RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 GTF3C3Q9Y5Q9 886 aa18.47■□□□□ 0.55
GGPS1-202ENST00000358966 CAMSAP2Q08AD1 1489 aa18.47■□□□□ 0.55
GGPS1-202ENST00000358966 ABCC5O15440 1437 aa18.47■□□□□ 0.55
GGPS1-202ENST00000358966 DAPK1P53355 1430 aa18.47■□□□□ 0.55
GGPS1-202ENST00000358966 ADCY10Q96PN6 1610 aa18.47■□□□□ 0.55
GGPS1-202ENST00000358966 CLSPNQ9HAW4 1339 aa18.46■□□□□ 0.54
GGPS1-202ENST00000358966 CDC42BPAQ5VT25 1732 aa18.45■□□□□ 0.54
GGPS1-202ENST00000358966 ABCC2Q92887 1545 aa18.45■□□□□ 0.54
GGPS1-202ENST00000358966 ABCC10Q5T3U5 1492 aa18.45■□□□□ 0.54
GGPS1-202ENST00000358966 ITSN2Q9NZM3 1697 aa18.42■□□□□ 0.54
GGPS1-202ENST00000358966 DNMT1P26358 1616 aaKnown RBP18.42■□□□□ 0.54
GGPS1-202ENST00000358966 TRIM52Q96A61 297 aa18.42■□□□□ 0.54
GGPS1-202ENST00000358966 OSCARQ8IYS5 282 aa18.4■□□□□ 0.54
GGPS1-202ENST00000358966 HNRNPMP52272 730 aaKnown RBP eCLIP18.39■□□□□ 0.53
GGPS1-202ENST00000358966 TTC37Q6PGP7 1564 aa18.39■□□□□ 0.53
GGPS1-202ENST00000358966 FOXD1Q16676 465 aa18.38■□□□□ 0.53
GGPS1-202ENST00000358966 ZCCHC11Q5TAX3 1644 aaKnown RBP18.38■□□□□ 0.53
GGPS1-202ENST00000358966 CENPBP07199 599 aaPredicted RBP18.37■□□□□ 0.53
GGPS1-202ENST00000358966 GCC2Q8IWJ2 1684 aa18.37■□□□□ 0.53
GGPS1-202ENST00000358966 ZNF316A6NFI3 1004 aaPredicted RBP18.37■□□□□ 0.53
GGPS1-202ENST00000358966 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.34■□□□□ 0.53
GGPS1-202ENST00000358966 CDC42BPBQ9Y5S2 1711 aa18.34■□□□□ 0.53
GGPS1-202ENST00000358966 AKNAQ7Z591 1439 aa18.33■□□□□ 0.53
GGPS1-202ENST00000358966 DIEXFQ68CQ4 756 aaKnown RBP18.33■□□□□ 0.53
GGPS1-202ENST00000358966 DENND4BO75064 1496 aaPredicted RBP18.33■□□□□ 0.52
GGPS1-202ENST00000358966 KDM5BQ9UGL1 1544 aa18.3■□□□□ 0.52
GGPS1-202ENST00000358966 SAMD9LQ8IVG5 1584 aa18.3■□□□□ 0.52
GGPS1-202ENST00000358966 NCOA1Q15788 1441 aa18.29■□□□□ 0.52
GGPS1-202ENST00000358966 ARHGAP5Q13017 1502 aa18.29■□□□□ 0.52
GGPS1-202ENST00000358966 PREX2Q70Z35 1606 aa18.29■□□□□ 0.52
GGPS1-202ENST00000358966 ROCK1Q13464 1354 aa18.28■□□□□ 0.52
GGPS1-202ENST00000358966 CROCC2H7BZ55 1655 aa18.28■□□□□ 0.52
GGPS1-202ENST00000358966 UHRF1BP1LA0JNW5 1464 aa18.27■□□□□ 0.52
GGPS1-202ENST00000358966 MPHOSPH9Q99550 1183 aa18.27■□□□□ 0.52
GGPS1-202ENST00000358966 C9orf84Q5VXU9 1444 aa18.26■□□□□ 0.51
GGPS1-202ENST00000358966 SYCP2Q9BX26 1530 aa18.26■□□□□ 0.51
GGPS1-202ENST00000358966 MBD5Q9P267 1494 aa18.25■□□□□ 0.51
GGPS1-202ENST00000358966 ADGBQ8N7X0 1667 aa18.23■□□□□ 0.51
GGPS1-202ENST00000358966 TSPY4P0CV99 314 aa18.23■□□□□ 0.51
GGPS1-202ENST00000358966 TSPY10P0CW01 314 aa18.23■□□□□ 0.51
GGPS1-202ENST00000358966 MYO5CQ9NQX4 1742 aa18.23■□□□□ 0.51
GGPS1-202ENST00000358966 ANKRD30AQ9BXX3 1397 aa18.22■□□□□ 0.51
GGPS1-202ENST00000358966 HIRIP3Q9BW71 556 aaPredicted RBP18.22■□□□□ 0.51
GGPS1-202ENST00000358966 SLC4A1APQ9BWU0 796 aaKnown RBP18.22■□□□□ 0.51
GGPS1-202ENST00000358966 ARHGEF12Q9NZN5 1544 aa18.2■□□□□ 0.5
GGPS1-202ENST00000358966 TONSLQ96HA7 1378 aa18.2■□□□□ 0.5
GGPS1-202ENST00000358966 ADGRL2O95490 1459 aa18.2■□□□□ 0.5
GGPS1-202ENST00000358966 ANKRD50Q9ULJ7 1429 aa18.19■□□□□ 0.5
GGPS1-202ENST00000358966 KIF15Q9NS87 1388 aa18.18■□□□□ 0.5
GGPS1-202ENST00000358966 CCDC141Q6ZP82 1450 aa18.18■□□□□ 0.5
GGPS1-202ENST00000358966 WDR7Q9Y4E6 1490 aa18.18■□□□□ 0.5
GGPS1-202ENST00000358966 ERICH6Q7L0X2 663 aa18.18■□□□□ 0.5
GGPS1-202ENST00000358966 ASXL2Q76L83 1435 aa18.17■□□□□ 0.5
GGPS1-202ENST00000358966 PLCH2O75038 1416 aa18.16■□□□□ 0.5
GGPS1-202ENST00000358966 PPP1R15AO75807 674 aaPredicted RBP18.15■□□□□ 0.5
GGPS1-202ENST00000358966 PZPP20742 1482 aa18.15■□□□□ 0.5
GGPS1-202ENST00000358966 ARHGEF5Q12774 1597 aa18.15■□□□□ 0.5
GGPS1-202ENST00000358966 SHANK2Q9UPX8 1470 aa18.14■□□□□ 0.5
GGPS1-202ENST00000358966 AFAP1Q8N556 730 aa18.13■□□□□ 0.49
GGPS1-202ENST00000358966 EFCAB2Q5VUJ9 269 aa18.13■□□□□ 0.49
GGPS1-202ENST00000358966 CYB5RLQ6IPT4 315 aa18.13■□□□□ 0.49
GGPS1-202ENST00000358966 TRAPPC8Q9Y2L5 1435 aa18.12■□□□□ 0.49
GGPS1-202ENST00000358966 NUP155O75694 1391 aa18.11■□□□□ 0.49
GGPS1-202ENST00000358966 PKD2Q13563 968 aa18.11■□□□□ 0.49
GGPS1-202ENST00000358966 NPM1P06748 294 aaKnown RBP eCLIP18.1■□□□□ 0.49
GGPS1-202ENST00000358966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.09■□□□□ 0.49
GGPS1-202ENST00000358966 ANKRD30BQ9BXX2 1392 aa18.09■□□□□ 0.49
GGPS1-202ENST00000358966 MIER1Q8N108 512 aa18.08■□□□□ 0.49
GGPS1-202ENST00000358966 ABCC1P33527 1531 aa18.07■□□□□ 0.48
GGPS1-202ENST00000358966 L3MBTL2Q969R5 705 aa18.07■□□□□ 0.48
GGPS1-202ENST00000358966 FANCAO15360 1455 aa18.06■□□□□ 0.48
GGPS1-202ENST00000358966 KIAA1107Q9UPP5 1409 aa18.06■□□□□ 0.48
GGPS1-202ENST00000358966 TIMELESSQ9UNS1 1208 aa18.05■□□□□ 0.48
GGPS1-202ENST00000358966 PLEKHH2Q8IVE3 1493 aa18.04■□□□□ 0.48
GGPS1-202ENST00000358966 RSPH4AQ5TD94 716 aa18.03■□□□□ 0.48
GGPS1-202ENST00000358966 ABCA9Q8IUA7 1624 aa18.03■□□□□ 0.48
GGPS1-202ENST00000358966 MYT1LQ9UL68 1186 aa18.03■□□□□ 0.48
GGPS1-202ENST00000358966 ANP32EQ9BTT0 268 aa18.02■□□□□ 0.48
GGPS1-202ENST00000358966 RPRD2Q5VT52 1461 aaKnown RBP18■□□□□ 0.47
GGPS1-202ENST00000358966 SPAG9O60271 1321 aaKnown RBP18■□□□□ 0.47
GGPS1-202ENST00000358966 ADGRL1O94910 1474 aa17.99■□□□□ 0.47
GGPS1-202ENST00000358966 SCAPERQ9BY12 1400 aa17.98■□□□□ 0.47
GGPS1-202ENST00000358966 MAST1Q9Y2H9 1570 aa17.98■□□□□ 0.47
GGPS1-202ENST00000358966 RIMBP3CA6NJZ7 1639 aa17.98■□□□□ 0.47
GGPS1-202ENST00000358966 RIMBP3BA6NNM3 1639 aa17.98■□□□□ 0.47
GGPS1-202ENST00000358966 RIMBP3Q9UFD9 1639 aa17.98■□□□□ 0.47
GGPS1-202ENST00000358966 ZNF326Q5BKZ1 582 aaKnown RBP17.98■□□□□ 0.47
GGPS1-202ENST00000358966 NBPF8Q3BBV2 869 aa17.97■□□□□ 0.47
GGPS1-202ENST00000358966 TEX14Q8IWB6 1497 aa17.97■□□□□ 0.47
GGPS1-202ENST00000358966 FAM135AQ9P2D6 1515 aa17.96■□□□□ 0.47
GGPS1-202ENST00000358966 YTHDC1Q96MU7 727 aaKnown RBP17.96■□□□□ 0.47
GGPS1-202ENST00000358966 PLXNC1O60486 1568 aa17.95■□□□□ 0.46
GGPS1-202ENST00000358966 CD109Q6YHK3 1445 aa17.95■□□□□ 0.46
GGPS1-202ENST00000358966 DDX10Q13206 875 aaKnown RBP17.95■□□□□ 0.46
GGPS1-202ENST00000358966 ZFYVE16Q7Z3T8 1539 aa17.95■□□□□ 0.46
GGPS1-202ENST00000358966 ARAP3Q8WWN8 1544 aa17.94■□□□□ 0.46
GGPS1-202ENST00000358966 KDM5DQ9BY66 1539 aa17.92■□□□□ 0.46
GGPS1-202ENST00000358966 DUOX2Q9NRD8 1548 aa17.92■□□□□ 0.46
GGPS1-202ENST00000358966 ATP7AQ04656 1500 aa17.89■□□□□ 0.45
GGPS1-202ENST00000358966 RAPGEF3O95398 923 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms