RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.95■□□□□ 0.46
SGMS1-202ENST00000361781 CUX1P39880 1505 aa17.95■□□□□ 0.46
SGMS1-202ENST00000361781 TOP2BQ02880 1626 aa17.94■□□□□ 0.46
SGMS1-202ENST00000361781 DDRGK1Q96HY6 314 aa17.94■□□□□ 0.46
SGMS1-202ENST00000361781 TNNT2P45379 298 aaPredicted RBP17.93■□□□□ 0.46
SGMS1-202ENST00000361781 PDE4AP27815 886 aa17.92■□□□□ 0.46
SGMS1-202ENST00000361781 KNSTRNQ9Y448 316 aa17.91■□□□□ 0.46
SGMS1-202ENST00000361781 MAPKBP1O60336 1514 aa17.91■□□□□ 0.46
SGMS1-202ENST00000361781 FRAT1Q92837 279 aaPredicted RBP17.9■□□□□ 0.46
SGMS1-202ENST00000361781 CNTLNQ9NXG0 1405 aa17.89■□□□□ 0.45
SGMS1-202ENST00000361781 TIAM1Q13009 1591 aa17.89■□□□□ 0.45
SGMS1-202ENST00000361781 UPF2Q9HAU5 1272 aaKnown RBP17.89■□□□□ 0.45
SGMS1-202ENST00000361781 NUP155O75694 1391 aa17.88■□□□□ 0.45
SGMS1-202ENST00000361781 SKAP1Q86WV1 359 aa17.88■□□□□ 0.45
SGMS1-202ENST00000361781 TCERG1O14776 1098 aaKnown RBP17.88■□□□□ 0.45
SGMS1-202ENST00000361781 SPRYD3Q8NCJ5 442 aa17.88■□□□□ 0.45
SGMS1-202ENST00000361781 USP47Q96K76 1375 aa17.86■□□□□ 0.45
SGMS1-202ENST00000361781 RRP1P56182 461 aaKnown RBP17.86■□□□□ 0.45
SGMS1-202ENST00000361781 IL27Q8NEV9 243 aa17.86■□□□□ 0.45
SGMS1-202ENST00000361781 CDCA7LQ96GN5 454 aa17.85■□□□□ 0.45
SGMS1-202ENST00000361781 CFTRP13569 1480 aa17.84■□□□□ 0.45
SGMS1-202ENST00000361781 MYOM3Q5VTT5 1437 aa17.83■□□□□ 0.45
SGMS1-202ENST00000361781 SLKQ9H2G2 1235 aaPredicted RBP17.83■□□□□ 0.44
SGMS1-202ENST00000361781 HSP90AA1P07900 732 aaKnown RBP17.83■□□□□ 0.44
SGMS1-202ENST00000361781 CRBNQ96SW2 442 aa17.83■□□□□ 0.44
SGMS1-202ENST00000361781 NCOA2Q15596 1464 aa17.82■□□□□ 0.44
SGMS1-202ENST00000361781 ANO8Q9HCE9 1232 aaPredicted RBP17.82■□□□□ 0.44
SGMS1-202ENST00000361781 ROCK2O75116 1388 aaKnown RBP17.82■□□□□ 0.44
SGMS1-202ENST00000361781 CCDC146Q8IYE0 955 aa17.81■□□□□ 0.44
SGMS1-202ENST00000361781 KTN1Q86UP2 1357 aaKnown RBP17.81■□□□□ 0.44
SGMS1-202ENST00000361781 NLRP13Q86W25 1043 aa17.81■□□□□ 0.44
SGMS1-202ENST00000361781 UNC13AQ9UPW8 1703 aa17.81■□□□□ 0.44
SGMS1-202ENST00000361781 HNRNPMP52272 730 aaKnown RBP eCLIP17.8■□□□□ 0.442e-6■■■■□ 21.2
SGMS1-202ENST00000361781 FANCD2Q9BXW9 1451 aa17.8■□□□□ 0.44
SGMS1-202ENST00000361781 RALBP1Q15311 655 aa17.79■□□□□ 0.44
SGMS1-202ENST00000361781 DNAJC5BQ9UF47 199 aa17.79■□□□□ 0.44
SGMS1-202ENST00000361781 CASKIN1Q8WXD9 1431 aa17.78■□□□□ 0.44
SGMS1-202ENST00000361781 NAIPQ13075 1403 aa17.78■□□□□ 0.44
SGMS1-202ENST00000361781 HFM1A2PYH4 1435 aa17.76■□□□□ 0.43
SGMS1-202ENST00000361781 TMF1P82094 1093 aa17.76■□□□□ 0.43
SGMS1-202ENST00000361781 MYBBP1AQ9BQG0 1328 aaKnown RBP17.76■□□□□ 0.43
SGMS1-202ENST00000361781 PANK3Q9H999 370 aa17.75■□□□□ 0.43
SGMS1-202ENST00000361781 BICRAQ9NZM4 1560 aa17.75■□□□□ 0.43
SGMS1-202ENST00000361781 BECN1Q14457 450 aa17.73■□□□□ 0.43
SGMS1-202ENST00000361781 PNISRQ8TF01 805 aaKnown RBP17.73■□□□□ 0.43
SGMS1-202ENST00000361781 GZF1Q9H116 711 aaPredicted RBP17.73■□□□□ 0.43
SGMS1-202ENST00000361781 NCAPD3P42695 1498 aa17.73■□□□□ 0.43
SGMS1-202ENST00000361781 PTPRKQ15262 1439 aa17.72■□□□□ 0.43
SGMS1-202ENST00000361781 KIF15Q9NS87 1388 aa17.72■□□□□ 0.43
SGMS1-202ENST00000361781 PCF11O94913 1555 aaKnown RBP17.71■□□□□ 0.42
SGMS1-202ENST00000361781 CLUAP1Q96AJ1 413 aa17.7■□□□□ 0.42
SGMS1-202ENST00000361781 BRPF3Q9ULD4 1205 aa17.69■□□□□ 0.42
SGMS1-202ENST00000361781 AQRO60306 1485 aaKnown RBP eCLIP17.69■□□□□ 0.423e-7■■■■□ 26.7
SGMS1-202ENST00000361781 FYCO1Q9BQS8 1478 aa17.68■□□□□ 0.42
SGMS1-202ENST00000361781 ANKRD30AQ9BXX3 1397 aa17.68■□□□□ 0.42
SGMS1-202ENST00000361781 ARID4BQ4LE39 1312 aaPredicted RBP17.66■□□□□ 0.42
SGMS1-202ENST00000361781 BCL2L13Q9BXK5 485 aa17.66■□□□□ 0.42
SGMS1-202ENST00000361781 SLC24A1O60721 1099 aa17.65■□□□□ 0.42
SGMS1-202ENST00000361781 GOLGA2Q08379 1002 aa17.65■□□□□ 0.42
SGMS1-202ENST00000361781 GSE1Q14687 1217 aa17.65■□□□□ 0.42
SGMS1-202ENST00000361781 PDE3BQ13370 1112 aa17.64■□□□□ 0.41
SGMS1-202ENST00000361781 NBPF1Q3BBV0 1214 aa17.64■□□□□ 0.41
SGMS1-202ENST00000361781 RRP7AQ9Y3A4 280 aaKnown RBP17.64■□□□□ 0.41
SGMS1-202ENST00000361781 NAP1L5Q96NT1 182 aaPredicted RBP17.63■□□□□ 0.41
SGMS1-202ENST00000361781 PDS5BQ9NTI5 1447 aa17.63■□□□□ 0.41
SGMS1-202ENST00000361781 NESP48681 1621 aa17.63■□□□□ 0.41
SGMS1-202ENST00000361781 FTSJ3Q8IY81 847 aaKnown RBP17.63■□□□□ 0.41
SGMS1-202ENST00000361781 NFKBIBQ15653 356 aa17.63■□□□□ 0.41
SGMS1-202ENST00000361781 GAPVD1Q14C86 1478 aa17.6■□□□□ 0.41
SGMS1-202ENST00000361781 APAF1O14727 1248 aa17.6■□□□□ 0.41
SGMS1-202ENST00000361781 SAFB2Q14151 953 aaKnown RBP eCLIP17.6■□□□□ 0.41
SGMS1-202ENST00000361781 BACH2Q9BYV9 841 aa17.6■□□□□ 0.41
SGMS1-202ENST00000361781 ADAMTS8Q9UP79 889 aa17.6■□□□□ 0.41
SGMS1-202ENST00000361781 CDCA8Q53HL2 280 aa17.59■□□□□ 0.41
SGMS1-202ENST00000361781 SMG6Q86US8 1419 aaKnown RBP17.59■□□□□ 0.41
SGMS1-202ENST00000361781 USP35Q9P2H5 1018 aa17.59■□□□□ 0.41
SGMS1-202ENST00000361781 COG6Q9Y2V7 657 aa17.59■□□□□ 0.41
SGMS1-202ENST00000361781 U2SURPO15042 1029 aaKnown RBP17.58■□□□□ 0.4
SGMS1-202ENST00000361781 FAM161AQ3B820 660 aa17.58■□□□□ 0.4
SGMS1-202ENST00000361781 C20orf194Q5TEA3 1177 aa17.57■□□□□ 0.4
SGMS1-202ENST00000361781 FRAT2O75474 233 aaPredicted RBP17.56■□□□□ 0.4
SGMS1-202ENST00000361781 MS4A1P11836 297 aa17.56■□□□□ 0.4
SGMS1-202ENST00000361781 ANP32BQ92688 251 aaKnown RBP17.55■□□□□ 0.4
SGMS1-202ENST00000361781 POLA1P09884 1462 aaPredicted RBP17.55■□□□□ 0.4
SGMS1-202ENST00000361781 NCLP19338 710 aaKnown RBP17.54■□□□□ 0.4
SGMS1-202ENST00000361781 CENPQQ7L2Z9 268 aaPredicted RBP17.54■□□□□ 0.4
SGMS1-202ENST00000361781 TPRNQ4KMQ1 711 aa17.54■□□□□ 0.4
SGMS1-202ENST00000361781 NCOA1Q15788 1441 aa17.54■□□□□ 0.4
SGMS1-202ENST00000361781 TRIM44Q96DX7 344 aaPredicted RBP17.54■□□□□ 0.4
SGMS1-202ENST00000361781 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.53■□□□□ 0.41e-7■□□□□ 9.5
SGMS1-202ENST00000361781 MORC1Q86VD1 984 aa17.52■□□□□ 0.4
SGMS1-202ENST00000361781 JPH4Q96JJ6 628 aa17.52■□□□□ 0.4
SGMS1-202ENST00000361781 ANKRD30BQ9BXX2 1392 aa17.52■□□□□ 0.4
SGMS1-202ENST00000361781 PEG3Q9GZU2 1588 aa17.52■□□□□ 0.4
SGMS1-202ENST00000361781 CDK13Q14004 1512 aaKnown RBP17.52■□□□□ 0.39
SGMS1-202ENST00000361781 MFAP1P55081 439 aaKnown RBP17.51■□□□□ 0.39
SGMS1-202ENST00000361781 BIVM-ERCC5R4GMW8 1640 aa17.51■□□□□ 0.39
SGMS1-202ENST00000361781 PRKCSHP14314 528 aaPredicted RBP17.51■□□□□ 0.39
SGMS1-202ENST00000361781 BRD4O60885 1362 aaPredicted RBP17.5■□□□□ 0.39
SGMS1-202ENST00000361781 PTPN23Q9H3S7 1636 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms