RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 TCERG1O14776 1098 aaKnown RBP15.39■□□□□ 0.05
CDC42BPA-203ENST00000366766 NRDCO43847 1150 aa15.39■□□□□ 0.05
CDC42BPA-203ENST00000366766 HSPA5P11021 654 aaKnown RBP15.39■□□□□ 0.05
CDC42BPA-203ENST00000366766 PKD2Q13563 968 aa15.38■□□□□ 0.05
CDC42BPA-203ENST00000366766 GOLGA6L6A8MZA4 724 aa15.38■□□□□ 0.05
CDC42BPA-203ENST00000366766 KANK4Q5T7N3 995 aaPredicted RBP15.37■□□□□ 0.05
CDC42BPA-203ENST00000366766 HSCBQ8IWL3 235 aa15.37■□□□□ 0.05
CDC42BPA-203ENST00000366766 EFCAB2Q5VUJ9 269 aa15.36■□□□□ 0.05
CDC42BPA-203ENST00000366766 MCCP23508 829 aa15.36■□□□□ 0.05
CDC42BPA-203ENST00000366766 KIF15Q9NS87 1388 aa15.35■□□□□ 0.05
CDC42BPA-203ENST00000366766 PTMAP06454 111 aaKnown RBP15.35■□□□□ 0.05
CDC42BPA-203ENST00000366766 NLRP13Q86W25 1043 aa15.35■□□□□ 0.05
CDC42BPA-203ENST00000366766 NGEFQ8N5V2 710 aa15.34■□□□□ 0.05
CDC42BPA-203ENST00000366766 MORC1Q86VD1 984 aa15.34■□□□□ 0.05
CDC42BPA-203ENST00000366766 C14orf37Q86TY3 774 aa15.33■□□□□ 0.05
CDC42BPA-203ENST00000366766 FANCD2Q9BXW9 1451 aa15.33■□□□□ 0.04
CDC42BPA-203ENST00000366766 CC2D1BQ5T0F9 858 aaKnown RBP15.33■□□□□ 0.04
CDC42BPA-203ENST00000366766 FHOD3Q2V2M9 1422 aa15.33■□□□□ 0.04
CDC42BPA-203ENST00000366766 HSP90AB1P08238 724 aaKnown RBP15.33■□□□□ 0.04
CDC42BPA-203ENST00000366766 RCAN3Q9UKA8 241 aa15.33■□□□□ 0.04
CDC42BPA-203ENST00000366766 EFCAB5A4FU69 1503 aa15.32■□□□□ 0.04
CDC42BPA-203ENST00000366766 RGS3P49796 1198 aa15.32■□□□□ 0.04
CDC42BPA-203ENST00000366766 FRAT1Q92837 279 aaPredicted RBP15.31■□□□□ 0.04
CDC42BPA-203ENST00000366766 PRDM2Q13029 1718 aa15.31■□□□□ 0.04
CDC42BPA-203ENST00000366766 DHX57Q6P158 1386 aaKnown RBP15.31■□□□□ 0.04
CDC42BPA-203ENST00000366766 HDAC5Q9UQL6 1122 aa15.31■□□□□ 0.04
CDC42BPA-203ENST00000366766 HDGFL2Q7Z4V5 671 aaPredicted RBP15.3■□□□□ 0.04
CDC42BPA-203ENST00000366766 ARXQ96QS3 562 aa15.3■□□□□ 0.04
CDC42BPA-203ENST00000366766 B4GALNT3Q6L9W6 998 aa15.29■□□□□ 0.04
CDC42BPA-203ENST00000366766 CCDC144AA2RUR9 1427 aa15.29■□□□□ 0.04
CDC42BPA-203ENST00000366766 RWDD1Q9H446 243 aaPredicted RBP15.29■□□□□ 0.04
CDC42BPA-203ENST00000366766 STAC3Q96MF2 364 aa15.29■□□□□ 0.04
CDC42BPA-203ENST00000366766 FYCO1Q9BQS8 1478 aa15.28■□□□□ 0.04
CDC42BPA-203ENST00000366766 RBM19Q9Y4C8 960 aaKnown RBP15.27■□□□□ 0.04
CDC42BPA-203ENST00000366766 MYOM3Q5VTT5 1437 aa15.27■□□□□ 0.04
CDC42BPA-203ENST00000366766 PMFBP1Q8TBY8 1022 aa15.27■□□□□ 0.04
CDC42BPA-203ENST00000366766 TDRD9Q8NDG6 1382 aaKnown RBP15.27■□□□□ 0.04
CDC42BPA-203ENST00000366766 U2SURPO15042 1029 aaKnown RBP15.27■□□□□ 0.04
CDC42BPA-203ENST00000366766 CHAF1AQ13111 956 aaPredicted RBP15.27■□□□□ 0.03
CDC42BPA-203ENST00000366766 NEUROD2Q15784 382 aa15.26■□□□□ 0.03
CDC42BPA-203ENST00000366766 GBP4Q96PP9 640 aa15.26■□□□□ 0.03
CDC42BPA-203ENST00000366766 ZBED9Q6R2W3 1325 aa15.26■□□□□ 0.03
CDC42BPA-203ENST00000366766 TOP2BQ02880 1626 aa15.25■□□□□ 0.03
CDC42BPA-203ENST00000366766 SRPK2P78362 688 aaKnown RBP15.25■□□□□ 0.03
CDC42BPA-203ENST00000366766 TERF2IPQ9NYB0 399 aa15.25■□□□□ 0.03
CDC42BPA-203ENST00000366766 USP35Q9P2H5 1018 aa15.25■□□□□ 0.03
CDC42BPA-203ENST00000366766 GAPVD1Q14C86 1478 aa15.24■□□□□ 0.03
CDC42BPA-203ENST00000366766 DNTTIP2Q5QJE6 756 aaKnown RBP15.23■□□□□ 0.03
CDC42BPA-203ENST00000366766 FGD5Q6ZNL6 1462 aa15.23■□□□□ 0.03
CDC42BPA-203ENST00000366766 MYBBP1AQ9BQG0 1328 aaKnown RBP15.23■□□□□ 0.03
CDC42BPA-203ENST00000366766 LMOD3Q0VAK6 560 aa15.23■□□□□ 0.03
CDC42BPA-203ENST00000366766 HMGXB3Q12766 1538 aa15.23■□□□□ 0.03
CDC42BPA-203ENST00000366766 SUPT6HQ7KZ85 1726 aaKnown RBP15.23■□□□□ 0.03
CDC42BPA-203ENST00000366766 LAS1LQ9Y4W2 734 aaKnown RBP15.22■□□□□ 0.03
CDC42BPA-203ENST00000366766 NCAPD3P42695 1498 aa15.22■□□□□ 0.03
CDC42BPA-203ENST00000366766 OS9Q13438 667 aaPredicted RBP15.22■□□□□ 0.03
CDC42BPA-203ENST00000366766 FGD6Q6ZV73 1430 aa15.21■□□□□ 0.03
CDC42BPA-203ENST00000366766 L3MBTL2Q969R5 705 aa15.21■□□□□ 0.03
CDC42BPA-203ENST00000366766 SYAP1Q96A49 352 aaPredicted RBP15.21■□□□□ 0.03
CDC42BPA-203ENST00000366766 CASKIN1Q8WXD9 1431 aa15.21■□□□□ 0.03
CDC42BPA-203ENST00000366766 KCNJ4P48050 445 aa15.21■□□□□ 0.02
CDC42BPA-203ENST00000366766 RTF1Q92541 710 aaKnown RBP15.2■□□□□ 0.02
CDC42BPA-203ENST00000366766 LRRC9Q6ZRR7 1453 aa15.2■□□□□ 0.02
CDC42BPA-203ENST00000366766 FGD1P98174 961 aa15.2■□□□□ 0.02
CDC42BPA-203ENST00000366766 PLPPR3Q6T4P5 718 aa15.2■□□□□ 0.02
CDC42BPA-203ENST00000366766 GOLGA2Q08379 1002 aa15.2■□□□□ 0.02
CDC42BPA-203ENST00000366766 GOLGA6L4A6NEF3 574 aa15.19■□□□□ 0.02
CDC42BPA-203ENST00000366766 SPAG9O60271 1321 aaKnown RBP15.18■□□□□ 0.02
CDC42BPA-203ENST00000366766 AAMPQ13685 434 aa15.18■□□□□ 0.02
CDC42BPA-203ENST00000366766 HTATSF1O43719 755 aaKnown RBP15.18■□□□□ 0.02
CDC42BPA-203ENST00000366766 MIA2Q96PC5 1412 aa15.18■□□□□ 0.02
CDC42BPA-203ENST00000366766 HMMRO75330 724 aa15.18■□□□□ 0.02
CDC42BPA-203ENST00000366766 MSNP26038 577 aaKnown RBP15.18■□□□□ 0.02
CDC42BPA-203ENST00000366766 USP47Q96K76 1375 aa15.17■□□□□ 0.02
CDC42BPA-203ENST00000366766 KIAA1211Q6ZU35 1233 aa15.17■□□□□ 0.02
CDC42BPA-203ENST00000366766 IPO9Q96P70 1041 aaKnown RBP15.16■□□□□ 0.02
CDC42BPA-203ENST00000366766 HECW1Q76N89 1606 aa15.16■□□□□ 0.02
CDC42BPA-203ENST00000366766 EHBP1L1Q8N3D4 1523 aa15.16■□□□□ 0.02
CDC42BPA-203ENST00000366766 NAP1L5Q96NT1 182 aaPredicted RBP15.14■□□□□ 0.01
CDC42BPA-203ENST00000366766 U2AF1L5P0DN76 240 aaPredicted RBP15.14■□□□□ 0.01
CDC42BPA-203ENST00000366766 U2AF1Q01081 240 aaKnown RBP eCLIP15.14■□□□□ 0.015e-7■■■■□ 23.8
CDC42BPA-203ENST00000366766 CENPJQ9HC77 1338 aaPredicted RBP15.13■□□□□ 0.01
CDC42BPA-203ENST00000366766 GPATCH3Q96I76 525 aa15.13■□□□□ 0.01
CDC42BPA-203ENST00000366766 RUSC2Q8N2Y8 1516 aa15.13■□□□□ 0.01
CDC42BPA-203ENST00000366766 RRBP1Q9P2E9 1410 aaKnown RBP15.13■□□□□ 0.01
CDC42BPA-203ENST00000366766 CENPQQ7L2Z9 268 aaPredicted RBP15.12■□□□□ 0.01
CDC42BPA-203ENST00000366766 CUL7Q14999 1698 aa15.12■□□□□ 0.01
CDC42BPA-203ENST00000366766 CGNL1Q0VF96 1302 aa15.12■□□□□ 0.01
CDC42BPA-203ENST00000366766 ZBTB7CA1YPR0 619 aa15.12■□□□□ 0.01
CDC42BPA-203ENST00000366766 SYNJ1O43426 1573 aa15.12■□□□□ 0.01
CDC42BPA-203ENST00000366766 CSPP1Q1MSJ5 1256 aa15.12■□□□□ 0.01
CDC42BPA-203ENST00000366766 DEKP35659 375 aaKnown RBP15.11■□□□□ 0.01
CDC42BPA-203ENST00000366766 PHF14O94880 888 aa15.1■□□□□ 0.01
CDC42BPA-203ENST00000366766 IGF1RP08069 1367 aa15.1■□□□□ 0.01
CDC42BPA-203ENST00000366766 CCDC34Q96HJ3 373 aa15.1■□□□□ 0.01
CDC42BPA-203ENST00000366766 CHMP4CQ96CF2 233 aa15.1■□□□□ 0.01
CDC42BPA-203ENST00000366766 SCAPERQ9BY12 1400 aa15.09■□□□□ 0.01
CDC42BPA-203ENST00000366766 PRKRIP1Q9H875 184 aaPredicted RBP15.09■□□□□ 0.01
CDC42BPA-203ENST00000366766 CFTRP13569 1480 aa15.09■□□□□ 0.01
CDC42BPA-203ENST00000366766 FOXD1Q16676 465 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms