RNA–Protein interactions for RNA: ENST00000366746.7

MRPL55-217, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-217ENST00000366746 MLECQ14165 292 aa27.6■■■□□ 2.01
MRPL55-217ENST00000366746 ZMYM4Q5VZL5 1548 aa27.6■■■□□ 2.01
MRPL55-217ENST00000366746 LMTK3Q96Q04 1460 aa27.58■■■□□ 2.01
MRPL55-217ENST00000366746 HSPA2P54652 639 aa27.54■■■□□ 2
MRPL55-217ENST00000366746 RIMS1Q86UR5 1692 aaKnown RBP27.53■■■□□ 2
MRPL55-217ENST00000366746 HECW1Q76N89 1606 aa27.53■■■□□ 2
MRPL55-217ENST00000366746 ARHGAP35Q9NRY4 1499 aa27.53■■■□□ 2
MRPL55-217ENST00000366746 CHIC1Q5VXU3 224 aa27.52■■■□□ 2
MRPL55-217ENST00000366746 ATP10AO60312 1499 aa27.48■■□□□ 1.99
MRPL55-217ENST00000366746 TROQ12816 1431 aaPredicted RBP27.46■■□□□ 1.99
MRPL55-217ENST00000366746 CLIP1P30622 1438 aa27.45■■□□□ 1.98
MRPL55-217ENST00000366746 MYT1LQ9UL68 1186 aa27.45■■□□□ 1.98
MRPL55-217ENST00000366746 C9orf84Q5VXU9 1444 aa27.44■■□□□ 1.98
MRPL55-217ENST00000366746 AFAP1Q8N556 730 aa27.44■■□□□ 1.98
MRPL55-217ENST00000366746 SIGLEC1Q9BZZ2 1709 aa27.41■■□□□ 1.98
MRPL55-217ENST00000366746 ZNF518AQ6AHZ1 1483 aa27.4■■□□□ 1.98
MRPL55-217ENST00000366746 KIF14Q15058 1648 aa27.4■■□□□ 1.98
MRPL55-217ENST00000366746 ARHGAP5Q13017 1502 aa27.4■■□□□ 1.98
MRPL55-217ENST00000366746 MYO5CQ9NQX4 1742 aa27.38■■□□□ 1.97
MRPL55-217ENST00000366746 CEBPAP49715 358 aaPredicted RBP27.37■■□□□ 1.97
MRPL55-217ENST00000366746 ARHGEF12Q9NZN5 1544 aa27.36■■□□□ 1.97
MRPL55-217ENST00000366746 FER1L4A9Z1Z3 1794 aa27.32■■□□□ 1.96
MRPL55-217ENST00000366746 CERKQ8TCT0 537 aa27.3■■□□□ 1.96
MRPL55-217ENST00000366746 KDM5CP41229 1560 aa27.28■■□□□ 1.96
MRPL55-217ENST00000366746 CASKIN1Q8WXD9 1431 aa27.28■■□□□ 1.96
MRPL55-217ENST00000366746 ESF1Q9H501 851 aaKnown RBP27.27■■□□□ 1.96
MRPL55-217ENST00000366746 CCDC18Q5T9S5 1454 aa27.26■■□□□ 1.95
MRPL55-217ENST00000366746 MLH3Q9UHC1 1453 aa27.25■■□□□ 1.95
MRPL55-217ENST00000366746 DMRT2Q9Y5R5 561 aa27.24■■□□□ 1.95
MRPL55-217ENST00000366746 TRAPPC8Q9Y2L5 1435 aa27.23■■□□□ 1.95
MRPL55-217ENST00000366746 UHRF1BP1Q6BDS2 1440 aa27.2■■□□□ 1.94
MRPL55-217ENST00000366746 DIP2CQ9Y2E4 1556 aa27.2■■□□□ 1.94
MRPL55-217ENST00000366746 ZNF777Q9ULD5 760 aaPredicted RBP27.19■■□□□ 1.94
MRPL55-217ENST00000366746 LRRIQ1Q96JM4 1722 aa27.18■■□□□ 1.94
MRPL55-217ENST00000366746 REREQ9P2R6 1566 aa27.17■■□□□ 1.94
MRPL55-217ENST00000366746 CDC42BPBQ9Y5S2 1711 aa27.16■■□□□ 1.94
MRPL55-217ENST00000366746 PREX1Q8TCU6 1659 aa27.16■■□□□ 1.94
MRPL55-217ENST00000366746 ABCC1P33527 1531 aa27.16■■□□□ 1.94
MRPL55-217ENST00000366746 PREX2Q70Z35 1606 aa27.14■■□□□ 1.94
MRPL55-217ENST00000366746 AGLP35573 1532 aa27.14■■□□□ 1.94
MRPL55-217ENST00000366746 FYCO1Q9BQS8 1478 aa27.13■■□□□ 1.93
MRPL55-217ENST00000366746 ABCA6Q8N139 1617 aa27.12■■□□□ 1.93
MRPL55-217ENST00000366746 HNRNPMP52272 730 aaKnown RBP eCLIP27.09■■□□□ 1.93
MRPL55-217ENST00000366746 SPAG9O60271 1321 aaKnown RBP27.09■■□□□ 1.93
MRPL55-217ENST00000366746 CNTLNQ9NXG0 1405 aa27.07■■□□□ 1.92
MRPL55-217ENST00000366746 CFDP1Q9UEE9 299 aaPredicted RBP27.07■■□□□ 1.92
MRPL55-217ENST00000366746 ITSN2Q9NZM3 1697 aa27.05■■□□□ 1.92
MRPL55-217ENST00000366746 GPATCH8Q9UKJ3 1502 aaKnown RBP27.05■■□□□ 1.92
MRPL55-217ENST00000366746 SETD1BQ9UPS6 1966 aaKnown RBP27.04■■□□□ 1.92
MRPL55-217ENST00000366746 KIDINS220Q9ULH0 1771 aa27.02■■□□□ 1.92
MRPL55-217ENST00000366746 CCNB3Q8WWL7 1395 aa27.01■■□□□ 1.91
MRPL55-217ENST00000366746 SAMD9LQ8IVG5 1584 aa27.01■■□□□ 1.91
MRPL55-217ENST00000366746 PTPRTO14522 1441 aa27■■□□□ 1.91
MRPL55-217ENST00000366746 CDC42BPAQ5VT25 1732 aa27■■□□□ 1.91
MRPL55-217ENST00000366746 KIAA1107Q9UPP5 1409 aa26.99■■□□□ 1.91
MRPL55-217ENST00000366746 C3P01024 1663 aa26.99■■□□□ 1.91
MRPL55-217ENST00000366746 SYCP2Q9BX26 1530 aa26.99■■□□□ 1.91
MRPL55-217ENST00000366746 STRCQ7RTU9 1775 aa26.99■■□□□ 1.91
MRPL55-217ENST00000366746 ZMYM3Q14202 1370 aa26.97■■□□□ 1.91
MRPL55-217ENST00000366746 MTUS2Q5JR59 1369 aa26.97■■□□□ 1.91
MRPL55-217ENST00000366746 PLEKHH2Q8IVE3 1493 aa26.97■■□□□ 1.91
MRPL55-217ENST00000366746 NPATQ14207 1427 aa26.94■■□□□ 1.9
MRPL55-217ENST00000366746 GGT6Q6P531 493 aa26.92■■□□□ 1.9
MRPL55-217ENST00000366746 NCOA1Q15788 1441 aa26.9■■□□□ 1.9
MRPL55-217ENST00000366746 A2MP01023 1474 aa26.9■■□□□ 1.9
MRPL55-217ENST00000366746 ATP7AQ04656 1500 aa26.9■■□□□ 1.9
MRPL55-217ENST00000366746 PPP6R1Q9UPN7 881 aa26.87■■□□□ 1.89
MRPL55-217ENST00000366746 ZNF644Q9H582 1327 aaPredicted RBP26.87■■□□□ 1.89
MRPL55-217ENST00000366746 NCKAP5LQ9HCH0 1330 aa26.84■■□□□ 1.89
MRPL55-217ENST00000366746 SUPT6HQ7KZ85 1726 aaKnown RBP26.83■■□□□ 1.89
MRPL55-217ENST00000366746 MROH2AA6NES4 1674 aa26.82■■□□□ 1.88
MRPL55-217ENST00000366746 CAMSAP1Q5T5Y3 1602 aa26.82■■□□□ 1.88
MRPL55-217ENST00000366746 INO80Q9ULG1 1556 aaPredicted RBP26.81■■□□□ 1.88
MRPL55-217ENST00000366746 DISP3Q9P2K9 1392 aa26.81■■□□□ 1.88
MRPL55-217ENST00000366746 PLXNC1O60486 1568 aa26.8■■□□□ 1.88
MRPL55-217ENST00000366746 PKD2Q13563 968 aa26.8■■□□□ 1.88
MRPL55-217ENST00000366746 PTPRKQ15262 1439 aa26.79■■□□□ 1.88
MRPL55-217ENST00000366746 LTBP4Q8N2S1 1624 aa26.79■■□□□ 1.88
MRPL55-217ENST00000366746 MBD5Q9P267 1494 aa26.77■■□□□ 1.88
MRPL55-217ENST00000366746 RTEL1-TNFRSF6BF6WH68 1400 aa26.75■■□□□ 1.87
MRPL55-217ENST00000366746 CEP162Q5TB80 1403 aa26.75■■□□□ 1.87
MRPL55-217ENST00000366746 EHBP1L1Q8N3D4 1523 aa26.75■■□□□ 1.87
MRPL55-217ENST00000366746 IQSEC2Q5JU85 1478 aa26.74■■□□□ 1.87
MRPL55-217ENST00000366746 DHX29Q7Z478 1369 aaKnown RBP26.74■■□□□ 1.87
MRPL55-217ENST00000366746 CLTCQ00610 1675 aaKnown RBP26.74■■□□□ 1.87
MRPL55-217ENST00000366746 ZNF335Q9H4Z2 1342 aaPredicted RBP26.73■■□□□ 1.87
MRPL55-217ENST00000366746 TIAM1Q13009 1591 aa26.73■■□□□ 1.87
MRPL55-217ENST00000366746 RSPH4AQ5TD94 716 aa26.72■■□□□ 1.87
MRPL55-217ENST00000366746 PLA2R1Q13018 1463 aa26.72■■□□□ 1.87
MRPL55-217ENST00000366746 KIF3BO15066 747 aa26.71■■□□□ 1.87
MRPL55-217ENST00000366746 ILDR2Q71H61 639 aa26.68■■□□□ 1.86
MRPL55-217ENST00000366746 ADGBQ8N7X0 1667 aa26.68■■□□□ 1.86
MRPL55-217ENST00000366746 CEP170BQ9Y4F5 1589 aaPredicted RBP26.67■■□□□ 1.86
MRPL55-217ENST00000366746 UBAP1LF5GYI3 381 aa26.67■■□□□ 1.86
MRPL55-217ENST00000366746 MYO3AQ8NEV4 1616 aa26.67■■□□□ 1.86
MRPL55-217ENST00000366746 TCOF1Q13428 1488 aaKnown RBP26.66■■□□□ 1.86
MRPL55-217ENST00000366746 TSPY4P0CV99 314 aa26.64■■□□□ 1.86
MRPL55-217ENST00000366746 TSPY10P0CW01 314 aa26.64■■□□□ 1.86
MRPL55-217ENST00000366746 FBXO31Q5XUX0 539 aaPredicted RBP26.64■■□□□ 1.86
MRPL55-217ENST00000366746 WASHC2CQ9Y4E1 1318 aa26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms