RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 ANKRD30AQ9BXX3 1397 aa14.18□□□□□ -0.14
FN1-205ENST00000357867 WASHC2CQ9Y4E1 1318 aa14.17□□□□□ -0.14
FN1-205ENST00000357867 FANCD2Q9BXW9 1451 aa14.17□□□□□ -0.14
FN1-205ENST00000357867 KCNJ4P48050 445 aa14.17□□□□□ -0.14
FN1-205ENST00000357867 SPAG9O60271 1321 aaKnown RBP14.16□□□□□ -0.14
FN1-205ENST00000357867 CC2D1BQ5T0F9 858 aaKnown RBP14.16□□□□□ -0.14
FN1-205ENST00000357867 MORC1Q86VD1 984 aa14.16□□□□□ -0.14
FN1-205ENST00000357867 CALD1Q05682 793 aaKnown RBP14.15□□□□□ -0.14
FN1-205ENST00000357867 CYB5RLQ6IPT4 315 aa14.15□□□□□ -0.14
FN1-205ENST00000357867 DDRGK1Q96HY6 314 aa14.15□□□□□ -0.14
FN1-205ENST00000357867 ANP32EQ9BTT0 268 aa14.13□□□□□ -0.15
FN1-205ENST00000357867 KIF3BO15066 747 aa14.12□□□□□ -0.15
FN1-205ENST00000357867 JPH4Q96JJ6 628 aa14.12□□□□□ -0.15
FN1-205ENST00000357867 RAPGEF2Q9Y4G8 1499 aa14.12□□□□□ -0.15
FN1-205ENST00000357867 ROCK2O75116 1388 aaKnown RBP14.12□□□□□ -0.15
FN1-205ENST00000357867 G3V3G9 751 aa14.11□□□□□ -0.15
FN1-205ENST00000357867 DCAF8Q5TAQ9 597 aa14.11□□□□□ -0.15
FN1-205ENST00000357867 NGDNQ8NEJ9 315 aaKnown RBP14.1□□□□□ -0.15
FN1-205ENST00000357867 MEX3CQ5U5Q3 659 aaKnown RBP14.1□□□□□ -0.15
FN1-205ENST00000357867 ISY1Q9ULR0 285 aaKnown RBP14.1□□□□□ -0.15
FN1-205ENST00000357867 UACAQ9BZF9 1416 aa14.1□□□□□ -0.15
FN1-205ENST00000357867 NUP155O75694 1391 aa14.09□□□□□ -0.15
FN1-205ENST00000357867 NAP1L2Q9ULW6 460 aaPredicted RBP14.09□□□□□ -0.15
FN1-205ENST00000357867 CFAP44Q96MT7 982 aa14.08□□□□□ -0.16
FN1-205ENST00000357867 TERF2IPQ9NYB0 399 aa14.08□□□□□ -0.16
FN1-205ENST00000357867 SETD5Q9C0A6 1442 aa14.08□□□□□ -0.16
FN1-205ENST00000357867 FRAT1Q92837 279 aaPredicted RBP14.07□□□□□ -0.16
FN1-205ENST00000357867 EVA1CP58658 441 aa14.07□□□□□ -0.16
FN1-205ENST00000357867 ATAD2BQ9ULI0 1458 aa14.07□□□□□ -0.16
FN1-205ENST00000357867 PKD2Q13563 968 aa14.07□□□□□ -0.16
FN1-205ENST00000357867 ZNF330Q9Y3S2 320 aaPredicted RBP14.06□□□□□ -0.16
FN1-205ENST00000357867 VPS8Q8N3P4 1428 aa14.05□□□□□ -0.16
FN1-205ENST00000357867 HDAC5Q9UQL6 1122 aa14.04□□□□□ -0.16
FN1-205ENST00000357867 MCCP23508 829 aa14.04□□□□□ -0.16
FN1-205ENST00000357867 HNRNPMP52272 730 aaKnown RBP eCLIP14.04□□□□□ -0.16
FN1-205ENST00000357867 TAOK2Q9UL54 1235 aa14.04□□□□□ -0.16
FN1-205ENST00000357867 GAPVD1Q14C86 1478 aa14.03□□□□□ -0.16
FN1-205ENST00000357867 TAF7LQ5H9L4 462 aa14.03□□□□□ -0.16
FN1-205ENST00000357867 PTPRGP23470 1445 aa14.02□□□□□ -0.16
FN1-205ENST00000357867 IPO8O15397 1037 aaKnown RBP14.02□□□□□ -0.17
FN1-205ENST00000357867 KTN1Q86UP2 1357 aaKnown RBP14.02□□□□□ -0.17
FN1-205ENST00000357867 DCAF8L1A6NGE4 600 aa14.02□□□□□ -0.17
FN1-205ENST00000357867 AMPHP49418 695 aa14.02□□□□□ -0.17
FN1-205ENST00000357867 CC2D2AQ9P2K1 1620 aa14.01□□□□□ -0.17
FN1-205ENST00000357867 CLSTN1O94985 981 aa14□□□□□ -0.17
FN1-205ENST00000357867 GOLGA6L6A8MZA4 724 aa14□□□□□ -0.17
FN1-205ENST00000357867 TIMELESSQ9UNS1 1208 aa14□□□□□ -0.17
FN1-205ENST00000357867 IRX6P78412 446 aaPredicted RBP14□□□□□ -0.17
FN1-205ENST00000357867 TRIM44Q96DX7 344 aaPredicted RBP13.99□□□□□ -0.17
FN1-205ENST00000357867 GPATCH3Q96I76 525 aa13.99□□□□□ -0.17
FN1-205ENST00000357867 GTF2E1P29083 439 aaPredicted RBP13.99□□□□□ -0.17
FN1-205ENST00000357867 FAM69CQ0P6D2 419 aa13.98□□□□□ -0.17
FN1-205ENST00000357867 GORABQ5T7V8 394 aa13.98□□□□□ -0.17
FN1-205ENST00000357867 KIAA1211Q6ZU35 1233 aa13.98□□□□□ -0.17
FN1-205ENST00000357867 GNL2Q13823 731 aaKnown RBP13.97□□□□□ -0.17
FN1-205ENST00000357867 SIN3AQ96ST3 1273 aa13.97□□□□□ -0.17
FN1-205ENST00000357867 CHMP3Q9Y3E7 222 aa13.96□□□□□ -0.17
FN1-205ENST00000357867 STK31Q9BXU1 1019 aa13.96□□□□□ -0.17
FN1-205ENST00000357867 UNC13AQ9UPW8 1703 aa13.96□□□□□ -0.17
FN1-205ENST00000357867 HSP90AB1P08238 724 aaKnown RBP13.95□□□□□ -0.18
FN1-205ENST00000357867 MPHOSPH9Q99550 1183 aa13.95□□□□□ -0.18
FN1-205ENST00000357867 LMOD3Q0VAK6 560 aa13.95□□□□□ -0.18
FN1-205ENST00000357867 U2AF1L5P0DN76 240 aaPredicted RBP13.94□□□□□ -0.18
FN1-205ENST00000357867 U2AF1Q01081 240 aaKnown RBP eCLIP13.94□□□□□ -0.182e-9■■□□□ 12.6
FN1-205ENST00000357867 PHF23Q9BUL5 403 aaPredicted RBP13.94□□□□□ -0.18
FN1-205ENST00000357867 FHOD3Q2V2M9 1422 aa13.94□□□□□ -0.18
FN1-205ENST00000357867 NRDCO43847 1150 aa13.94□□□□□ -0.18
FN1-205ENST00000357867 NBR1Q14596 966 aa13.94□□□□□ -0.18
FN1-205ENST00000357867 MIER1Q8N108 512 aa13.93□□□□□ -0.18
FN1-205ENST00000357867 GOLGA6L4A6NEF3 574 aa13.93□□□□□ -0.18
FN1-205ENST00000357867 CCDC144AA2RUR9 1427 aa13.93□□□□□ -0.18
FN1-205ENST00000357867 VGFO15240 615 aaPredicted RBP13.93□□□□□ -0.18
FN1-205ENST00000357867 PTMAP06454 111 aaKnown RBP13.93□□□□□ -0.18
FN1-205ENST00000357867 ATF3P18847 181 aa13.93□□□□□ -0.18
FN1-205ENST00000357867 CUX1P39880 1505 aa13.92□□□□□ -0.18
FN1-205ENST00000357867 CFAP65Q6ZU64 1925 aaKnown RBP13.92□□□□□ -0.18
FN1-205ENST00000357867 TPRNQ4KMQ1 711 aa13.92□□□□□ -0.18
FN1-205ENST00000357867 C1orf141Q5JVX7 400 aa13.92□□□□□ -0.18
FN1-205ENST00000357867 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.91□□□□□ -0.18
FN1-205ENST00000357867 FGD5Q6ZNL6 1462 aa13.91□□□□□ -0.18
FN1-205ENST00000357867 MSH5O43196 834 aa13.9□□□□□ -0.18
FN1-205ENST00000357867 PSME1Q06323 249 aa13.9□□□□□ -0.18
FN1-205ENST00000357867 FRAT2O75474 233 aaPredicted RBP13.9□□□□□ -0.18
FN1-205ENST00000357867 ARHGAP5Q13017 1502 aa13.9□□□□□ -0.19
FN1-205ENST00000357867 FOXD1Q16676 465 aa13.89□□□□□ -0.19
FN1-205ENST00000357867 NUTM2DQ5VT03 806 aaPredicted RBP13.89□□□□□ -0.19
FN1-205ENST00000357867 RALBP1Q15311 655 aa13.88□□□□□ -0.19
FN1-205ENST00000357867 LTV1Q96GA3 475 aaPredicted RBP13.88□□□□□ -0.19
FN1-205ENST00000357867 SENP3-EIF4A1A0A087X0R7 540 aa13.88□□□□□ -0.19
FN1-205ENST00000357867 NUTM2FA1L443 756 aa13.88□□□□□ -0.19
FN1-205ENST00000357867 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.88□□□□□ -0.19
FN1-205ENST00000357867 EVC2Q86UK5 1308 aa13.87□□□□□ -0.19
FN1-205ENST00000357867 SUPT16HQ9Y5B9 1047 aaKnown RBP13.86□□□□□ -0.19
FN1-205ENST00000357867 NCBP3Q53F19 620 aaKnown RBP13.86□□□□□ -0.19
FN1-205ENST00000357867 RGS3P49796 1198 aa13.86□□□□□ -0.19
FN1-205ENST00000357867 COG3Q96JB2 828 aa13.85□□□□□ -0.19
FN1-205ENST00000357867 HSCBQ8IWL3 235 aa13.84□□□□□ -0.19
FN1-205ENST00000357867 MRC2Q9UBG0 1479 aa13.84□□□□□ -0.19
FN1-205ENST00000357867 HMMRO75330 724 aa13.84□□□□□ -0.19
FN1-205ENST00000357867 L1TD1Q5T7N2 865 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms