENST00000368299 HIRIP3Q9BW71 556 aaPredicted RBP24.68■■□□□ 1.54
LMNA-205ENST00000368299 WDR7Q9Y4E6 1490 aa24.68■■□□□ 1.54
LMNA-205ENST00000368299 ABCC1P33527 1531 aa24.65■■□□□ 1.54
LMNA-205ENST00000368299 EIF4G2P78344 907 aaKnown RBP eCLIP24.64■■□□□ 1.54
LMNA-205ENST00000368299 ARHGEF12Q9NZN5 1544 aa24.64■■□□□ 1.53
LMNA-205ENST00000368299 DUOX2Q9NRD8 1548 aa24.61■■□□□ 1.53
LMNA-205ENST00000368299 UNC13BO14795 1591 aa24.6■■□□□ 1.53
LMNA-205ENST00000368299 FAM135AQ9P2D6 1515 aa24.6■■□□□ 1.53
LMNA-205ENST00000368299 HSPA5P11021 654 aaKnown RBP24.6■■□□□ 1.53
LMNA-205ENST00000368299 ERBINQ96RT1 1412 aa24.58■■□□□ 1.53
LMNA-205ENST00000368299 NBPF8Q3BBV2 869 aa24.58■■□□□ 1.52
LMNA-205ENST00000368299 ABCA9Q8IUA7 1624 aa24.57■■□□□ 1.52
LMNA-205ENST00000368299 RTEL1-TNFRSF6BF6WH68 1400 aa24.54■■□□□ 1.52
LMNA-205ENST00000368299 TRAPPC8Q9Y2L5 1435 aa24.53■■□□□ 1.52
LMNA-205ENST00000368299 ASXL2Q76L83 1435 aa24.53■■□□□ 1.52
LMNA-205ENST00000368299 ANP32CO43423 234 aa24.52■■□□□ 1.52
LMNA-205ENST00000368299 IQGAP3Q86VI3 1631 aa24.51■■□□□ 1.51
LMNA-205ENST00000368299 MAGI2Q86UL8 1455 aa24.5■■□□□ 1.51
LMNA-205ENST00000368299 FANCAO15360 1455 aa24.5■■□□□ 1.51
LMNA-205ENST00000368299 NPM1P06748 294 aaKnown RBP eCLIP24.49■■□□□ 1.51
LMNA-205ENST00000368299 UHRF1BP1Q6BDS2 1440 aa24.49■■□□□ 1.51
LMNA-205ENST00000368299 SPAG9O60271 1321 aaKnown RBP24.48■■□□□ 1.51
LMNA-205ENST00000368299 CCER2I3L3R5 266 aa24.48■■□□□ 1.51
LMNA-205ENST00000368299 SPATA31E1Q6ZUB1 1445 aa24.48■■□□□ 1.51
LMNA-205ENST00000368299 WASHC2AQ641Q2 1341 aa24.47■■□□□ 1.51
LMNA-205ENST00000368299 ZFYVE16Q7Z3T8 1539 aa24.45■■□□□ 1.51
LMNA-205ENST00000368299 CCDC144AA2RUR9 1427 aa24.43■■□□□ 1.5
LMNA-205ENST00000368299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.42■■□□□ 1.52e-8■■■□□ 16.1
LMNA-205ENST00000368299 AFAP1Q8N556 730 aa24.42■■□□□ 1.5
LMNA-205ENST00000368299 ADGRL1O94910 1474 aa24.41■■□□□ 1.5
LMNA-205ENST00000368299 ATP10AO60312 1499 aa24.4■■□□□ 1.5
LMNA-205ENST00000368299 RALGAPBQ86X10 1494 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms