RNA–Protein interactions for RNA: ENST00000359972.6

APAF1-203, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 7,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-203ENST00000359972 FOXD4L4Q8WXT5 416 aaPredicted RBP19.09■□□□□ 0.65
APAF1-203ENST00000359972 TPM4P67936 248 aa19.08■□□□□ 0.65
APAF1-203ENST00000359972 USP35Q9P2H5 1018 aa19.07■□□□□ 0.64
APAF1-203ENST00000359972 HSP90B1P14625 803 aaKnown RBP19.06■□□□□ 0.64
APAF1-203ENST00000359972 CCAR2Q8N163 923 aaKnown RBP19.06■□□□□ 0.64
APAF1-203ENST00000359972 NOL8Q76FK4 1167 aaKnown RBP19.05■□□□□ 0.64
APAF1-203ENST00000359972 ZNF592Q92610 1267 aa19.04■□□□□ 0.64
APAF1-203ENST00000359972 U2SURPO15042 1029 aaKnown RBP19.04■□□□□ 0.64
APAF1-203ENST00000359972 CCER2I3L3R5 266 aa19.03■□□□□ 0.64
APAF1-203ENST00000359972 CREBRFQ8IUR6 639 aa19.03■□□□□ 0.64
APAF1-203ENST00000359972 TAF7LQ5H9L4 462 aa19.02■□□□□ 0.64
APAF1-203ENST00000359972 RCAN3Q9UKA8 241 aa19.02■□□□□ 0.64
APAF1-203ENST00000359972 MTUS2Q5JR59 1369 aa19.01■□□□□ 0.63
APAF1-203ENST00000359972 TSPY4P0CV99 314 aa19■□□□□ 0.63
APAF1-203ENST00000359972 TSPY10P0CW01 314 aa19■□□□□ 0.63
APAF1-203ENST00000359972 DDX11L8A8MPP1 907 aa19■□□□□ 0.63
APAF1-203ENST00000359972 NUDCQ9Y266 331 aa18.99■□□□□ 0.63
APAF1-203ENST00000359972 BCL11BQ9C0K0 894 aaPredicted RBP18.98■□□□□ 0.63
APAF1-203ENST00000359972 KIAA1211Q6ZU35 1233 aa18.98■□□□□ 0.63
APAF1-203ENST00000359972 CFAP44Q96MT7 982 aa18.97■□□□□ 0.63
APAF1-203ENST00000359972 HTATSF1O43719 755 aaKnown RBP18.97■□□□□ 0.63
APAF1-203ENST00000359972 PHF14O94880 888 aa18.97■□□□□ 0.63
APAF1-203ENST00000359972 CDCA8Q53HL2 280 aa18.96■□□□□ 0.63
APAF1-203ENST00000359972 TEX35Q5T0J7 233 aa18.96■□□□□ 0.63
APAF1-203ENST00000359972 ITPRIPQ8IWB1 547 aa18.94■□□□□ 0.62
APAF1-203ENST00000359972 RWDD1Q9H446 243 aaPredicted RBP18.94■□□□□ 0.62
APAF1-203ENST00000359972 DDX49Q9Y6V7 483 aaKnown RBP18.94■□□□□ 0.62
APAF1-203ENST00000359972 TPM3P06753 285 aa18.93■□□□□ 0.62
APAF1-203ENST00000359972 GPS2Q13227 327 aa18.93■□□□□ 0.62
APAF1-203ENST00000359972 CLIP1P30622 1438 aa18.93■□□□□ 0.62
APAF1-203ENST00000359972 GOLGA2Q08379 1002 aa18.92■□□□□ 0.62
APAF1-203ENST00000359972 FOXD4L6Q3SYB3 417 aaPredicted RBP18.92■□□□□ 0.62
APAF1-203ENST00000359972 FOXD4L3Q6VB84 417 aaPredicted RBP18.92■□□□□ 0.62
APAF1-203ENST00000359972 FAM43AQ8N2R8 423 aa18.92■□□□□ 0.62
APAF1-203ENST00000359972 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.91■□□□□ 0.62
APAF1-203ENST00000359972 CSPP1Q1MSJ5 1256 aa18.91■□□□□ 0.62
APAF1-203ENST00000359972 PRM3Q9NNZ6 103 aa18.91■□□□□ 0.62
APAF1-203ENST00000359972 IL27Q8NEV9 243 aa18.9■□□□□ 0.62
APAF1-203ENST00000359972 ISY1Q9ULR0 285 aaKnown RBP18.89■□□□□ 0.61
APAF1-203ENST00000359972 R3HCC1Q9Y3T6 440 aaKnown RBP18.89■□□□□ 0.61
APAF1-203ENST00000359972 NOM1Q5C9Z4 860 aaKnown RBP18.89■□□□□ 0.61
APAF1-203ENST00000359972 PDE4AP27815 886 aa18.88■□□□□ 0.61
APAF1-203ENST00000359972 FANCIQ9NVI1 1328 aa18.87■□□□□ 0.61
APAF1-203ENST00000359972 RBM10P98175 930 aaKnown RBP18.86■□□□□ 0.61
APAF1-203ENST00000359972 PMFBP1Q8TBY8 1022 aa18.86■□□□□ 0.61
APAF1-203ENST00000359972 MAPK8IP2Q13387 824 aaPredicted RBP18.85■□□□□ 0.61
APAF1-203ENST00000359972 PPP1R15AO75807 674 aaPredicted RBP18.84■□□□□ 0.61
APAF1-203ENST00000359972 CEP162Q5TB80 1403 aa18.84■□□□□ 0.61
APAF1-203ENST00000359972 TRIM6-TRIM34B2RNG4 842 aa18.83■□□□□ 0.61
APAF1-203ENST00000359972 SKOR2Q2VWA4 1001 aaPredicted RBP18.83■□□□□ 0.61
APAF1-203ENST00000359972 BRPF3Q9ULD4 1205 aa18.83■□□□□ 0.6
APAF1-203ENST00000359972 HSPA5P11021 654 aaKnown RBP18.82■□□□□ 0.6
APAF1-203ENST00000359972 GOLGA6L19H0YKK7 550 aa18.82■□□□□ 0.6
APAF1-203ENST00000359972 PES1O00541 588 aaKnown RBP18.82■□□□□ 0.6
APAF1-203ENST00000359972 FBXO3Q9UK99 471 aa18.81■□□□□ 0.6
APAF1-203ENST00000359972 NPHP1O15259 732 aa18.8■□□□□ 0.6
APAF1-203ENST00000359972 ST18O60284 1047 aa18.78■□□□□ 0.6
APAF1-203ENST00000359972 RRP12Q5JTH9 1297 aaKnown RBP18.78■□□□□ 0.6
APAF1-203ENST00000359972 IPO8O15397 1037 aaKnown RBP18.78■□□□□ 0.6
APAF1-203ENST00000359972 KIF16BQ96L93 1317 aa18.78■□□□□ 0.6
APAF1-203ENST00000359972 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.77■□□□□ 0.6
APAF1-203ENST00000359972 ZCCHC6Q5VYS8 1495 aaKnown RBP18.77■□□□□ 0.6
APAF1-203ENST00000359972 FAM161AQ3B820 660 aa18.77■□□□□ 0.6
APAF1-203ENST00000359972 MAP7D2Q96T17 732 aa18.76■□□□□ 0.59
APAF1-203ENST00000359972 RASSF8Q8NHQ8 419 aa18.76■□□□□ 0.59
APAF1-203ENST00000359972 CCDC70Q6NSX1 233 aa18.76■□□□□ 0.59
APAF1-203ENST00000359972 HOMER1Q86YM7 354 aa18.76■□□□□ 0.59
APAF1-203ENST00000359972 BECN2A8MW95 431 aa18.75■□□□□ 0.59
APAF1-203ENST00000359972 CLUAP1Q96AJ1 413 aa18.75■□□□□ 0.59
APAF1-203ENST00000359972 KCNH8Q96L42 1107 aa18.75■□□□□ 0.59
APAF1-203ENST00000359972 TMF1P82094 1093 aa18.74■□□□□ 0.59
APAF1-203ENST00000359972 TPD52L1Q16890 204 aaPredicted RBP18.74■□□□□ 0.59
APAF1-203ENST00000359972 CCDC66A2RUB6 948 aa18.73■□□□□ 0.59
APAF1-203ENST00000359972 SF3A1Q15459 793 aaKnown RBP18.73■□□□□ 0.59
APAF1-203ENST00000359972 MORC1Q86VD1 984 aa18.73■□□□□ 0.59
APAF1-203ENST00000359972 PLCD4Q9BRC7 762 aa18.73■□□□□ 0.59
APAF1-203ENST00000359972 KTN1Q86UP2 1357 aaKnown RBP18.73■□□□□ 0.59
APAF1-203ENST00000359972 CEP89Q96ST8 783 aa18.72■□□□□ 0.59
APAF1-203ENST00000359972 TPM2P07951 284 aa18.72■□□□□ 0.59
APAF1-203ENST00000359972 HAP1P54257 671 aaPredicted RBP18.72■□□□□ 0.59
APAF1-203ENST00000359972 RDXP35241 583 aaKnown RBP18.72■□□□□ 0.59
APAF1-203ENST00000359972 CHMP3Q9Y3E7 222 aa18.71■□□□□ 0.59
APAF1-203ENST00000359972 BAZ1BQ9UIG0 1483 aaKnown RBP18.71■□□□□ 0.59
APAF1-203ENST00000359972 SOX12O15370 315 aa18.71■□□□□ 0.59
APAF1-203ENST00000359972 IFT57Q9NWB7 429 aa18.71■□□□□ 0.59
APAF1-203ENST00000359972 NFKBIBQ15653 356 aa18.71■□□□□ 0.59
APAF1-203ENST00000359972 HSP90AB3PQ58FF7 597 aa18.7■□□□□ 0.58
APAF1-203ENST00000359972 CCDC34Q96HJ3 373 aa18.7■□□□□ 0.58
APAF1-203ENST00000359972 CWC15Q9P013 229 aaKnown RBP18.7■□□□□ 0.58
APAF1-203ENST00000359972 H0YHG0 523 aa18.7■□□□□ 0.58
APAF1-203ENST00000359972 TSR1Q2NL82 804 aaKnown RBP18.7■□□□□ 0.58
APAF1-203ENST00000359972 POGKQ9P215 609 aa18.69■□□□□ 0.58
APAF1-203ENST00000359972 PLIN1O60240 522 aa18.69■□□□□ 0.58
APAF1-203ENST00000359972 MTERF4Q7Z6M4 381 aaKnown RBP18.68■□□□□ 0.58
APAF1-203ENST00000359972 H3BQV1 296 aa18.68■□□□□ 0.58
APAF1-203ENST00000359972 IFFO2Q5TF58 517 aa18.68■□□□□ 0.58
APAF1-203ENST00000359972 SMC4Q9NTJ3 1288 aa18.68■□□□□ 0.58
APAF1-203ENST00000359972 LMOD2Q6P5Q4 547 aa18.68■□□□□ 0.58
APAF1-203ENST00000359972 ARGLU1Q9NWB6 273 aaPredicted RBP18.68■□□□□ 0.58
APAF1-203ENST00000359972 DCAF11Q8TEB1 546 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms