RNA–Protein interactions for RNA: ENST00000357886.8

CDK5RAP1-203, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK5RAP1, Length 2,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-203ENST00000357886 ARID3CA6NKF2 412 aa18.71■□□□□ 0.59
CDK5RAP1-203ENST00000357886 KIAA0556O60303 1618 aa18.71■□□□□ 0.59
CDK5RAP1-203ENST00000357886 NCOA1Q15788 1441 aa18.71■□□□□ 0.59
CDK5RAP1-203ENST00000357886 RPRD2Q5VT52 1461 aaKnown RBP18.7■□□□□ 0.58
CDK5RAP1-203ENST00000357886 TEX14Q8IWB6 1497 aa18.7■□□□□ 0.58
CDK5RAP1-203ENST00000357886 C11orf95C9JLR9 678 aaPredicted RBP18.7■□□□□ 0.58
CDK5RAP1-203ENST00000357886 NUP153P49790 1475 aaKnown RBP18.7■□□□□ 0.58
CDK5RAP1-203ENST00000357886 HNRNPUQ00839 825 aaKnown RBP eCLIP18.69■□□□□ 0.58
CDK5RAP1-203ENST00000357886 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
CDK5RAP1-203ENST00000357886 KIAA0586Q9BVV6 1533 aa18.68■□□□□ 0.58
CDK5RAP1-203ENST00000357886 CCDC7Q96M83 1385 aa18.67■□□□□ 0.58
CDK5RAP1-203ENST00000357886 NBPF8Q3BBV2 869 aa18.67■□□□□ 0.58
CDK5RAP1-203ENST00000357886 ANP32EQ9BTT0 268 aa18.67■□□□□ 0.58
CDK5RAP1-203ENST00000357886 ZNF644Q9H582 1327 aaPredicted RBP18.66■□□□□ 0.58
CDK5RAP1-203ENST00000357886 CCDC184Q52MB2 194 aa18.66■□□□□ 0.58
CDK5RAP1-203ENST00000357886 RBM19Q9Y4C8 960 aaKnown RBP18.65■□□□□ 0.58
CDK5RAP1-203ENST00000357886 RAPGEF6Q8TEU7 1601 aa18.65■□□□□ 0.58
CDK5RAP1-203ENST00000357886 SPATA31E1Q6ZUB1 1445 aa18.65■□□□□ 0.58
CDK5RAP1-203ENST00000357886 ERCC6Q03468 1493 aa18.64■□□□□ 0.57
CDK5RAP1-203ENST00000357886 PRKRIP1Q9H875 184 aaPredicted RBP18.61■□□□□ 0.57
CDK5RAP1-203ENST00000357886 PZPP20742 1482 aa18.61■□□□□ 0.57
CDK5RAP1-203ENST00000357886 POLR1AO95602 1720 aaPredicted RBP18.59■□□□□ 0.57
CDK5RAP1-203ENST00000357886 GRIN2AQ12879 1464 aa18.59■□□□□ 0.57
CDK5RAP1-203ENST00000357886 KIF7Q2M1P5 1343 aa18.56■□□□□ 0.56
CDK5RAP1-203ENST00000357886 PRG4Q92954 1404 aaPredicted RBP18.56■□□□□ 0.56
CDK5RAP1-203ENST00000357886 CAMSAP2Q08AD1 1489 aa18.56■□□□□ 0.56
CDK5RAP1-203ENST00000357886 SLC4A1APQ9BWU0 796 aaKnown RBP18.56■□□□□ 0.56
CDK5RAP1-203ENST00000357886 TROQ12816 1431 aaPredicted RBP18.56■□□□□ 0.56
CDK5RAP1-203ENST00000357886 MBD5Q9P267 1494 aa18.56■□□□□ 0.56
CDK5RAP1-203ENST00000357886 EIF4G3O43432 1585 aaKnown RBP18.55■□□□□ 0.56
CDK5RAP1-203ENST00000357886 IRX6P78412 446 aaPredicted RBP18.54■□□□□ 0.56
CDK5RAP1-203ENST00000357886 ADGBQ8N7X0 1667 aa18.53■□□□□ 0.56
CDK5RAP1-203ENST00000357886 GPATCH8Q9UKJ3 1502 aaKnown RBP18.53■□□□□ 0.56
CDK5RAP1-203ENST00000357886 ADGRL2O95490 1459 aa18.53■□□□□ 0.56
CDK5RAP1-203ENST00000357886 CDK11AQ9UQ88 783 aaPredicted RBP18.52■□□□□ 0.56
CDK5RAP1-203ENST00000357886 ADCY10Q96PN6 1610 aa18.52■□□□□ 0.56
CDK5RAP1-203ENST00000357886 ITSN2Q9NZM3 1697 aa18.52■□□□□ 0.55
CDK5RAP1-203ENST00000357886 CROCC2H7BZ55 1655 aa18.51■□□□□ 0.55
CDK5RAP1-203ENST00000357886 KIF14Q15058 1648 aa18.51■□□□□ 0.55
CDK5RAP1-203ENST00000357886 PLB1Q6P1J6 1458 aa18.5■□□□□ 0.55
CDK5RAP1-203ENST00000357886 ERICH6BQ5W0A0 696 aa18.49■□□□□ 0.55
CDK5RAP1-203ENST00000357886 CEP170Q5SW79 1584 aa18.49■□□□□ 0.55
CDK5RAP1-203ENST00000357886 ZBED9Q6R2W3 1325 aa18.49■□□□□ 0.55
CDK5RAP1-203ENST00000357886 MRS2Q9HD23 443 aa18.49■□□□□ 0.55
CDK5RAP1-203ENST00000357886 KIAA1107Q9UPP5 1409 aa18.48■□□□□ 0.55
CDK5RAP1-203ENST00000357886 FAM9BQ8IZU0 186 aa18.48■□□□□ 0.55
CDK5RAP1-203ENST00000357886 CFDP1Q9UEE9 299 aaPredicted RBP18.47■□□□□ 0.55
CDK5RAP1-203ENST00000357886 BCORL1Q5H9F3 1711 aa18.47■□□□□ 0.55
CDK5RAP1-203ENST00000357886 DHX29Q7Z478 1369 aaKnown RBP18.47■□□□□ 0.55
CDK5RAP1-203ENST00000357886 MAGI1Q96QZ7 1491 aaPredicted RBP18.46■□□□□ 0.55
CDK5RAP1-203ENST00000357886 MSH5O43196 834 aa18.44■□□□□ 0.54
CDK5RAP1-203ENST00000357886 PPP4R2Q9NY27 417 aa18.42■□□□□ 0.54
CDK5RAP1-203ENST00000357886 KDM5CP41229 1560 aa18.42■□□□□ 0.54
CDK5RAP1-203ENST00000357886 USP47Q96K76 1375 aa18.42■□□□□ 0.54
CDK5RAP1-203ENST00000357886 SYNJ2O15056 1496 aa18.41■□□□□ 0.54
CDK5RAP1-203ENST00000357886 PKD2Q13563 968 aa18.4■□□□□ 0.54
CDK5RAP1-203ENST00000357886 ANKRD30AQ9BXX3 1397 aa18.4■□□□□ 0.54
CDK5RAP1-203ENST00000357886 CDC42BPAQ5VT25 1732 aa18.39■□□□□ 0.53
CDK5RAP1-203ENST00000357886 FANCIQ9NVI1 1328 aa18.39■□□□□ 0.53
CDK5RAP1-203ENST00000357886 UHRF1BP1Q6BDS2 1440 aa18.39■□□□□ 0.53
CDK5RAP1-203ENST00000357886 ANKRD50Q9ULJ7 1429 aa18.39■□□□□ 0.53
CDK5RAP1-203ENST00000357886 ABCC10Q5T3U5 1492 aa18.38■□□□□ 0.53
CDK5RAP1-203ENST00000357886 NUP160Q12769 1436 aa18.38■□□□□ 0.53
CDK5RAP1-203ENST00000357886 ZNF777Q9ULD5 760 aaPredicted RBP18.38■□□□□ 0.53
CDK5RAP1-203ENST00000357886 SHANK2Q9UPX8 1470 aa18.37■□□□□ 0.53
CDK5RAP1-203ENST00000357886 ABCA8O94911 1581 aa18.37■□□□□ 0.53
CDK5RAP1-203ENST00000357886 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
CDK5RAP1-203ENST00000357886 RALGAPBQ86X10 1494 aa18.36■□□□□ 0.53
CDK5RAP1-203ENST00000357886 ARID4BQ4LE39 1312 aaPredicted RBP18.35■□□□□ 0.53
CDK5RAP1-203ENST00000357886 KDM5DQ9BY66 1539 aa18.35■□□□□ 0.53
CDK5RAP1-203ENST00000357886 CARMIL2Q6F5E8 1435 aa18.35■□□□□ 0.53
CDK5RAP1-203ENST00000357886 SMG6Q86US8 1419 aaKnown RBP18.34■□□□□ 0.53
CDK5RAP1-203ENST00000357886 JPH4Q96JJ6 628 aa18.34■□□□□ 0.53
CDK5RAP1-203ENST00000357886 C9orf84Q5VXU9 1444 aa18.33■□□□□ 0.53
CDK5RAP1-203ENST00000357886 ARHGEF12Q9NZN5 1544 aa18.33■□□□□ 0.52
CDK5RAP1-203ENST00000357886 ATP10BO94823 1461 aa18.32■□□□□ 0.52
CDK5RAP1-203ENST00000357886 ZNF326Q5BKZ1 582 aaKnown RBP18.32■□□□□ 0.52
CDK5RAP1-203ENST00000357886 B4GALNT3Q6L9W6 998 aa18.31■□□□□ 0.52
CDK5RAP1-203ENST00000357886 PTPRGP23470 1445 aa18.31■□□□□ 0.52
CDK5RAP1-203ENST00000357886 NUP155O75694 1391 aa18.3■□□□□ 0.52
CDK5RAP1-203ENST00000357886 RNF123Q5XPI4 1314 aa18.29■□□□□ 0.52
CDK5RAP1-203ENST00000357886 PLEKHD1A6NEE1 506 aa18.27■□□□□ 0.52
CDK5RAP1-203ENST00000357886 ROCK2O75116 1388 aaKnown RBP18.27■□□□□ 0.52
CDK5RAP1-203ENST00000357886 ARHGEF5Q12774 1597 aa18.26■□□□□ 0.51
CDK5RAP1-203ENST00000357886 FBLN2P98095 1184 aa18.26■□□□□ 0.51
CDK5RAP1-203ENST00000357886 PNISRQ8TF01 805 aaKnown RBP18.25■□□□□ 0.51
CDK5RAP1-203ENST00000357886 POLR3GLQ9BT43 218 aa18.25■□□□□ 0.51
CDK5RAP1-203ENST00000357886 NUDCQ9Y266 331 aa18.25■□□□□ 0.51
CDK5RAP1-203ENST00000357886 CARD11Q9BXL7 1154 aa18.24■□□□□ 0.51
CDK5RAP1-203ENST00000357886 E9PCH4 1651 aa18.23■□□□□ 0.51
CDK5RAP1-203ENST00000357886 KIF15Q9NS87 1388 aa18.23■□□□□ 0.51
CDK5RAP1-203ENST00000357886 CNGB1Q14028 1251 aaPredicted RBP18.23■□□□□ 0.51
CDK5RAP1-203ENST00000357886 LRPPRCP42704 1394 aaKnown RBP18.21■□□□□ 0.51
CDK5RAP1-203ENST00000357886 ST20-MTHFSA0A0A6YYL1 179 aa18.2■□□□□ 0.5
CDK5RAP1-203ENST00000357886 HNRNPMP52272 730 aaKnown RBP eCLIP18.2■□□□□ 0.5
CDK5RAP1-203ENST00000357886 SAMD9LQ8IVG5 1584 aa18.2■□□□□ 0.5
CDK5RAP1-203ENST00000357886 TSPY4P0CV99 314 aa18.2■□□□□ 0.5
CDK5RAP1-203ENST00000357886 TSPY10P0CW01 314 aa18.2■□□□□ 0.5
CDK5RAP1-203ENST00000357886 CDC42BPBQ9Y5S2 1711 aa18.18■□□□□ 0.5
CDK5RAP1-203ENST00000357886 FAM135AQ9P2D6 1515 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms