RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 MAGI2Q86UL8 1455 aa13.61□□□□□ -0.23
SMARCAL1-202ENST00000358207 FHOD3Q2V2M9 1422 aa13.6□□□□□ -0.23
SMARCAL1-202ENST00000358207 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.6□□□□□ -0.23
SMARCAL1-202ENST00000358207 ZNF316A6NFI3 1004 aaPredicted RBP13.59□□□□□ -0.23
SMARCAL1-202ENST00000358207 KDM4FA0A1W2PPD8 638 aa13.59□□□□□ -0.23
SMARCAL1-202ENST00000358207 TTC37Q6PGP7 1564 aa13.59□□□□□ -0.23
SMARCAL1-202ENST00000358207 CCDC136Q96JN2 1154 aa13.58□□□□□ -0.23
SMARCAL1-202ENST00000358207 SLC24A1O60721 1099 aa13.58□□□□□ -0.24
SMARCAL1-202ENST00000358207 MSH5O43196 834 aa13.57□□□□□ -0.24
SMARCAL1-202ENST00000358207 KDM5CP41229 1560 aa13.57□□□□□ -0.24
SMARCAL1-202ENST00000358207 CLSPNQ9HAW4 1339 aa13.56□□□□□ -0.24
SMARCAL1-202ENST00000358207 PREX2Q70Z35 1606 aa13.55□□□□□ -0.24
SMARCAL1-202ENST00000358207 AEBP2Q6ZN18 517 aaPredicted RBP13.55□□□□□ -0.24
SMARCAL1-202ENST00000358207 HECW2Q9P2P5 1572 aa13.54□□□□□ -0.24
SMARCAL1-202ENST00000358207 RBM19Q9Y4C8 960 aaKnown RBP13.53□□□□□ -0.24
SMARCAL1-202ENST00000358207 ITSN2Q9NZM3 1697 aa13.53□□□□□ -0.24
SMARCAL1-202ENST00000358207 KIF14Q15058 1648 aa13.53□□□□□ -0.24
SMARCAL1-202ENST00000358207 FMN1Q68DA7 1419 aa13.53□□□□□ -0.24
SMARCAL1-202ENST00000358207 SIGLEC1Q9BZZ2 1709 aa13.52□□□□□ -0.25
SMARCAL1-202ENST00000358207 CCDC18Q5T9S5 1454 aa13.51□□□□□ -0.25
SMARCAL1-202ENST00000358207 CDC42BPBQ9Y5S2 1711 aa13.5□□□□□ -0.25
SMARCAL1-202ENST00000358207 ARHGAP35Q9NRY4 1499 aa13.5□□□□□ -0.25
SMARCAL1-202ENST00000358207 EIF5BO60841 1220 aaKnown RBP13.5□□□□□ -0.25
SMARCAL1-202ENST00000358207 CEP162Q5TB80 1403 aa13.5□□□□□ -0.25
SMARCAL1-202ENST00000358207 P3H3Q8IVL6 736 aa13.49□□□□□ -0.25
SMARCAL1-202ENST00000358207 MROH2AA6NES4 1674 aa13.48□□□□□ -0.25
SMARCAL1-202ENST00000358207 ZFYVE16Q7Z3T8 1539 aa13.48□□□□□ -0.25
SMARCAL1-202ENST00000358207 ARHGEF12Q9NZN5 1544 aa13.48□□□□□ -0.25
SMARCAL1-202ENST00000358207 MADDQ8WXG6 1647 aa13.47□□□□□ -0.25
SMARCAL1-202ENST00000358207 FER1L4A9Z1Z3 1794 aa13.47□□□□□ -0.25
SMARCAL1-202ENST00000358207 PLCH2O75038 1416 aa13.47□□□□□ -0.25
SMARCAL1-202ENST00000358207 CDC42BPAQ5VT25 1732 aa13.47□□□□□ -0.25
SMARCAL1-202ENST00000358207 AGLP35573 1532 aa13.46□□□□□ -0.25
SMARCAL1-202ENST00000358207 DENND4BO75064 1496 aaPredicted RBP13.46□□□□□ -0.25
SMARCAL1-202ENST00000358207 DEKP35659 375 aaKnown RBP13.46□□□□□ -0.25
SMARCAL1-202ENST00000358207 POGZQ7Z3K3 1410 aa13.46□□□□□ -0.26
SMARCAL1-202ENST00000358207 FYCO1Q9BQS8 1478 aa13.45□□□□□ -0.26
SMARCAL1-202ENST00000358207 AKNAQ7Z591 1439 aa13.44□□□□□ -0.26
SMARCAL1-202ENST00000358207 FANCAO15360 1455 aa13.44□□□□□ -0.26
SMARCAL1-202ENST00000358207 PREX1Q8TCU6 1659 aa13.44□□□□□ -0.26
SMARCAL1-202ENST00000358207 CASKIN1Q8WXD9 1431 aa13.44□□□□□ -0.26
SMARCAL1-202ENST00000358207 ABCC1P33527 1531 aa13.44□□□□□ -0.26
SMARCAL1-202ENST00000358207 PCF11O94913 1555 aaKnown RBP13.44□□□□□ -0.26
SMARCAL1-202ENST00000358207 FAM135AQ9P2D6 1515 aa13.43□□□□□ -0.26
SMARCAL1-202ENST00000358207 ATP1B4Q9UN42 357 aaPredicted RBP13.43□□□□□ -0.26
SMARCAL1-202ENST00000358207 RIMS1Q86UR5 1692 aaKnown RBP13.42□□□□□ -0.26
SMARCAL1-202ENST00000358207 TROQ12816 1431 aaPredicted RBP13.42□□□□□ -0.26
SMARCAL1-202ENST00000358207 PTPRMP28827 1452 aa13.42□□□□□ -0.26
SMARCAL1-202ENST00000358207 DIP2CQ9Y2E4 1556 aa13.41□□□□□ -0.26
SMARCAL1-202ENST00000358207 CDK13Q14004 1512 aaKnown RBP13.41□□□□□ -0.26
SMARCAL1-202ENST00000358207 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
SMARCAL1-202ENST00000358207 MLH3Q9UHC1 1453 aa13.39□□□□□ -0.27
SMARCAL1-202ENST00000358207 BCANQ96GW7 911 aa13.39□□□□□ -0.27
SMARCAL1-202ENST00000358207 INO80Q9ULG1 1556 aaPredicted RBP13.38□□□□□ -0.27
SMARCAL1-202ENST00000358207 ABCA6Q8N139 1617 aa13.38□□□□□ -0.27
SMARCAL1-202ENST00000358207 CLIP1P30622 1438 aa13.38□□□□□ -0.27
SMARCAL1-202ENST00000358207 PLXNC1O60486 1568 aa13.37□□□□□ -0.27
SMARCAL1-202ENST00000358207 ZNF518AQ6AHZ1 1483 aa13.37□□□□□ -0.27
SMARCAL1-202ENST00000358207 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.37□□□□□ -0.27
SMARCAL1-202ENST00000358207 C9orf84Q5VXU9 1444 aa13.37□□□□□ -0.27
SMARCAL1-202ENST00000358207 KIDINS220Q9ULH0 1771 aa13.36□□□□□ -0.27
SMARCAL1-202ENST00000358207 ZNF142P52746 1687 aaPredicted RBP13.36□□□□□ -0.27
SMARCAL1-202ENST00000358207 ERICH6BQ5W0A0 696 aa13.35□□□□□ -0.27
SMARCAL1-202ENST00000358207 ADGBQ8N7X0 1667 aa13.35□□□□□ -0.27
SMARCAL1-202ENST00000358207 ATP10AO60312 1499 aa13.35□□□□□ -0.27
SMARCAL1-202ENST00000358207 LMTK3Q96Q04 1460 aa13.35□□□□□ -0.27
SMARCAL1-202ENST00000358207 ARID3CA6NKF2 412 aa13.31□□□□□ -0.28
SMARCAL1-202ENST00000358207 SAMD9LQ8IVG5 1584 aa13.31□□□□□ -0.28
SMARCAL1-202ENST00000358207 PKNOX2Q96KN3 472 aa13.31□□□□□ -0.28
SMARCAL1-202ENST00000358207 C3P01024 1663 aa13.31□□□□□ -0.28
SMARCAL1-202ENST00000358207 PLEKHH2Q8IVE3 1493 aa13.3□□□□□ -0.28
SMARCAL1-202ENST00000358207 MYT1LQ9UL68 1186 aa13.3□□□□□ -0.28
SMARCAL1-202ENST00000358207 EHBP1L1Q8N3D4 1523 aa13.29□□□□□ -0.28
SMARCAL1-202ENST00000358207 PLEKHD1A6NEE1 506 aa13.29□□□□□ -0.28
SMARCAL1-202ENST00000358207 MAP3K1Q13233 1512 aa13.29□□□□□ -0.28
SMARCAL1-202ENST00000358207 KIAA1107Q9UPP5 1409 aa13.29□□□□□ -0.28
SMARCAL1-202ENST00000358207 DAXXQ9UER7 740 aaPredicted RBP13.27□□□□□ -0.28
SMARCAL1-202ENST00000358207 ARHGAP5Q13017 1502 aa13.26□□□□□ -0.29
SMARCAL1-202ENST00000358207 MAST1Q9Y2H9 1570 aa13.26□□□□□ -0.29
SMARCAL1-202ENST00000358207 STRCQ7RTU9 1775 aa13.26□□□□□ -0.29
SMARCAL1-202ENST00000358207 IQSEC2Q5JU85 1478 aa13.25□□□□□ -0.29
SMARCAL1-202ENST00000358207 IL27Q8NEV9 243 aa13.25□□□□□ -0.29
SMARCAL1-202ENST00000358207 FANCIQ9NVI1 1328 aa13.25□□□□□ -0.29
SMARCAL1-202ENST00000358207 ARHGEF5Q12774 1597 aa13.25□□□□□ -0.29
SMARCAL1-202ENST00000358207 TIAM1Q13009 1591 aa13.25□□□□□ -0.29
SMARCAL1-202ENST00000358207 YEATS2Q9ULM3 1422 aa13.24□□□□□ -0.29
SMARCAL1-202ENST00000358207 SETD1BQ9UPS6 1966 aaKnown RBP13.24□□□□□ -0.29
SMARCAL1-202ENST00000358207 SCAPERQ9BY12 1400 aa13.24□□□□□ -0.29
SMARCAL1-202ENST00000358207 HNRNPUL2Q1KMD3 747 aaKnown RBP13.24□□□□□ -0.29
SMARCAL1-202ENST00000358207 FKBP8Q14318 412 aa13.23□□□□□ -0.29
SMARCAL1-202ENST00000358207 CNTLNQ9NXG0 1405 aa13.23□□□□□ -0.29
SMARCAL1-202ENST00000358207 KANK4Q5T7N3 995 aaPredicted RBP13.22□□□□□ -0.29
SMARCAL1-202ENST00000358207 RTN4Q9NQC3 1192 aaKnown RBP13.22□□□□□ -0.29
SMARCAL1-202ENST00000358207 CDK11AQ9UQ88 783 aaPredicted RBP13.22□□□□□ -0.29
SMARCAL1-202ENST00000358207 ZC3H13Q5T200 1668 aaKnown RBP13.22□□□□□ -0.29
SMARCAL1-202ENST00000358207 EIF2AK4Q9P2K8 1649 aaKnown RBP13.21□□□□□ -0.29
SMARCAL1-202ENST00000358207 NPATQ14207 1427 aa13.21□□□□□ -0.29
SMARCAL1-202ENST00000358207 KCNH8Q96L42 1107 aa13.21□□□□□ -0.29
SMARCAL1-202ENST00000358207 SUPT6HQ7KZ85 1726 aaKnown RBP13.21□□□□□ -0.3
SMARCAL1-202ENST00000358207 GPATCH8Q9UKJ3 1502 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms