RNA–Protein interactions for RNA: ENST00000361796.9

CTNND1-204, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-204ENST00000361796 KLHL34Q8N239 644 aa10.3□□□□□ -0.76
CTNND1-204ENST00000361796 RBM19Q9Y4C8 960 aaKnown RBP10.3□□□□□ -0.76
CTNND1-204ENST00000361796 MSNP26038 577 aaKnown RBP10.29□□□□□ -0.76
CTNND1-204ENST00000361796 SLKQ9H2G2 1235 aaPredicted RBP10.29□□□□□ -0.76
CTNND1-204ENST00000361796 KIF27Q86VH2 1401 aa10.28□□□□□ -0.76
CTNND1-204ENST00000361796 CCNB3Q8WWL7 1395 aa10.28□□□□□ -0.76
CTNND1-204ENST00000361796 ZNF330Q9Y3S2 320 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-204ENST00000361796 CEP164Q9UPV0 1460 aa10.28□□□□□ -0.76
CTNND1-204ENST00000361796 TNIKQ9UKE5 1360 aa10.28□□□□□ -0.76
CTNND1-204ENST00000361796 BAZ1BQ9UIG0 1483 aaKnown RBP10.27□□□□□ -0.77
CTNND1-204ENST00000361796 ITPRIPQ8IWB1 547 aa10.26□□□□□ -0.77
CTNND1-204ENST00000361796 FOXD4L1Q9NU39 408 aa10.26□□□□□ -0.77
CTNND1-204ENST00000361796 PAK3O75914 559 aaPredicted RBP10.25□□□□□ -0.77
CTNND1-204ENST00000361796 EEA1Q15075 1411 aa10.25□□□□□ -0.77
CTNND1-204ENST00000361796 MS4A1P11836 297 aa10.25□□□□□ -0.77
CTNND1-204ENST00000361796 MCCP23508 829 aa10.25□□□□□ -0.77
CTNND1-204ENST00000361796 GNL2Q13823 731 aaKnown RBP10.25□□□□□ -0.77
CTNND1-204ENST00000361796 CHAF1AQ13111 956 aaPredicted RBP10.25□□□□□ -0.77
CTNND1-204ENST00000361796 ERCC6Q03468 1493 aa10.24□□□□□ -0.77
CTNND1-204ENST00000361796 NOL8Q76FK4 1167 aaKnown RBP10.24□□□□□ -0.77
CTNND1-204ENST00000361796 RTF1Q92541 710 aaKnown RBP10.24□□□□□ -0.77
CTNND1-204ENST00000361796 GGT6Q6P531 493 aa10.24□□□□□ -0.77
CTNND1-204ENST00000361796 NUTM2DQ5VT03 806 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-204ENST00000361796 CCDC146Q8IYE0 955 aa10.23□□□□□ -0.77
CTNND1-204ENST00000361796 PNNQ9H307 717 aaKnown RBP10.23□□□□□ -0.77
CTNND1-204ENST00000361796 CHMP4BQ9H444 224 aaKnown RBP10.23□□□□□ -0.77
CTNND1-204ENST00000361796 MFAP1P55081 439 aaKnown RBP10.23□□□□□ -0.77
CTNND1-204ENST00000361796 TMX4Q9H1E5 349 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-204ENST00000361796 SOGA1O94964 1423 aa10.22□□□□□ -0.77
CTNND1-204ENST00000361796 PKD2Q13563 968 aa10.22□□□□□ -0.77
CTNND1-204ENST00000361796 L1TD1Q5T7N2 865 aaKnown RBP10.22□□□□□ -0.77
CTNND1-204ENST00000361796 U2AF1L5P0DN76 240 aaPredicted RBP10.21□□□□□ -0.77
CTNND1-204ENST00000361796 U2AF1Q01081 240 aaKnown RBP eCLIP10.21□□□□□ -0.772e-10■■□□□ 12.3
CTNND1-204ENST00000361796 KTN1Q86UP2 1357 aaKnown RBP10.21□□□□□ -0.77
CTNND1-204ENST00000361796 PDE4CQ08493 712 aa10.21□□□□□ -0.77
CTNND1-204ENST00000361796 KANK1Q14678 1352 aa10.21□□□□□ -0.77
CTNND1-204ENST00000361796 NRDCO43847 1150 aa10.21□□□□□ -0.77
CTNND1-204ENST00000361796 KANK4Q5T7N3 995 aaPredicted RBP10.21□□□□□ -0.77
CTNND1-204ENST00000361796 RCAN3Q9UKA8 241 aa10.21□□□□□ -0.78
CTNND1-204ENST00000361796 ROCK2O75116 1388 aaKnown RBP10.2□□□□□ -0.78
CTNND1-204ENST00000361796 FOXD4L5Q5VV16 416 aaPredicted RBP10.2□□□□□ -0.78
CTNND1-204ENST00000361796 FOXD4L4Q8WXT5 416 aaPredicted RBP10.2□□□□□ -0.78
CTNND1-204ENST00000361796 RB1CC1Q8TDY2 1594 aa10.2□□□□□ -0.78
CTNND1-204ENST00000361796 HSP90B1P14625 803 aaKnown RBP10.2□□□□□ -0.78
CTNND1-204ENST00000361796 MEX3CQ5U5Q3 659 aaKnown RBP10.2□□□□□ -0.78
CTNND1-204ENST00000361796 CLUAP1Q96AJ1 413 aa10.19□□□□□ -0.78
CTNND1-204ENST00000361796 MSH5O43196 834 aa10.19□□□□□ -0.78
CTNND1-204ENST00000361796 CHMP3Q9Y3E7 222 aa10.19□□□□□ -0.78
CTNND1-204ENST00000361796 ANO8Q9HCE9 1232 aaPredicted RBP10.19□□□□□ -0.78
CTNND1-204ENST00000361796 SETD5Q9C0A6 1442 aa10.19□□□□□ -0.78
CTNND1-204ENST00000361796 KIAA1211Q6ZU35 1233 aa10.19□□□□□ -0.78
CTNND1-204ENST00000361796 CSB-PGBD3P0DP91 1061 aa10.18□□□□□ -0.78
CTNND1-204ENST00000361796 CCER2I3L3R5 266 aa10.17□□□□□ -0.78
CTNND1-204ENST00000361796 CUX2O14529 1486 aa10.17□□□□□ -0.78
CTNND1-204ENST00000361796 TRIM6-TRIM34B2RNG4 842 aa10.17□□□□□ -0.78
CTNND1-204ENST00000361796 HDGFL2Q7Z4V5 671 aaPredicted RBP10.17□□□□□ -0.78
CTNND1-204ENST00000361796 ARHGAP35Q9NRY4 1499 aa10.17□□□□□ -0.78
CTNND1-204ENST00000361796 SLC4A10Q6U841 1118 aa10.17□□□□□ -0.78
CTNND1-204ENST00000361796 G3V3G9 751 aa10.16□□□□□ -0.78
CTNND1-204ENST00000361796 DCAF8Q5TAQ9 597 aa10.16□□□□□ -0.78
CTNND1-204ENST00000361796 CREBRFQ8IUR6 639 aa10.15□□□□□ -0.78
CTNND1-204ENST00000361796 SMC4Q9NTJ3 1288 aa10.15□□□□□ -0.78
CTNND1-204ENST00000361796 NUTM2FA1L443 756 aa10.15□□□□□ -0.78
CTNND1-204ENST00000361796 GBP4Q96PP9 640 aa10.15□□□□□ -0.78
CTNND1-204ENST00000361796 CARMIL1Q5VZK9 1371 aa10.15□□□□□ -0.78
CTNND1-204ENST00000361796 ABCC8Q09428 1581 aa10.15□□□□□ -0.78
CTNND1-204ENST00000361796 TSHZ2Q9NRE2 1034 aa10.15□□□□□ -0.79
CTNND1-204ENST00000361796 IPO8O15397 1037 aaKnown RBP10.14□□□□□ -0.79
CTNND1-204ENST00000361796 RWDD1Q9H446 243 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-204ENST00000361796 RRP7AQ9Y3A4 280 aaKnown RBP10.14□□□□□ -0.79
CTNND1-204ENST00000361796 RAB3GAP2Q9H2M9 1393 aa10.14□□□□□ -0.79
CTNND1-204ENST00000361796 SLC4A3P48751 1232 aa10.13□□□□□ -0.79
CTNND1-204ENST00000361796 FHAD1B1AJZ9 1412 aa10.13□□□□□ -0.79
CTNND1-204ENST00000361796 MPHOSPH9Q99550 1183 aa10.13□□□□□ -0.79
CTNND1-204ENST00000361796 NOC3LQ8WTT2 800 aaKnown RBP10.13□□□□□ -0.79
CTNND1-204ENST00000361796 LTV1Q96GA3 475 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-204ENST00000361796 FOXD4L6Q3SYB3 417 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-204ENST00000361796 FOXD4L3Q6VB84 417 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-204ENST00000361796 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.12□□□□□ -0.792e-8■□□□□ 11.3
CTNND1-204ENST00000361796 GORABQ5T7V8 394 aa10.12□□□□□ -0.79
CTNND1-204ENST00000361796 KIAA2012Q0VF49 1180 aa10.12□□□□□ -0.79
CTNND1-204ENST00000361796 GOLGA6L3A6NEY3 463 aa10.11□□□□□ -0.79
CTNND1-204ENST00000361796 NUP155O75694 1391 aa10.11□□□□□ -0.79
CTNND1-204ENST00000361796 PLIN1O60240 522 aa10.11□□□□□ -0.79
CTNND1-204ENST00000361796 BCL2L13Q9BXK5 485 aa10.1□□□□□ -0.79
CTNND1-204ENST00000361796 TAF7LQ5H9L4 462 aa10.1□□□□□ -0.79
CTNND1-204ENST00000361796 HDGFP51858 240 aaKnown RBP10.09□□□□□ -0.79
CTNND1-204ENST00000361796 CECR2Q9BXF3 1484 aa10.09□□□□□ -0.79
CTNND1-204ENST00000361796 TCERG1O14776 1098 aaKnown RBP10.09□□□□□ -0.79
CTNND1-204ENST00000361796 HNRNPMP52272 730 aaKnown RBP eCLIP10.09□□□□□ -0.795e-7■■■■□ 21
CTNND1-204ENST00000361796 PMFBP1Q8TBY8 1022 aa10.09□□□□□ -0.79
CTNND1-204ENST00000361796 IPO9Q96P70 1041 aaKnown RBP10.09□□□□□ -0.79
CTNND1-204ENST00000361796 STK31Q9BXU1 1019 aa10.09□□□□□ -0.79
CTNND1-204ENST00000361796 RALBP1Q15311 655 aa10.08□□□□□ -0.8
CTNND1-204ENST00000361796 ELL2O00472 640 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-204ENST00000361796 CNKSR2Q8WXI2 1034 aa10.08□□□□□ -0.8
CTNND1-204ENST00000361796 TOMM22Q9NS69 142 aa10.08□□□□□ -0.8
CTNND1-204ENST00000361796 RASSF8Q8NHQ8 419 aa10.08□□□□□ -0.8
CTNND1-204ENST00000361796 SPAG9O60271 1321 aaKnown RBP10.07□□□□□ -0.8
CTNND1-204ENST00000361796 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms