RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 MAGI3Q5TCQ9 1506 aa10.89□□□□□ -0.67
CCDC196-201ENST00000359454 GOLGA3Q08378 1498 aa10.89□□□□□ -0.67
CCDC196-201ENST00000359454 CD109Q6YHK3 1445 aa10.89□□□□□ -0.67
CCDC196-201ENST00000359454 VASPP50552 380 aaPredicted RBP10.88□□□□□ -0.67
CCDC196-201ENST00000359454 CFAP43Q8NDM7 1665 aa10.88□□□□□ -0.67
CCDC196-201ENST00000359454 KCNH8Q96L42 1107 aa10.87□□□□□ -0.67
CCDC196-201ENST00000359454 STAG3Q9UJ98 1225 aa10.87□□□□□ -0.67
CCDC196-201ENST00000359454 ABCA8O94911 1581 aa10.86□□□□□ -0.67
CCDC196-201ENST00000359454 CTTNBP2Q8WZ74 1663 aa10.86□□□□□ -0.67
CCDC196-201ENST00000359454 FAM9AQ8IZU1 332 aaPredicted RBP10.84□□□□□ -0.67
CCDC196-201ENST00000359454 ARAP3Q8WWN8 1544 aa10.81□□□□□ -0.68
CCDC196-201ENST00000359454 REM2Q8IYK8 340 aaPredicted RBP10.81□□□□□ -0.68
CCDC196-201ENST00000359454 PRXQ9BXM0 1461 aa10.81□□□□□ -0.68
CCDC196-201ENST00000359454 PHLDB1Q86UU1 1377 aa10.8□□□□□ -0.68
CCDC196-201ENST00000359454 SPDYE1Q8NFV5 336 aaPredicted RBP10.8□□□□□ -0.68
CCDC196-201ENST00000359454 KIF21BO75037 1637 aa10.8□□□□□ -0.68
CCDC196-201ENST00000359454 ATP10BO94823 1461 aa10.78□□□□□ -0.68
CCDC196-201ENST00000359454 ARID3CA6NKF2 412 aa10.76□□□□□ -0.69
CCDC196-201ENST00000359454 AMER1Q5JTC6 1135 aaPredicted RBP10.76□□□□□ -0.69
CCDC196-201ENST00000359454 CLEC11AQ9Y240 323 aa10.76□□□□□ -0.69
CCDC196-201ENST00000359454 ABCA9Q8IUA7 1624 aa10.76□□□□□ -0.69
CCDC196-201ENST00000359454 P3H3Q8IVL6 736 aa10.75□□□□□ -0.69
CCDC196-201ENST00000359454 FBXO41Q8TF61 875 aa10.75□□□□□ -0.69
CCDC196-201ENST00000359454 PTPRMP28827 1452 aa10.74□□□□□ -0.69
CCDC196-201ENST00000359454 NEO1Q92859 1461 aa10.74□□□□□ -0.69
CCDC196-201ENST00000359454 PLCD3Q8N3E9 789 aa10.74□□□□□ -0.69
CCDC196-201ENST00000359454 ADAMTSL3P82987 1691 aa10.73□□□□□ -0.69
CCDC196-201ENST00000359454 RAPGEF3O95398 923 aa10.73□□□□□ -0.69
CCDC196-201ENST00000359454 IFNLR1Q8IU57 520 aaPredicted RBP10.72□□□□□ -0.69
CCDC196-201ENST00000359454 RTN4Q9NQC3 1192 aaKnown RBP10.72□□□□□ -0.69
CCDC196-201ENST00000359454 SAMD9Q5K651 1589 aa10.71□□□□□ -0.69
CCDC196-201ENST00000359454 MIER1Q8N108 512 aa10.71□□□□□ -0.69
CCDC196-201ENST00000359454 RAPGEF6Q8TEU7 1601 aa10.71□□□□□ -0.69
CCDC196-201ENST00000359454 ARID4BQ4LE39 1312 aaPredicted RBP10.7□□□□□ -0.7
CCDC196-201ENST00000359454 PITPNM1O00562 1244 aa10.69□□□□□ -0.7
CCDC196-201ENST00000359454 BCORL1Q5H9F3 1711 aa10.69□□□□□ -0.7
CCDC196-201ENST00000359454 FRMPD1Q5SYB0 1578 aa10.69□□□□□ -0.7
CCDC196-201ENST00000359454 PLEKHG5O94827 1062 aa10.68□□□□□ -0.7
CCDC196-201ENST00000359454 PRR29P0C7W0 189 aa10.68□□□□□ -0.7
CCDC196-201ENST00000359454 MADDQ8WXG6 1647 aa10.67□□□□□ -0.7
CCDC196-201ENST00000359454 KLHL34Q8N239 644 aa10.67□□□□□ -0.7
CCDC196-201ENST00000359454 PCF11O94913 1555 aaKnown RBP10.67□□□□□ -0.7
CCDC196-201ENST00000359454 NUP153P49790 1475 aaKnown RBP10.67□□□□□ -0.7
CCDC196-201ENST00000359454 PLEKHD1A6NEE1 506 aa10.66□□□□□ -0.7
CCDC196-201ENST00000359454 DENND4BO75064 1496 aaPredicted RBP10.66□□□□□ -0.7
CCDC196-201ENST00000359454 ARHGEF40Q8TER5 1519 aa10.65□□□□□ -0.7
CCDC196-201ENST00000359454 LMTK3Q96Q04 1460 aa10.65□□□□□ -0.7
CCDC196-201ENST00000359454 AKNAQ7Z591 1439 aa10.65□□□□□ -0.7
CCDC196-201ENST00000359454 FHOD3Q2V2M9 1422 aa10.64□□□□□ -0.71
CCDC196-201ENST00000359454 CFAP74Q9C0B2 1584 aa10.64□□□□□ -0.71
CCDC196-201ENST00000359454 POGZQ7Z3K3 1410 aa10.63□□□□□ -0.71
CCDC196-201ENST00000359454 RICTORQ6R327 1708 aa10.63□□□□□ -0.71
CCDC196-201ENST00000359454 RIMS1Q86UR5 1692 aaKnown RBP10.63□□□□□ -0.71
CCDC196-201ENST00000359454 FANCAO15360 1455 aa10.62□□□□□ -0.71
CCDC196-201ENST00000359454 EEA1Q15075 1411 aa10.62□□□□□ -0.71
CCDC196-201ENST00000359454 RANGAP1P46060 587 aaPredicted RBP10.62□□□□□ -0.71
CCDC196-201ENST00000359454 ZMYM4Q5VZL5 1548 aa10.61□□□□□ -0.71
CCDC196-201ENST00000359454 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.61□□□□□ -0.71
CCDC196-201ENST00000359454 MAGI2Q86UL8 1455 aa10.61□□□□□ -0.71
CCDC196-201ENST00000359454 EFCAB5A4FU69 1503 aa10.6□□□□□ -0.71
CCDC196-201ENST00000359454 SPOCK2Q92563 424 aa10.6□□□□□ -0.71
CCDC196-201ENST00000359454 ZBTB47Q9UFB7 747 aaPredicted RBP10.6□□□□□ -0.71
CCDC196-201ENST00000359454 ZFYVE16Q7Z3T8 1539 aa10.59□□□□□ -0.71
CCDC196-201ENST00000359454 HSPA2P54652 639 aa10.59□□□□□ -0.71
CCDC196-201ENST00000359454 YEATS2Q9ULM3 1422 aa10.58□□□□□ -0.72
CCDC196-201ENST00000359454 TTC37Q6PGP7 1564 aa10.57□□□□□ -0.72
CCDC196-201ENST00000359454 HECW1Q76N89 1606 aa10.56□□□□□ -0.72
CCDC196-201ENST00000359454 CREBZFQ9NS37 354 aa10.56□□□□□ -0.72
CCDC196-201ENST00000359454 PLCH2O75038 1416 aa10.56□□□□□ -0.72
CCDC196-201ENST00000359454 SCAPERQ9BY12 1400 aa10.56□□□□□ -0.72
CCDC196-201ENST00000359454 MLECQ14165 292 aa10.55□□□□□ -0.72
CCDC196-201ENST00000359454 CERKQ8TCT0 537 aa10.55□□□□□ -0.72
CCDC196-201ENST00000359454 SIGLEC1Q9BZZ2 1709 aa10.54□□□□□ -0.72
CCDC196-201ENST00000359454 ATP10AO60312 1499 aa10.54□□□□□ -0.72
CCDC196-201ENST00000359454 CDK13Q14004 1512 aaKnown RBP10.53□□□□□ -0.72
CCDC196-201ENST00000359454 FER1L4A9Z1Z3 1794 aa10.53□□□□□ -0.72
CCDC196-201ENST00000359454 EFCAB2Q5VUJ9 269 aa10.53□□□□□ -0.72
CCDC196-201ENST00000359454 ARHGEF12Q9NZN5 1544 aa10.53□□□□□ -0.72
CCDC196-201ENST00000359454 C9orf84Q5VXU9 1444 aa10.52□□□□□ -0.73
CCDC196-201ENST00000359454 CDK11AQ9UQ88 783 aaPredicted RBP10.51□□□□□ -0.73
CCDC196-201ENST00000359454 CHRDL2Q6WN34 429 aa10.5□□□□□ -0.73
CCDC196-201ENST00000359454 ATP1B4Q9UN42 357 aaPredicted RBP10.5□□□□□ -0.73
CCDC196-201ENST00000359454 FMN1Q68DA7 1419 aa10.5□□□□□ -0.73
CCDC196-201ENST00000359454 PREX1Q8TCU6 1659 aa10.49□□□□□ -0.73
CCDC196-201ENST00000359454 MYO5CQ9NQX4 1742 aa10.49□□□□□ -0.73
CCDC196-201ENST00000359454 ZNF518AQ6AHZ1 1483 aa10.49□□□□□ -0.73
CCDC196-201ENST00000359454 CEBPAP49715 358 aaPredicted RBP10.48□□□□□ -0.73
CCDC196-201ENST00000359454 UBTFP17480 764 aaKnown RBP10.47□□□□□ -0.73
CCDC196-201ENST00000359454 CHADLQ6NUI6 762 aa10.46□□□□□ -0.73
CCDC196-201ENST00000359454 MYT1LQ9UL68 1186 aa10.46□□□□□ -0.73
CCDC196-201ENST00000359454 CLIP1P30622 1438 aa10.46□□□□□ -0.74
CCDC196-201ENST00000359454 TROQ12816 1431 aaPredicted RBP10.46□□□□□ -0.74
CCDC196-201ENST00000359454 UHRF1BP1Q6BDS2 1440 aa10.46□□□□□ -0.74
CCDC196-201ENST00000359454 ARHGAP5Q13017 1502 aa10.46□□□□□ -0.74
CCDC196-201ENST00000359454 KDM5CP41229 1560 aa10.46□□□□□ -0.74
CCDC196-201ENST00000359454 KIF14Q15058 1648 aa10.46□□□□□ -0.74
CCDC196-201ENST00000359454 MNX1P50219 401 aaPredicted RBP10.45□□□□□ -0.74
CCDC196-201ENST00000359454 AFAP1Q8N556 730 aa10.45□□□□□ -0.74
CCDC196-201ENST00000359454 REREQ9P2R6 1566 aa10.44□□□□□ -0.74
CCDC196-201ENST00000359454 ARHGAP35Q9NRY4 1499 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms