RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 PTMAP06454 111 aaKnown RBP9.08□□□□□ -0.96
SPTA1-201ENST00000368147 RGS3P49796 1198 aa9.07□□□□□ -0.96
SPTA1-201ENST00000368147 CDCA8Q53HL2 280 aa9.07□□□□□ -0.96
SPTA1-201ENST00000368147 CCNB3Q8WWL7 1395 aa9.07□□□□□ -0.96
SPTA1-201ENST00000368147 ACIN1Q9UKV3 1341 aaKnown RBP9.07□□□□□ -0.96
SPTA1-201ENST00000368147 SIN3AQ96ST3 1273 aa9.06□□□□□ -0.96
SPTA1-201ENST00000368147 BECN1Q14457 450 aa9.06□□□□□ -0.96
SPTA1-201ENST00000368147 TAF7LQ5H9L4 462 aa9.05□□□□□ -0.96
SPTA1-201ENST00000368147 MORC1Q86VD1 984 aa9.05□□□□□ -0.96
SPTA1-201ENST00000368147 GNL2Q13823 731 aaKnown RBP9.05□□□□□ -0.96
SPTA1-201ENST00000368147 FBXW7Q969H0 707 aa9.05□□□□□ -0.96
SPTA1-201ENST00000368147 SYTL4Q96C24 671 aaPredicted RBP9.04□□□□□ -0.96
SPTA1-201ENST00000368147 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.04□□□□□ -0.96
SPTA1-201ENST00000368147 MIER1Q8N108 512 aa9.04□□□□□ -0.96
SPTA1-201ENST00000368147 DDRGK1Q96HY6 314 aa9.04□□□□□ -0.96
SPTA1-201ENST00000368147 EID1Q9Y6B2 187 aa9.04□□□□□ -0.96
SPTA1-201ENST00000368147 SETQ01105 290 aaPredicted RBP9.03□□□□□ -0.96
SPTA1-201ENST00000368147 VPS53Q5VIR6 699 aa9.03□□□□□ -0.96
SPTA1-201ENST00000368147 PRDM2Q13029 1718 aa9.03□□□□□ -0.96
SPTA1-201ENST00000368147 GTF2E1P29083 439 aaPredicted RBP9.03□□□□□ -0.96
SPTA1-201ENST00000368147 NGDNQ8NEJ9 315 aaKnown RBP9.03□□□□□ -0.96
SPTA1-201ENST00000368147 NAP1L5Q96NT1 182 aaPredicted RBP9.03□□□□□ -0.96
SPTA1-201ENST00000368147 HSP90AB1P08238 724 aaKnown RBP9.02□□□□□ -0.96
SPTA1-201ENST00000368147 NGEFQ8N5V2 710 aa9.02□□□□□ -0.96
SPTA1-201ENST00000368147 KIF27Q86VH2 1401 aa9.02□□□□□ -0.97
SPTA1-201ENST00000368147 RAD21O60216 631 aa9.02□□□□□ -0.97
SPTA1-201ENST00000368147 PPP1R1BQ9UD71 204 aaPredicted RBP9.02□□□□□ -0.97
SPTA1-201ENST00000368147 CECR2Q9BXF3 1484 aa9.02□□□□□ -0.97
SPTA1-201ENST00000368147 FRAT2O75474 233 aaPredicted RBP9.02□□□□□ -0.97
SPTA1-201ENST00000368147 HDGFL2Q7Z4V5 671 aaPredicted RBP9.02□□□□□ -0.97
SPTA1-201ENST00000368147 GORABQ5T7V8 394 aa9.02□□□□□ -0.97
SPTA1-201ENST00000368147 GOLGA3Q08378 1498 aa9.01□□□□□ -0.97
SPTA1-201ENST00000368147 HNRNPMP52272 730 aaKnown RBP eCLIP9□□□□□ -0.97
SPTA1-201ENST00000368147 PNNQ9H307 717 aaKnown RBP9□□□□□ -0.97
SPTA1-201ENST00000368147 SUPT16HQ9Y5B9 1047 aaKnown RBP9□□□□□ -0.97
SPTA1-201ENST00000368147 TMF1P82094 1093 aa9□□□□□ -0.97
SPTA1-201ENST00000368147 CUX2O14529 1486 aa9□□□□□ -0.97
SPTA1-201ENST00000368147 B4GALNT3Q6L9W6 998 aa8.99□□□□□ -0.97
SPTA1-201ENST00000368147 WRNQ14191 1432 aaPredicted RBP eCLIP8.99□□□□□ -0.97
SPTA1-201ENST00000368147 KRI1Q8N9T8 703 aaKnown RBP8.99□□□□□ -0.97
SPTA1-201ENST00000368147 KIF3BO15066 747 aa8.98□□□□□ -0.97
SPTA1-201ENST00000368147 SAMD1Q6SPF0 538 aaPredicted RBP8.98□□□□□ -0.97
SPTA1-201ENST00000368147 WWC1Q8IX03 1113 aa8.98□□□□□ -0.97
SPTA1-201ENST00000368147 AMPHP49418 695 aa8.98□□□□□ -0.97
SPTA1-201ENST00000368147 CEP162Q5TB80 1403 aa8.98□□□□□ -0.97
SPTA1-201ENST00000368147 CREBRFQ8IUR6 639 aa8.97□□□□□ -0.97
SPTA1-201ENST00000368147 SLC4A10Q6U841 1118 aa8.97□□□□□ -0.97
SPTA1-201ENST00000368147 FBXO3Q9UK99 471 aa8.97□□□□□ -0.97
SPTA1-201ENST00000368147 SMARCA2P51531 1590 aa8.97□□□□□ -0.97
SPTA1-201ENST00000368147 NACADO15069 1562 aa8.97□□□□□ -0.97
SPTA1-201ENST00000368147 KIAA2012Q0VF49 1180 aa8.97□□□□□ -0.97
SPTA1-201ENST00000368147 WASHC2CQ9Y4E1 1318 aa8.97□□□□□ -0.97
SPTA1-201ENST00000368147 DCAF8L1A6NGE4 600 aa8.97□□□□□ -0.97
SPTA1-201ENST00000368147 GOLGA6L1Q8N7Z2 621 aa8.96□□□□□ -0.97
SPTA1-201ENST00000368147 KAT6BQ8WYB5 2073 aa8.96□□□□□ -0.98
SPTA1-201ENST00000368147 HSP90B1P14625 803 aaKnown RBP8.95□□□□□ -0.98
SPTA1-201ENST00000368147 NOC3LQ8WTT2 800 aaKnown RBP8.95□□□□□ -0.98
SPTA1-201ENST00000368147 GOLGA6L4A6NEF3 574 aa8.95□□□□□ -0.98
SPTA1-201ENST00000368147 PIP4K2BP78356 416 aa8.94□□□□□ -0.98
SPTA1-201ENST00000368147 DRC7Q8IY82 874 aa8.94□□□□□ -0.98
SPTA1-201ENST00000368147 DCAF1Q9Y4B6 1507 aa8.94□□□□□ -0.98
SPTA1-201ENST00000368147 TOMM22Q9NS69 142 aa8.94□□□□□ -0.98
SPTA1-201ENST00000368147 U2AF1L5P0DN76 240 aaPredicted RBP8.94□□□□□ -0.98
SPTA1-201ENST00000368147 U2AF1Q01081 240 aaKnown RBP eCLIP8.94□□□□□ -0.983e-7■■□□□ 14.4
SPTA1-201ENST00000368147 CWC22Q9HCG8 908 aaKnown RBP8.94□□□□□ -0.98
SPTA1-201ENST00000368147 CCDC146Q8IYE0 955 aa8.94□□□□□ -0.98
SPTA1-201ENST00000368147 ABCC8Q09428 1581 aa8.94□□□□□ -0.98
SPTA1-201ENST00000368147 ROCK2O75116 1388 aaKnown RBP8.93□□□□□ -0.98
SPTA1-201ENST00000368147 PKD2Q13563 968 aa8.93□□□□□ -0.98
SPTA1-201ENST00000368147 NECTIN2Q92692 538 aa8.93□□□□□ -0.98
SPTA1-201ENST00000368147 TDRD9Q8NDG6 1382 aaKnown RBP8.93□□□□□ -0.98
SPTA1-201ENST00000368147 NOL8Q76FK4 1167 aaKnown RBP8.92□□□□□ -0.98
SPTA1-201ENST00000368147 TRIM6-TRIM34B2RNG4 842 aa8.92□□□□□ -0.98
SPTA1-201ENST00000368147 STK11IPQ8N1F8 1099 aa8.92□□□□□ -0.98
SPTA1-201ENST00000368147 ITPRIPQ8IWB1 547 aa8.92□□□□□ -0.98
SPTA1-201ENST00000368147 CARMIL2Q6F5E8 1435 aa8.92□□□□□ -0.98
SPTA1-201ENST00000368147 CARMIL1Q5VZK9 1371 aa8.92□□□□□ -0.98
SPTA1-201ENST00000368147 NUTM2BA6NNL0 878 aaPredicted RBP8.92□□□□□ -0.98
SPTA1-201ENST00000368147 NUTM2EB1AL46 878 aaPredicted RBP8.92□□□□□ -0.98
SPTA1-201ENST00000368147 NUTM2AQ8IVF1 878 aaPredicted RBP8.92□□□□□ -0.98
SPTA1-201ENST00000368147 MSNP26038 577 aaKnown RBP8.91□□□□□ -0.98
SPTA1-201ENST00000368147 TRAK1Q9UPV9 953 aa8.91□□□□□ -0.98
SPTA1-201ENST00000368147 A0A0U1RQG5 324 aaPredicted RBP8.91□□□□□ -0.98
SPTA1-201ENST00000368147 KIAA1211Q6ZU35 1233 aa8.91□□□□□ -0.98
SPTA1-201ENST00000368147 TRIM34Q9BYJ4 488 aa8.91□□□□□ -0.98
SPTA1-201ENST00000368147 NUTM2GQ5VZR2 741 aa8.91□□□□□ -0.98
SPTA1-201ENST00000368147 CNKSR2Q8WXI2 1034 aa8.91□□□□□ -0.98
SPTA1-201ENST00000368147 SOGA1O94964 1423 aa8.9□□□□□ -0.98
SPTA1-201ENST00000368147 SPAG9O60271 1321 aaKnown RBP8.9□□□□□ -0.98
SPTA1-201ENST00000368147 MCCP23508 829 aa8.9□□□□□ -0.99
SPTA1-201ENST00000368147 PSME1Q06323 249 aa8.89□□□□□ -0.99
SPTA1-201ENST00000368147 FAM69CQ0P6D2 419 aa8.89□□□□□ -0.99
SPTA1-201ENST00000368147 RASSF8Q8NHQ8 419 aa8.89□□□□□ -0.99
SPTA1-201ENST00000368147 CTDP1Q9Y5B0 961 aaPredicted RBP8.89□□□□□ -0.99
SPTA1-201ENST00000368147 MYO15BQ96JP2 1530 aa8.89□□□□□ -0.99
SPTA1-201ENST00000368147 MARCH6O60337 910 aa8.89□□□□□ -0.99
SPTA1-201ENST00000368147 C1orf141Q5JVX7 400 aa8.88□□□□□ -0.99
SPTA1-201ENST00000368147 RTN4Q9NQC3 1192 aaKnown RBP8.88□□□□□ -0.99
SPTA1-201ENST00000368147 ZNF428Q96B54 188 aa8.87□□□□□ -0.99
SPTA1-201ENST00000368147 EFCAB2Q5VUJ9 269 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms