RNA–Protein interactions for RNA: ENST00000366794.9

PARP1-203, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP1, Length 3,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-203ENST00000366794 PRKRIP1Q9H875 184 aaPredicted RBP18.98■□□□□ 0.63
PARP1-203ENST00000366794 CARMIL2Q6F5E8 1435 aa18.97■□□□□ 0.63
PARP1-203ENST00000366794 BIVM-ERCC5R4GMW8 1640 aa18.96■□□□□ 0.63
PARP1-203ENST00000366794 NUTM2DQ5VT03 806 aaPredicted RBP18.96■□□□□ 0.63
PARP1-203ENST00000366794 STAG3Q9UJ98 1225 aa18.96■□□□□ 0.63
PARP1-203ENST00000366794 CDK13Q14004 1512 aaKnown RBP18.96■□□□□ 0.63
PARP1-203ENST00000366794 UACAQ9BZF9 1416 aa18.95■□□□□ 0.62
PARP1-203ENST00000366794 C11orf95C9JLR9 678 aaPredicted RBP18.95■□□□□ 0.62
PARP1-203ENST00000366794 ANP32AP39687 249 aaKnown RBP18.94■□□□□ 0.62
PARP1-203ENST00000366794 DNMBPQ6XZF7 1577 aa18.94■□□□□ 0.62
PARP1-203ENST00000366794 PRG4Q92954 1404 aaPredicted RBP18.94■□□□□ 0.62
PARP1-203ENST00000366794 ABCA10Q8WWZ4 1543 aa18.94■□□□□ 0.62
PARP1-203ENST00000366794 ANKRD30AQ9BXX3 1397 aa18.93■□□□□ 0.62
PARP1-203ENST00000366794 GGT6Q6P531 493 aa18.93■□□□□ 0.62
PARP1-203ENST00000366794 ZNF608Q9ULD9 1512 aaPredicted RBP18.93■□□□□ 0.62
PARP1-203ENST00000366794 PRDM2Q13029 1718 aa18.93■□□□□ 0.62
PARP1-203ENST00000366794 KNSTRNQ9Y448 316 aa18.91■□□□□ 0.62
PARP1-203ENST00000366794 FYCO1Q9BQS8 1478 aa18.91■□□□□ 0.62
PARP1-203ENST00000366794 PPP4R2Q9NY27 417 aa18.91■□□□□ 0.62
PARP1-203ENST00000366794 KIF7Q2M1P5 1343 aa18.9■□□□□ 0.62
PARP1-203ENST00000366794 ROCK2O75116 1388 aaKnown RBP18.9■□□□□ 0.62
PARP1-203ENST00000366794 PTPRKQ15262 1439 aa18.9■□□□□ 0.62
PARP1-203ENST00000366794 PLEKHG5O94827 1062 aa18.89■□□□□ 0.61
PARP1-203ENST00000366794 SLC24A1O60721 1099 aa18.88■□□□□ 0.61
PARP1-203ENST00000366794 NAIPQ13075 1403 aa18.88■□□□□ 0.61
PARP1-203ENST00000366794 PTPRGP23470 1445 aa18.87■□□□□ 0.61
PARP1-203ENST00000366794 KIF3BO15066 747 aa18.86■□□□□ 0.61
PARP1-203ENST00000366794 GRIN2BQ13224 1484 aa18.86■□□□□ 0.61
PARP1-203ENST00000366794 ANP32EQ9BTT0 268 aa18.84■□□□□ 0.61
PARP1-203ENST00000366794 USP47Q96K76 1375 aa18.84■□□□□ 0.61
PARP1-203ENST00000366794 SNAPC4Q5SXM2 1469 aa18.83■□□□□ 0.61
PARP1-203ENST00000366794 PPM1GO15355 546 aaPredicted RBP18.83■□□□□ 0.6
PARP1-203ENST00000366794 MLECQ14165 292 aa18.82■□□□□ 0.6
PARP1-203ENST00000366794 HFM1A2PYH4 1435 aa18.81■□□□□ 0.6
PARP1-203ENST00000366794 NBPF1Q3BBV0 1214 aa18.81■□□□□ 0.6
PARP1-203ENST00000366794 CCDC7Q96M83 1385 aa18.8■□□□□ 0.6
PARP1-203ENST00000366794 PLIN1O60240 522 aa18.8■□□□□ 0.6
PARP1-203ENST00000366794 TMF1P82094 1093 aa18.79■□□□□ 0.6
PARP1-203ENST00000366794 STK26Q9P289 416 aa18.79■□□□□ 0.6
PARP1-203ENST00000366794 EFCAB2Q5VUJ9 269 aa18.79■□□□□ 0.6
PARP1-203ENST00000366794 AFAP1Q8N556 730 aa18.79■□□□□ 0.6
PARP1-203ENST00000366794 RGS3P49796 1198 aa18.79■□□□□ 0.6
PARP1-203ENST00000366794 MAPKBP1O60336 1514 aa18.79■□□□□ 0.6
PARP1-203ENST00000366794 PLB1Q6P1J6 1458 aa18.78■□□□□ 0.6
PARP1-203ENST00000366794 CCDC146Q8IYE0 955 aa18.78■□□□□ 0.6
PARP1-203ENST00000366794 MRC2Q9UBG0 1479 aa18.78■□□□□ 0.6
PARP1-203ENST00000366794 ZBTB47Q9UFB7 747 aaPredicted RBP18.77■□□□□ 0.6
PARP1-203ENST00000366794 PANK3Q9H999 370 aa18.77■□□□□ 0.59
PARP1-203ENST00000366794 FRAT1Q92837 279 aaPredicted RBP18.75■□□□□ 0.59
PARP1-203ENST00000366794 EPRSP07814 1512 aaKnown RBP18.75■□□□□ 0.59
PARP1-203ENST00000366794 KIF15Q9NS87 1388 aa18.74■□□□□ 0.59
PARP1-203ENST00000366794 LAS1LQ9Y4W2 734 aaKnown RBP18.74■□□□□ 0.59
PARP1-203ENST00000366794 ANKRD50Q9ULJ7 1429 aa18.73■□□□□ 0.59
PARP1-203ENST00000366794 EFCAB5A4FU69 1503 aa18.73■□□□□ 0.59
PARP1-203ENST00000366794 SPAG9O60271 1321 aaKnown RBP18.73■□□□□ 0.59
PARP1-203ENST00000366794 ESF1Q9H501 851 aaKnown RBP18.73■□□□□ 0.59
PARP1-203ENST00000366794 ARXQ96QS3 562 aa18.72■□□□□ 0.59
PARP1-203ENST00000366794 TRAK1Q9UPV9 953 aa18.69■□□□□ 0.58
PARP1-203ENST00000366794 NUDCQ9Y266 331 aa18.69■□□□□ 0.58
PARP1-203ENST00000366794 RCAN3Q9UKA8 241 aa18.69■□□□□ 0.58
PARP1-203ENST00000366794 KTN1Q86UP2 1357 aaKnown RBP18.68■□□□□ 0.58
PARP1-203ENST00000366794 LAMC3Q9Y6N6 1575 aa18.68■□□□□ 0.58
PARP1-203ENST00000366794 CCDC144AA2RUR9 1427 aa18.67■□□□□ 0.58
PARP1-203ENST00000366794 U2SURPO15042 1029 aaKnown RBP18.66■□□□□ 0.58
PARP1-203ENST00000366794 CDCA7LQ96GN5 454 aa18.66■□□□□ 0.58
PARP1-203ENST00000366794 EXOC6Q8TAG9 804 aa18.65■□□□□ 0.58
PARP1-203ENST00000366794 DAPK1P53355 1430 aa18.65■□□□□ 0.58
PARP1-203ENST00000366794 SOX12O15370 315 aa18.65■□□□□ 0.58
PARP1-203ENST00000366794 RRP7AQ9Y3A4 280 aaKnown RBP18.65■□□□□ 0.58
PARP1-203ENST00000366794 CNTLNQ9NXG0 1405 aa18.64■□□□□ 0.57
PARP1-203ENST00000366794 NEFMP07197 916 aa18.64■□□□□ 0.57
PARP1-203ENST00000366794 EHBP1L1Q8N3D4 1523 aa18.64■□□□□ 0.57
PARP1-203ENST00000366794 IFT140Q96RY7 1462 aa18.63■□□□□ 0.57
PARP1-203ENST00000366794 NLRP13Q86W25 1043 aa18.63■□□□□ 0.57
PARP1-203ENST00000366794 IQGAP2Q13576 1575 aa18.62■□□□□ 0.57
PARP1-203ENST00000366794 THOC2Q8NI27 1593 aaKnown RBP18.61■□□□□ 0.57
PARP1-203ENST00000366794 ABCC5O15440 1437 aa18.61■□□□□ 0.57
PARP1-203ENST00000366794 ZBED9Q6R2W3 1325 aa18.61■□□□□ 0.57
PARP1-203ENST00000366794 CYB5RLQ6IPT4 315 aa18.61■□□□□ 0.57
PARP1-203ENST00000366794 POGKQ9P215 609 aa18.6■□□□□ 0.57
PARP1-203ENST00000366794 SRPK2P78362 688 aaKnown RBP18.6■□□□□ 0.57
PARP1-203ENST00000366794 ARHGEF11O15085 1522 aa18.6■□□□□ 0.57
PARP1-203ENST00000366794 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.6■□□□□ 0.57
PARP1-203ENST00000366794 PTPN23Q9H3S7 1636 aa18.6■□□□□ 0.57
PARP1-203ENST00000366794 TROQ12816 1431 aaPredicted RBP18.59■□□□□ 0.57
PARP1-203ENST00000366794 RALBP1Q15311 655 aa18.59■□□□□ 0.57
PARP1-203ENST00000366794 CDCA8Q53HL2 280 aa18.59■□□□□ 0.57
PARP1-203ENST00000366794 KIAA0586Q9BVV6 1533 aa18.59■□□□□ 0.57
PARP1-203ENST00000366794 SUPT6HQ7KZ85 1726 aaKnown RBP18.59■□□□□ 0.57
PARP1-203ENST00000366794 MORC1Q86VD1 984 aa18.58■□□□□ 0.57
PARP1-203ENST00000366794 AKNAQ7Z591 1439 aa18.58■□□□□ 0.57
PARP1-203ENST00000366794 ARID4BQ4LE39 1312 aaPredicted RBP18.58■□□□□ 0.56
PARP1-203ENST00000366794 ANKRD30BQ9BXX2 1392 aa18.57■□□□□ 0.56
PARP1-203ENST00000366794 MYBBP1AQ9BQG0 1328 aaKnown RBP18.57■□□□□ 0.56
PARP1-203ENST00000366794 TMEM132EQ6IEE7 984 aa18.57■□□□□ 0.56
PARP1-203ENST00000366794 BCL2L13Q9BXK5 485 aa18.57■□□□□ 0.56
PARP1-203ENST00000366794 CLUAP1Q96AJ1 413 aa18.56■□□□□ 0.56
PARP1-203ENST00000366794 SKAP1Q86WV1 359 aa18.55■□□□□ 0.56
PARP1-203ENST00000366794 CUL7Q14999 1698 aa18.55■□□□□ 0.56
PARP1-203ENST00000366794 GRIN2AQ12879 1464 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms