RNA–Protein interactions for RNA: ENST00000360453.8

PPARGC1B-202, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPARGC1B, Length 3,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-202ENST00000360453 SAMD9Q5K651 1589 aa18.46■□□□□ 0.55
PPARGC1B-202ENST00000360453 EPRSP07814 1512 aaKnown RBP18.4■□□□□ 0.54
PPARGC1B-202ENST00000360453 NCOA1Q15788 1441 aa18.39■□□□□ 0.53
PPARGC1B-202ENST00000360453 AKNAQ7Z591 1439 aa18.39■□□□□ 0.53
PPARGC1B-202ENST00000360453 THOC2Q8NI27 1593 aaKnown RBP18.39■□□□□ 0.53
PPARGC1B-202ENST00000360453 LAMC3Q9Y6N6 1575 aa18.39■□□□□ 0.53
PPARGC1B-202ENST00000360453 SALL2Q9Y467 1007 aaPredicted RBP18.38■□□□□ 0.53
PPARGC1B-202ENST00000360453 FANCIQ9NVI1 1328 aa18.38■□□□□ 0.53
PPARGC1B-202ENST00000360453 ABCA5Q8WWZ7 1642 aa18.38■□□□□ 0.53
PPARGC1B-202ENST00000360453 ANKRD30BQ9BXX2 1392 aa18.37■□□□□ 0.53
PPARGC1B-202ENST00000360453 PDS5BQ9NTI5 1447 aa18.37■□□□□ 0.53
PPARGC1B-202ENST00000360453 ZBED9Q6R2W3 1325 aa18.36■□□□□ 0.53
PPARGC1B-202ENST00000360453 NBR1Q14596 966 aa18.36■□□□□ 0.53
PPARGC1B-202ENST00000360453 ARHGEF11O15085 1522 aa18.35■□□□□ 0.53
PPARGC1B-202ENST00000360453 KDM2AQ9Y2K7 1162 aa18.34■□□□□ 0.53
PPARGC1B-202ENST00000360453 TCOF1Q13428 1488 aaKnown RBP18.33■□□□□ 0.52
PPARGC1B-202ENST00000360453 HECW1Q76N89 1606 aa18.33■□□□□ 0.52
PPARGC1B-202ENST00000360453 DAPK1P53355 1430 aa18.31■□□□□ 0.52
PPARGC1B-202ENST00000360453 ABCC5O15440 1437 aa18.31■□□□□ 0.52
PPARGC1B-202ENST00000360453 PAK3O75914 559 aaPredicted RBP18.31■□□□□ 0.52
PPARGC1B-202ENST00000360453 GCC2Q8IWJ2 1684 aa18.3■□□□□ 0.52
PPARGC1B-202ENST00000360453 PKD2Q13563 968 aa18.3■□□□□ 0.52
PPARGC1B-202ENST00000360453 RPRD2Q5VT52 1461 aaKnown RBP18.29■□□□□ 0.52
PPARGC1B-202ENST00000360453 FBLN2P98095 1184 aa18.29■□□□□ 0.52
PPARGC1B-202ENST00000360453 CFDP1Q9UEE9 299 aaPredicted RBP18.29■□□□□ 0.52
PPARGC1B-202ENST00000360453 CCDC136Q96JN2 1154 aa18.28■□□□□ 0.52
PPARGC1B-202ENST00000360453 TEX14Q8IWB6 1497 aa18.28■□□□□ 0.52
PPARGC1B-202ENST00000360453 IQGAP2Q13576 1575 aa18.26■□□□□ 0.51
PPARGC1B-202ENST00000360453 MIA2Q96PC5 1412 aa18.26■□□□□ 0.51
PPARGC1B-202ENST00000360453 SPATA31E1Q6ZUB1 1445 aa18.26■□□□□ 0.51
PPARGC1B-202ENST00000360453 KIF21AQ7Z4S6 1674 aa18.26■□□□□ 0.51
PPARGC1B-202ENST00000360453 USP47Q96K76 1375 aa18.25■□□□□ 0.51
PPARGC1B-202ENST00000360453 PRG4Q92954 1404 aaPredicted RBP18.25■□□□□ 0.51
PPARGC1B-202ENST00000360453 TMC1Q8TDI8 760 aa18.25■□□□□ 0.51
PPARGC1B-202ENST00000360453 ERICH6BQ5W0A0 696 aa18.23■□□□□ 0.51
PPARGC1B-202ENST00000360453 WDR62O43379 1518 aa18.22■□□□□ 0.51
PPARGC1B-202ENST00000360453 DHX29Q7Z478 1369 aaKnown RBP18.22■□□□□ 0.51
PPARGC1B-202ENST00000360453 NUDCQ9Y266 331 aa18.22■□□□□ 0.51
PPARGC1B-202ENST00000360453 ZNF608Q9ULD9 1512 aaPredicted RBP18.21■□□□□ 0.51
PPARGC1B-202ENST00000360453 CARD11Q9BXL7 1154 aa18.21■□□□□ 0.51
PPARGC1B-202ENST00000360453 TARBP1Q13395 1621 aaKnown RBP18.2■□□□□ 0.5
PPARGC1B-202ENST00000360453 NPM2Q86SE8 214 aaKnown RBP18.19■□□□□ 0.5
PPARGC1B-202ENST00000360453 ST20-MTHFSA0A0A6YYL1 179 aa18.19■□□□□ 0.5
PPARGC1B-202ENST00000360453 DEKP35659 375 aaKnown RBP18.19■□□□□ 0.5
PPARGC1B-202ENST00000360453 NOP58Q9Y2X3 529 aaKnown RBP18.19■□□□□ 0.5
PPARGC1B-202ENST00000360453 PZPP20742 1482 aa18.18■□□□□ 0.5
PPARGC1B-202ENST00000360453 NUP153P49790 1475 aaKnown RBP18.17■□□□□ 0.5
PPARGC1B-202ENST00000360453 PNISRQ8TF01 805 aaKnown RBP18.17■□□□□ 0.5
PPARGC1B-202ENST00000360453 DCAF11Q8TEB1 546 aa18.16■□□□□ 0.5
PPARGC1B-202ENST00000360453 BCORL1Q5H9F3 1711 aa18.16■□□□□ 0.5
PPARGC1B-202ENST00000360453 ROCK1Q13464 1354 aa18.15■□□□□ 0.5
PPARGC1B-202ENST00000360453 RGL3Q3MIN7 710 aa18.14■□□□□ 0.49
PPARGC1B-202ENST00000360453 PBRM1Q86U86 1689 aa18.14■□□□□ 0.49
PPARGC1B-202ENST00000360453 SKAP1Q86WV1 359 aa18.14■□□□□ 0.49
PPARGC1B-202ENST00000360453 SMG6Q86US8 1419 aaKnown RBP18.14■□□□□ 0.49
PPARGC1B-202ENST00000360453 PLB1Q6P1J6 1458 aa18.13■□□□□ 0.49
PPARGC1B-202ENST00000360453 NUP155O75694 1391 aa18.13■□□□□ 0.49
PPARGC1B-202ENST00000360453 DNMT1P26358 1616 aaKnown RBP18.12■□□□□ 0.49
PPARGC1B-202ENST00000360453 EXOC6Q8TAG9 804 aa18.12■□□□□ 0.49
PPARGC1B-202ENST00000360453 ADAMTS12P58397 1594 aa18.11■□□□□ 0.49
PPARGC1B-202ENST00000360453 DISP1Q96F81 1524 aa18.11■□□□□ 0.49
PPARGC1B-202ENST00000360453 CAMSAP2Q08AD1 1489 aa18.11■□□□□ 0.49
PPARGC1B-202ENST00000360453 HNRNPMP52272 730 aaKnown RBP eCLIP18.09■□□□□ 0.492e-6■■■■□ 26
PPARGC1B-202ENST00000360453 KIAA1107Q9UPP5 1409 aa18.09■□□□□ 0.49
PPARGC1B-202ENST00000360453 CHMP7Q8WUX9 453 aaPredicted RBP18.09■□□□□ 0.49
PPARGC1B-202ENST00000360453 PLIN1O60240 522 aa18.08■□□□□ 0.48
PPARGC1B-202ENST00000360453 ANP32AP39687 249 aaKnown RBP18.08■□□□□ 0.48
PPARGC1B-202ENST00000360453 CDCA7LQ96GN5 454 aa18.08■□□□□ 0.48
PPARGC1B-202ENST00000360453 CC2D1BQ5T0F9 858 aaKnown RBP18.06■□□□□ 0.48
PPARGC1B-202ENST00000360453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.06■□□□□ 0.48
PPARGC1B-202ENST00000360453 ANKRD50Q9ULJ7 1429 aa18.06■□□□□ 0.48
PPARGC1B-202ENST00000360453 GPATCH8Q9UKJ3 1502 aaKnown RBP18.05■□□□□ 0.48
PPARGC1B-202ENST00000360453 KIF14Q15058 1648 aa18.05■□□□□ 0.48
PPARGC1B-202ENST00000360453 KIAA0556O60303 1618 aa18.04■□□□□ 0.48
PPARGC1B-202ENST00000360453 NBPF1Q3BBV0 1214 aa18.04■□□□□ 0.48
PPARGC1B-202ENST00000360453 ANKRD30AQ9BXX3 1397 aa18.04■□□□□ 0.48
PPARGC1B-202ENST00000360453 ZBTB47Q9UFB7 747 aaPredicted RBP18.04■□□□□ 0.48
PPARGC1B-202ENST00000360453 TROQ12816 1431 aaPredicted RBP18.03■□□□□ 0.48
PPARGC1B-202ENST00000360453 IPO9Q96P70 1041 aaKnown RBP18.02■□□□□ 0.48
PPARGC1B-202ENST00000360453 MBD5Q9P267 1494 aa18.02■□□□□ 0.48
PPARGC1B-202ENST00000360453 RNF123Q5XPI4 1314 aa18.02■□□□□ 0.48
PPARGC1B-202ENST00000360453 RAPGEF6Q8TEU7 1601 aa18.02■□□□□ 0.47
PPARGC1B-202ENST00000360453 LAS1LQ9Y4W2 734 aaKnown RBP18.01■□□□□ 0.47
PPARGC1B-202ENST00000360453 KIAA0586Q9BVV6 1533 aa18.01■□□□□ 0.47
PPARGC1B-202ENST00000360453 TSPY4P0CV99 314 aa18.01■□□□□ 0.47
PPARGC1B-202ENST00000360453 TSPY10P0CW01 314 aa18.01■□□□□ 0.47
PPARGC1B-202ENST00000360453 PLEKHD1A6NEE1 506 aa18.01■□□□□ 0.47
PPARGC1B-202ENST00000360453 RRP1P56182 461 aaKnown RBP18.01■□□□□ 0.47
PPARGC1B-202ENST00000360453 RCAN3Q9UKA8 241 aa18■□□□□ 0.47
PPARGC1B-202ENST00000360453 ROCK2O75116 1388 aaKnown RBP18■□□□□ 0.47
PPARGC1B-202ENST00000360453 KIF15Q9NS87 1388 aa17.99■□□□□ 0.47
PPARGC1B-202ENST00000360453 KDM5CP41229 1560 aa17.99■□□□□ 0.47
PPARGC1B-202ENST00000360453 MYBBP1AQ9BQG0 1328 aaKnown RBP17.99■□□□□ 0.47
PPARGC1B-202ENST00000360453 JPH4Q96JJ6 628 aa17.98■□□□□ 0.47
PPARGC1B-202ENST00000360453 MRC2Q9UBG0 1479 aa17.97■□□□□ 0.47
PPARGC1B-202ENST00000360453 POLR1AO95602 1720 aaPredicted RBP17.96■□□□□ 0.47
PPARGC1B-202ENST00000360453 GRIN2AQ12879 1464 aa17.96■□□□□ 0.47
PPARGC1B-202ENST00000360453 C9orf84Q5VXU9 1444 aa17.94■□□□□ 0.46
PPARGC1B-202ENST00000360453 RTL5Q5HYW3 569 aaPredicted RBP17.94■□□□□ 0.46
PPARGC1B-202ENST00000360453 RALBP1Q15311 655 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms