RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 CAMSAP2Q08AD1 1489 aa29.74■■■□□ 2.35
CBWD3-201ENST00000360171 CDC42BPBQ9Y5S2 1711 aa29.74■■■□□ 2.35
CBWD3-201ENST00000360171 PREX2Q70Z35 1606 aa29.74■■■□□ 2.35
CBWD3-201ENST00000360171 DNMT1P26358 1616 aaKnown RBP29.72■■■□□ 2.35
CBWD3-201ENST00000360171 CFDP1Q9UEE9 299 aaPredicted RBP29.71■■■□□ 2.35
CBWD3-201ENST00000360171 SETD5Q9C0A6 1442 aa29.71■■■□□ 2.35
CBWD3-201ENST00000360171 RAB3GAP2Q9H2M9 1393 aa29.71■■■□□ 2.35
CBWD3-201ENST00000360171 RIMBP3CA6NJZ7 1639 aa29.69■■■□□ 2.34
CBWD3-201ENST00000360171 RIMBP3BA6NNM3 1639 aa29.69■■■□□ 2.34
CBWD3-201ENST00000360171 RIMBP3Q9UFD9 1639 aa29.69■■■□□ 2.34
CBWD3-201ENST00000360171 MYO5CQ9NQX4 1742 aa29.68■■■□□ 2.34
CBWD3-201ENST00000360171 DAPK1P53355 1430 aa29.66■■■□□ 2.34
CBWD3-201ENST00000360171 WDR7Q9Y4E6 1490 aa29.64■■■□□ 2.34
CBWD3-201ENST00000360171 KCNH8Q96L42 1107 aa29.63■■■□□ 2.33
CBWD3-201ENST00000360171 HFM1A2PYH4 1435 aa29.63■■■□□ 2.33
CBWD3-201ENST00000360171 ABCC5O15440 1437 aa29.63■■■□□ 2.33
CBWD3-201ENST00000360171 CROCC2H7BZ55 1655 aa29.62■■■□□ 2.33
CBWD3-201ENST00000360171 ZNF777Q9ULD5 760 aaPredicted RBP29.62■■■□□ 2.33
CBWD3-201ENST00000360171 GCC2Q8IWJ2 1684 aa29.62■■■□□ 2.33
CBWD3-201ENST00000360171 DHX57Q6P158 1386 aaKnown RBP29.61■■■□□ 2.33
CBWD3-201ENST00000360171 SAMD9LQ8IVG5 1584 aa29.6■■■□□ 2.33
CBWD3-201ENST00000360171 NAIPQ13075 1403 aa29.59■■■□□ 2.33
CBWD3-201ENST00000360171 ASXL2Q76L83 1435 aa29.58■■■□□ 2.33
CBWD3-201ENST00000360171 CHIC2Q9UKJ5 165 aa29.57■■■□□ 2.32
CBWD3-201ENST00000360171 ARHGAP5Q13017 1502 aa29.56■■■□□ 2.32
CBWD3-201ENST00000360171 MIER1Q8N108 512 aa29.56■■■□□ 2.32
CBWD3-201ENST00000360171 AKNAQ7Z591 1439 aa29.55■■■□□ 2.32
CBWD3-201ENST00000360171 ADGBQ8N7X0 1667 aa29.54■■■□□ 2.32
CBWD3-201ENST00000360171 ABCA9Q8IUA7 1624 aa29.51■■■□□ 2.31
CBWD3-201ENST00000360171 RRP7BPQ9NSQ0 103 aa29.5■■■□□ 2.31
CBWD3-201ENST00000360171 ARHGEF5Q12774 1597 aa29.49■■■□□ 2.31
CBWD3-201ENST00000360171 PLCH2O75038 1416 aa29.49■■■□□ 2.31
CBWD3-201ENST00000360171 KDM6BO15054 1643 aa29.49■■■□□ 2.31
CBWD3-201ENST00000360171 NPM1P06748 294 aaKnown RBP eCLIP29.48■■■□□ 2.31
CBWD3-201ENST00000360171 ROCK1Q13464 1354 aa29.48■■■□□ 2.31
CBWD3-201ENST00000360171 MBD5Q9P267 1494 aa29.47■■■□□ 2.31
CBWD3-201ENST00000360171 CYB5RLQ6IPT4 315 aa29.46■■■□□ 2.31
CBWD3-201ENST00000360171 SYCP2Q9BX26 1530 aa29.45■■■□□ 2.31
CBWD3-201ENST00000360171 SHANK2Q9UPX8 1470 aa29.43■■■□□ 2.3
CBWD3-201ENST00000360171 ARAP3Q8WWN8 1544 aa29.43■■■□□ 2.3
CBWD3-201ENST00000360171 ADGRL2O95490 1459 aa29.43■■■□□ 2.3
CBWD3-201ENST00000360171 HNRNPMP52272 730 aaKnown RBP eCLIP29.41■■■□□ 2.3
CBWD3-201ENST00000360171 MAPKBP1O60336 1514 aa29.41■■■□□ 2.3
CBWD3-201ENST00000360171 CCDC141Q6ZP82 1450 aa29.38■■■□□ 2.29
CBWD3-201ENST00000360171 C9orf84Q5VXU9 1444 aa29.38■■■□□ 2.29
CBWD3-201ENST00000360171 NCOA1Q15788 1441 aa29.37■■■□□ 2.29
CBWD3-201ENST00000360171 ABCC1P33527 1531 aa29.37■■■□□ 2.29
CBWD3-201ENST00000360171 PLEKHH2Q8IVE3 1493 aa29.36■■■□□ 2.29
CBWD3-201ENST00000360171 YTHDC1Q96MU7 727 aaKnown RBP29.36■■■□□ 2.29
CBWD3-201ENST00000360171 ARHGEF12Q9NZN5 1544 aa29.36■■■□□ 2.29
CBWD3-201ENST00000360171 KIAA1107Q9UPP5 1409 aa29.35■■■□□ 2.29
CBWD3-201ENST00000360171 EFCAB2Q5VUJ9 269 aa29.33■■■□□ 2.29
CBWD3-201ENST00000360171 ANKRD30AQ9BXX3 1397 aa29.3■■■□□ 2.28
CBWD3-201ENST00000360171 MAST1Q9Y2H9 1570 aa29.3■■■□□ 2.28
CBWD3-201ENST00000360171 FANCAO15360 1455 aa29.29■■■□□ 2.28
CBWD3-201ENST00000360171 TSPY4P0CV99 314 aa29.27■■■□□ 2.28
CBWD3-201ENST00000360171 TSPY10P0CW01 314 aa29.27■■■□□ 2.28
CBWD3-201ENST00000360171 RSPH4AQ5TD94 716 aa29.26■■■□□ 2.28
CBWD3-201ENST00000360171 TRAPPC8Q9Y2L5 1435 aa29.23■■■□□ 2.27
CBWD3-201ENST00000360171 CD109Q6YHK3 1445 aa29.2■■■□□ 2.27
CBWD3-201ENST00000360171 PLXNC1O60486 1568 aa29.19■■■□□ 2.26
CBWD3-201ENST00000360171 KIF15Q9NS87 1388 aa29.18■■■□□ 2.26
CBWD3-201ENST00000360171 DENND4BO75064 1496 aaPredicted RBP29.18■■■□□ 2.26
CBWD3-201ENST00000360171 ANKRD50Q9ULJ7 1429 aa29.18■■■□□ 2.26
CBWD3-201ENST00000360171 CFAP74Q9C0B2 1584 aa29.17■■■□□ 2.26
CBWD3-201ENST00000360171 MAP3K4Q9Y6R4 1608 aa29.17■■■□□ 2.26
CBWD3-201ENST00000360171 TRIM52Q96A61 297 aa29.16■■■□□ 2.26
CBWD3-201ENST00000360171 ADGRL1O94910 1474 aa29.16■■■□□ 2.26
CBWD3-201ENST00000360171 GLI2P10070 1586 aa29.14■■■□□ 2.25
CBWD3-201ENST00000360171 DIP2BQ9P265 1576 aa29.13■■■□□ 2.25
CBWD3-201ENST00000360171 SCAPERQ9BY12 1400 aa29.1■■■□□ 2.25
CBWD3-201ENST00000360171 ZFYVE16Q7Z3T8 1539 aa29.1■■■□□ 2.25
CBWD3-201ENST00000360171 AFAP1Q8N556 730 aa29.08■■■□□ 2.25
CBWD3-201ENST00000360171 INO80Q9ULG1 1556 aaPredicted RBP29.08■■■□□ 2.25
CBWD3-201ENST00000360171 PZPP20742 1482 aa29.07■■■□□ 2.24
CBWD3-201ENST00000360171 SIN3AQ96ST3 1273 aa29.07■■■□□ 2.24
CBWD3-201ENST00000360171 MPHOSPH9Q99550 1183 aa29.06■■■□□ 2.24
CBWD3-201ENST00000360171 DUOX2Q9NRD8 1548 aa29.03■■■□□ 2.24
CBWD3-201ENST00000360171 RTEL1-TNFRSF6BF6WH68 1400 aa29.03■■■□□ 2.24
CBWD3-201ENST00000360171 ATP7AQ04656 1500 aa29.03■■■□□ 2.24
CBWD3-201ENST00000360171 SPAG9O60271 1321 aaKnown RBP29.03■■■□□ 2.24
CBWD3-201ENST00000360171 NEO1Q92859 1461 aa29.01■■■□□ 2.23
CBWD3-201ENST00000360171 KDM5DQ9BY66 1539 aa29.01■■■□□ 2.23
CBWD3-201ENST00000360171 MYT1Q01538 1121 aa28.99■■■□□ 2.23
CBWD3-201ENST00000360171 UNC13BO14795 1591 aa28.99■■■□□ 2.23
CBWD3-201ENST00000360171 KIF13AQ9H1H9 1805 aa28.98■■■□□ 2.23
CBWD3-201ENST00000360171 KIDINS220Q9ULH0 1771 aa28.97■■■□□ 2.23
CBWD3-201ENST00000360171 ZNF518AQ6AHZ1 1483 aa28.97■■■□□ 2.23
CBWD3-201ENST00000360171 PPRC1Q5VV67 1664 aaKnown RBP28.97■■■□□ 2.23
CBWD3-201ENST00000360171 TSPOAP1O95153 1857 aa28.97■■■□□ 2.23
CBWD3-201ENST00000360171 KDM5CP41229 1560 aa28.97■■■□□ 2.23
CBWD3-201ENST00000360171 FAM69CQ0P6D2 419 aa28.96■■■□□ 2.23
CBWD3-201ENST00000360171 POGZQ7Z3K3 1410 aa28.96■■■□□ 2.23
CBWD3-201ENST00000360171 SLC4A1APQ9BWU0 796 aaKnown RBP28.95■■■□□ 2.23
CBWD3-201ENST00000360171 ERBINQ96RT1 1412 aa28.95■■■□□ 2.23
CBWD3-201ENST00000360171 FOXD1Q16676 465 aa28.95■■■□□ 2.22
CBWD3-201ENST00000360171 NUP155O75694 1391 aa28.93■■■□□ 2.22
CBWD3-201ENST00000360171 RICTORQ6R327 1708 aa28.9■■■□□ 2.22
CBWD3-201ENST00000360171 TIMELESSQ9UNS1 1208 aa28.9■■■□□ 2.22
CBWD3-201ENST00000360171 HECW2Q9P2P5 1572 aa28.89■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms