RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 UACAQ9BZF9 1416 aa15.07■□□□□ 0
SMC3-201ENST00000361804 ABCC10Q5T3U5 1492 aa15.07■□□□□ 0
SMC3-201ENST00000361804 PPP1R15AO75807 674 aaPredicted RBP15.07■□□□□ 0
SMC3-201ENST00000361804 AKNAQ7Z591 1439 aa15.06■□□□□ 0
SMC3-201ENST00000361804 ABCC5O15440 1437 aa15.06■□□□□ 0
SMC3-201ENST00000361804 ADGBQ8N7X0 1667 aa15.05■□□□□ -0
SMC3-201ENST00000361804 ZNF644Q9H582 1327 aaPredicted RBP15.05■□□□□ -0
SMC3-201ENST00000361804 MIA2Q96PC5 1412 aa15.04■□□□□ -0
SMC3-201ENST00000361804 GPATCH8Q9UKJ3 1502 aaKnown RBP15.03■□□□□ -0
SMC3-201ENST00000361804 DAPK1P53355 1430 aa15.03■□□□□ -0
SMC3-201ENST00000361804 MYT1Q01538 1121 aa15.01□□□□□ -0.01
SMC3-201ENST00000361804 ARID3CA6NKF2 412 aa15.01□□□□□ -0.01
SMC3-201ENST00000361804 ITSN2Q9NZM3 1697 aa15.01□□□□□ -0.01
SMC3-201ENST00000361804 ATP10BO94823 1461 aa15□□□□□ -0.01
SMC3-201ENST00000361804 CAMSAP2Q08AD1 1489 aa14.99□□□□□ -0.01
SMC3-201ENST00000361804 CHIC2Q9UKJ5 165 aa14.98□□□□□ -0.01
SMC3-201ENST00000361804 PZPP20742 1482 aa14.98□□□□□ -0.01
SMC3-201ENST00000361804 IRX6P78412 446 aaPredicted RBP14.98□□□□□ -0.01
SMC3-201ENST00000361804 ANP32CO43423 234 aa14.96□□□□□ -0.01
SMC3-201ENST00000361804 CLASP1Q7Z460 1538 aa14.96□□□□□ -0.01
SMC3-201ENST00000361804 TROQ12816 1431 aaPredicted RBP14.96□□□□□ -0.01
SMC3-201ENST00000361804 TEX14Q8IWB6 1497 aa14.95□□□□□ -0.02
SMC3-201ENST00000361804 TTC37Q6PGP7 1564 aa14.95□□□□□ -0.02
SMC3-201ENST00000361804 SAMD9LQ8IVG5 1584 aa14.95□□□□□ -0.02
SMC3-201ENST00000361804 TONSLQ96HA7 1378 aa14.95□□□□□ -0.02
SMC3-201ENST00000361804 RRP7BPQ9NSQ0 103 aa14.95□□□□□ -0.02
SMC3-201ENST00000361804 ADGRL2O95490 1459 aa14.94□□□□□ -0.02
SMC3-201ENST00000361804 PREX2Q70Z35 1606 aa14.93□□□□□ -0.02
SMC3-201ENST00000361804 POLR1AO95602 1720 aaPredicted RBP14.92□□□□□ -0.02
SMC3-201ENST00000361804 ROCK1Q13464 1354 aa14.92□□□□□ -0.02
SMC3-201ENST00000361804 FOXD1Q16676 465 aa14.91□□□□□ -0.02
SMC3-201ENST00000361804 MBD5Q9P267 1494 aa14.9□□□□□ -0.02
SMC3-201ENST00000361804 JPH4Q96JJ6 628 aa14.9□□□□□ -0.02
SMC3-201ENST00000361804 NCOA1Q15788 1441 aa14.89□□□□□ -0.03
SMC3-201ENST00000361804 NEFLP07196 543 aa14.88□□□□□ -0.03
SMC3-201ENST00000361804 CNGB1Q14028 1251 aaPredicted RBP14.87□□□□□ -0.03
SMC3-201ENST00000361804 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.86□□□□□ -0.031e-7■■■□□ 15.5
SMC3-201ENST00000361804 HNRNPUQ00839 825 aaKnown RBP eCLIP14.86□□□□□ -0.03
SMC3-201ENST00000361804 ANKRD30BQ9BXX2 1392 aa14.86□□□□□ -0.03
SMC3-201ENST00000361804 CCDC184Q52MB2 194 aa14.86□□□□□ -0.03
SMC3-201ENST00000361804 ANP32EQ9BTT0 268 aa14.86□□□□□ -0.03
SMC3-201ENST00000361804 BCORL1Q5H9F3 1711 aa14.86□□□□□ -0.03
SMC3-201ENST00000361804 RBM19Q9Y4C8 960 aaKnown RBP14.85□□□□□ -0.03
SMC3-201ENST00000361804 RPRD2Q5VT52 1461 aaKnown RBP14.84□□□□□ -0.03
SMC3-201ENST00000361804 ARHGEF5Q12774 1597 aa14.84□□□□□ -0.03
SMC3-201ENST00000361804 ZCCHC11Q5TAX3 1644 aaKnown RBP14.84□□□□□ -0.03
SMC3-201ENST00000361804 KDM5DQ9BY66 1539 aa14.83□□□□□ -0.03
SMC3-201ENST00000361804 ARHGEF12Q9NZN5 1544 aa14.83□□□□□ -0.03
SMC3-201ENST00000361804 CCER2I3L3R5 266 aa14.83□□□□□ -0.03
SMC3-201ENST00000361804 CHMP7Q8WUX9 453 aaPredicted RBP14.83□□□□□ -0.03
SMC3-201ENST00000361804 SENP3-EIF4A1A0A087X0R7 540 aa14.83□□□□□ -0.04
SMC3-201ENST00000361804 SPATA31E1Q6ZUB1 1445 aa14.82□□□□□ -0.04
SMC3-201ENST00000361804 ABCC2Q92887 1545 aa14.82□□□□□ -0.04
SMC3-201ENST00000361804 HSPA5P11021 654 aaKnown RBP14.82□□□□□ -0.04
SMC3-201ENST00000361804 TIMELESSQ9UNS1 1208 aa14.82□□□□□ -0.04
SMC3-201ENST00000361804 WASHC2AQ641Q2 1341 aa14.81□□□□□ -0.04
SMC3-201ENST00000361804 SHANK2Q9UPX8 1470 aa14.8□□□□□ -0.04
SMC3-201ENST00000361804 C11orf95C9JLR9 678 aaPredicted RBP14.79□□□□□ -0.04
SMC3-201ENST00000361804 PTPRGP23470 1445 aa14.79□□□□□ -0.04
SMC3-201ENST00000361804 MYO5CQ9NQX4 1742 aa14.78□□□□□ -0.04
SMC3-201ENST00000361804 MPHOSPH9Q99550 1183 aa14.77□□□□□ -0.04
SMC3-201ENST00000361804 MAST1Q9Y2H9 1570 aa14.77□□□□□ -0.05
SMC3-201ENST00000361804 NBPF8Q3BBV2 869 aa14.77□□□□□ -0.05
SMC3-201ENST00000361804 UNC13BO14795 1591 aa14.76□□□□□ -0.05
SMC3-201ENST00000361804 CARMIL2Q6F5E8 1435 aa14.75□□□□□ -0.05
SMC3-201ENST00000361804 FAM9BQ8IZU0 186 aa14.75□□□□□ -0.05
SMC3-201ENST00000361804 FBLN2P98095 1184 aa14.74□□□□□ -0.05
SMC3-201ENST00000361804 SYCP2Q9BX26 1530 aa14.74□□□□□ -0.05
SMC3-201ENST00000361804 L3MBTL2Q969R5 705 aa14.74□□□□□ -0.05
SMC3-201ENST00000361804 MSH5O43196 834 aa14.73□□□□□ -0.05
SMC3-201ENST00000361804 KDM5CP41229 1560 aa14.73□□□□□ -0.05
SMC3-201ENST00000361804 PLXNC1O60486 1568 aa14.72□□□□□ -0.05
SMC3-201ENST00000361804 PLA2R1Q13018 1463 aa14.71□□□□□ -0.05
SMC3-201ENST00000361804 MAGI2Q86UL8 1455 aa14.7□□□□□ -0.06
SMC3-201ENST00000361804 C9orf84Q5VXU9 1444 aa14.7□□□□□ -0.06
SMC3-201ENST00000361804 E9PCH4 1651 aa14.69□□□□□ -0.06
SMC3-201ENST00000361804 POLR3GLQ9BT43 218 aa14.69□□□□□ -0.06
SMC3-201ENST00000361804 EIF4G2P78344 907 aaKnown RBP eCLIP14.68□□□□□ -0.06
SMC3-201ENST00000361804 IQGAP3Q86VI3 1631 aa14.67□□□□□ -0.06
SMC3-201ENST00000361804 UHRF1BP1LA0JNW5 1464 aa14.67□□□□□ -0.06
SMC3-201ENST00000361804 ABCC1P33527 1531 aa14.66□□□□□ -0.06
SMC3-201ENST00000361804 ABCA9Q8IUA7 1624 aa14.65□□□□□ -0.06
SMC3-201ENST00000361804 ZNF326Q5BKZ1 582 aaKnown RBP14.65□□□□□ -0.06
SMC3-201ENST00000361804 ANKRD50Q9ULJ7 1429 aa14.65□□□□□ -0.06
SMC3-201ENST00000361804 TRPM1Q7Z4N2 1603 aa14.65□□□□□ -0.06
SMC3-201ENST00000361804 B4GALNT3Q6L9W6 998 aa14.64□□□□□ -0.07
SMC3-201ENST00000361804 MRS2Q9HD23 443 aa14.64□□□□□ -0.07
SMC3-201ENST00000361804 FAM135AQ9P2D6 1515 aa14.64□□□□□ -0.07
SMC3-201ENST00000361804 KIAA1107Q9UPP5 1409 aa14.64□□□□□ -0.07
SMC3-201ENST00000361804 DEPDC5O75140 1603 aa14.64□□□□□ -0.07
SMC3-201ENST00000361804 CFDP1Q9UEE9 299 aaPredicted RBP14.63□□□□□ -0.07
SMC3-201ENST00000361804 MROH1Q8NDA8 1641 aa14.63□□□□□ -0.07
SMC3-201ENST00000361804 PRKRIP1Q9H875 184 aaPredicted RBP14.62□□□□□ -0.07
SMC3-201ENST00000361804 CCDC141Q6ZP82 1450 aa14.61□□□□□ -0.07
SMC3-201ENST00000361804 UHRF1BP1Q6BDS2 1440 aa14.6□□□□□ -0.07
SMC3-201ENST00000361804 HNRNPMP52272 730 aaKnown RBP eCLIP14.6□□□□□ -0.07
SMC3-201ENST00000361804 SLC4A1APQ9BWU0 796 aaKnown RBP14.6□□□□□ -0.07
SMC3-201ENST00000361804 CCDC7Q96M83 1385 aa14.59□□□□□ -0.07
SMC3-201ENST00000361804 CNTLNQ9NXG0 1405 aa14.59□□□□□ -0.07
SMC3-201ENST00000361804 INO80Q9ULG1 1556 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms