RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 DNMT1P26358 1616 aaKnown RBP17.71■□□□□ 0.42
SYN3-202ENST00000358763 NAIPQ13075 1403 aa17.71■□□□□ 0.42
SYN3-202ENST00000358763 TTC37Q6PGP7 1564 aa17.7■□□□□ 0.42
SYN3-202ENST00000358763 ABCC5O15440 1437 aa17.69■□□□□ 0.42
SYN3-202ENST00000358763 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.68■□□□□ 0.42
SYN3-202ENST00000358763 PREX2Q70Z35 1606 aa17.65■□□□□ 0.42
SYN3-202ENST00000358763 CDC42BPBQ9Y5S2 1711 aa17.65■□□□□ 0.42
SYN3-202ENST00000358763 GCC2Q8IWJ2 1684 aa17.65■□□□□ 0.42
SYN3-202ENST00000358763 CLSPNQ9HAW4 1339 aa17.64■□□□□ 0.41
SYN3-202ENST00000358763 MAPKBP1O60336 1514 aa17.64■□□□□ 0.41
SYN3-202ENST00000358763 AKNAQ7Z591 1439 aa17.62■□□□□ 0.41
SYN3-202ENST00000358763 KDM6BO15054 1643 aa17.62■□□□□ 0.41
SYN3-202ENST00000358763 ARHGAP5Q13017 1502 aa17.62■□□□□ 0.41
SYN3-202ENST00000358763 MYO5CQ9NQX4 1742 aa17.61■□□□□ 0.41
SYN3-202ENST00000358763 SAMD9LQ8IVG5 1584 aa17.61■□□□□ 0.41
SYN3-202ENST00000358763 CROCC2H7BZ55 1655 aa17.61■□□□□ 0.41
SYN3-202ENST00000358763 WDR7Q9Y4E6 1490 aa17.6■□□□□ 0.41
SYN3-202ENST00000358763 ROCK1Q13464 1354 aa17.59■□□□□ 0.41
SYN3-202ENST00000358763 HNRNPMP52272 730 aaKnown RBP eCLIP17.59■□□□□ 0.411e-6■■■■■ 30.1
SYN3-202ENST00000358763 ASXL2Q76L83 1435 aa17.57■□□□□ 0.4
SYN3-202ENST00000358763 ADGBQ8N7X0 1667 aa17.57■□□□□ 0.4
SYN3-202ENST00000358763 SYCP2Q9BX26 1530 aa17.55■□□□□ 0.4
SYN3-202ENST00000358763 NPM1P06748 294 aaKnown RBP eCLIP17.55■□□□□ 0.4
SYN3-202ENST00000358763 MBD5Q9P267 1494 aa17.55■□□□□ 0.4
SYN3-202ENST00000358763 NCOA1Q15788 1441 aa17.54■□□□□ 0.4
SYN3-202ENST00000358763 C9orf84Q5VXU9 1444 aa17.54■□□□□ 0.4
SYN3-202ENST00000358763 TRIM52Q96A61 297 aa17.54■□□□□ 0.4
SYN3-202ENST00000358763 PLCH2O75038 1416 aa17.54■□□□□ 0.4
SYN3-202ENST00000358763 ARHGEF5Q12774 1597 aa17.53■□□□□ 0.4
SYN3-202ENST00000358763 ADGRL2O95490 1459 aa17.53■□□□□ 0.4
SYN3-202ENST00000358763 CCDC141Q6ZP82 1450 aa17.52■□□□□ 0.39
SYN3-202ENST00000358763 SHANK2Q9UPX8 1470 aa17.52■□□□□ 0.39
SYN3-202ENST00000358763 ANKRD30AQ9BXX3 1397 aa17.51■□□□□ 0.39
SYN3-202ENST00000358763 TSPY4P0CV99 314 aa17.51■□□□□ 0.39
SYN3-202ENST00000358763 TSPY10P0CW01 314 aa17.51■□□□□ 0.39
SYN3-202ENST00000358763 SIN3AQ96ST3 1273 aa17.51■□□□□ 0.39
SYN3-202ENST00000358763 RIMBP3CA6NJZ7 1639 aa17.51■□□□□ 0.39
SYN3-202ENST00000358763 RIMBP3BA6NNM3 1639 aa17.51■□□□□ 0.39
SYN3-202ENST00000358763 RIMBP3Q9UFD9 1639 aa17.51■□□□□ 0.39
SYN3-202ENST00000358763 CYB5RLQ6IPT4 315 aa17.5■□□□□ 0.39
SYN3-202ENST00000358763 NEUROD1Q13562 356 aa17.49■□□□□ 0.39
SYN3-202ENST00000358763 EFCAB2Q5VUJ9 269 aa17.49■□□□□ 0.39
SYN3-202ENST00000358763 ABCA9Q8IUA7 1624 aa17.48■□□□□ 0.39
SYN3-202ENST00000358763 ARHGEF12Q9NZN5 1544 aa17.48■□□□□ 0.39
SYN3-202ENST00000358763 PLEKHH2Q8IVE3 1493 aa17.46■□□□□ 0.39
SYN3-202ENST00000358763 ABCC1P33527 1531 aa17.45■□□□□ 0.38
SYN3-202ENST00000358763 KIAA1107Q9UPP5 1409 aa17.45■□□□□ 0.38
SYN3-202ENST00000358763 DENND4BO75064 1496 aaPredicted RBP17.45■□□□□ 0.38
SYN3-202ENST00000358763 KIF15Q9NS87 1388 aa17.44■□□□□ 0.38
SYN3-202ENST00000358763 ANKRD50Q9ULJ7 1429 aa17.44■□□□□ 0.38
SYN3-202ENST00000358763 RSPH4AQ5TD94 716 aa17.44■□□□□ 0.38
SYN3-202ENST00000358763 ARAP3Q8WWN8 1544 aa17.43■□□□□ 0.38
SYN3-202ENST00000358763 MPHOSPH9Q99550 1183 aa17.43■□□□□ 0.38
SYN3-202ENST00000358763 FANCAO15360 1455 aa17.43■□□□□ 0.38
SYN3-202ENST00000358763 TRAPPC8Q9Y2L5 1435 aa17.41■□□□□ 0.38
SYN3-202ENST00000358763 FOXD1Q16676 465 aa17.41■□□□□ 0.38
SYN3-202ENST00000358763 MAST1Q9Y2H9 1570 aa17.4■□□□□ 0.38
SYN3-202ENST00000358763 SLC4A1APQ9BWU0 796 aaKnown RBP17.38■□□□□ 0.37
SYN3-202ENST00000358763 PZPP20742 1482 aa17.37■□□□□ 0.37
SYN3-202ENST00000358763 AFAP1Q8N556 730 aa17.36■□□□□ 0.37
SYN3-202ENST00000358763 CD109Q6YHK3 1445 aa17.36■□□□□ 0.37
SYN3-202ENST00000358763 ADGRL1O94910 1474 aa17.36■□□□□ 0.37
SYN3-202ENST00000358763 ACIN1Q9UKV3 1341 aaKnown RBP17.35■□□□□ 0.37
SYN3-202ENST00000358763 PLXNC1O60486 1568 aa17.35■□□□□ 0.37
SYN3-202ENST00000358763 SCAPERQ9BY12 1400 aa17.34■□□□□ 0.37
SYN3-202ENST00000358763 ZNF316A6NFI3 1004 aaPredicted RBP17.33■□□□□ 0.37
SYN3-202ENST00000358763 TONSLQ96HA7 1378 aa17.33■□□□□ 0.36
SYN3-202ENST00000358763 NUP155O75694 1391 aa17.33■□□□□ 0.36
SYN3-202ENST00000358763 SPAG9O60271 1321 aaKnown RBP17.33■□□□□ 0.36
SYN3-202ENST00000358763 ZFYVE16Q7Z3T8 1539 aa17.3■□□□□ 0.36
SYN3-202ENST00000358763 TIMELESSQ9UNS1 1208 aa17.29■□□□□ 0.36
SYN3-202ENST00000358763 ANKRD30BQ9BXX2 1392 aa17.29■□□□□ 0.36
SYN3-202ENST00000358763 DUOX2Q9NRD8 1548 aa17.28■□□□□ 0.36
SYN3-202ENST00000358763 PKD2Q13563 968 aa17.28■□□□□ 0.36
SYN3-202ENST00000358763 MYT1LQ9UL68 1186 aa17.28■□□□□ 0.36
SYN3-202ENST00000358763 KDM5DQ9BY66 1539 aa17.27■□□□□ 0.35
SYN3-202ENST00000358763 CFAP74Q9C0B2 1584 aa17.26■□□□□ 0.35
SYN3-202ENST00000358763 ATP7AQ04656 1500 aa17.26■□□□□ 0.35
SYN3-202ENST00000358763 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.26■□□□□ 0.35
SYN3-202ENST00000358763 INO80Q9ULG1 1556 aaPredicted RBP17.26■□□□□ 0.35
SYN3-202ENST00000358763 RTEL1-TNFRSF6BF6WH68 1400 aa17.26■□□□□ 0.35
SYN3-202ENST00000358763 PPP1R15AO75807 674 aaPredicted RBP17.25■□□□□ 0.35
SYN3-202ENST00000358763 ERBINQ96RT1 1412 aa17.25■□□□□ 0.35
SYN3-202ENST00000358763 UNC13BO14795 1591 aa17.24■□□□□ 0.35
SYN3-202ENST00000358763 DNAJC5Q9H3Z4 198 aa17.23■□□□□ 0.35
SYN3-202ENST00000358763 FAM135AQ9P2D6 1515 aa17.23■□□□□ 0.35
SYN3-202ENST00000358763 MAP3K4Q9Y6R4 1608 aa17.23■□□□□ 0.35
SYN3-202ENST00000358763 ZNF518AQ6AHZ1 1483 aa17.22■□□□□ 0.35
SYN3-202ENST00000358763 FAM69CQ0P6D2 419 aa17.22■□□□□ 0.35
SYN3-202ENST00000358763 DIP2BQ9P265 1576 aa17.21■□□□□ 0.35
SYN3-202ENST00000358763 RPRD2Q5VT52 1461 aaKnown RBP17.21■□□□□ 0.35
SYN3-202ENST00000358763 POGZQ7Z3K3 1410 aa17.21■□□□□ 0.35
SYN3-202ENST00000358763 GLI2P10070 1586 aa17.2■□□□□ 0.34
SYN3-202ENST00000358763 DIEXFQ68CQ4 756 aaKnown RBP17.2■□□□□ 0.34
SYN3-202ENST00000358763 NEO1Q92859 1461 aa17.19■□□□□ 0.34
SYN3-202ENST00000358763 KIDINS220Q9ULH0 1771 aa17.19■□□□□ 0.34
SYN3-202ENST00000358763 L3MBTL2Q969R5 705 aa17.18■□□□□ 0.34
SYN3-202ENST00000358763 IQGAP3Q86VI3 1631 aa17.17■□□□□ 0.34
SYN3-202ENST00000358763 RAPGEF3O95398 923 aa17.17■□□□□ 0.34
SYN3-202ENST00000358763 MAGI2Q86UL8 1455 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms