RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 PLCH2O75038 1416 aa14.34□□□□□ -0.11
COL4A3BP-202ENST00000357457 POGZQ7Z3K3 1410 aa14.34□□□□□ -0.11
COL4A3BP-202ENST00000357457 YEATS2Q9ULM3 1422 aa14.33□□□□□ -0.11
COL4A3BP-202ENST00000357457 SIGLEC1Q9BZZ2 1709 aa14.32□□□□□ -0.12
COL4A3BP-202ENST00000357457 CDK13Q14004 1512 aaKnown RBP14.32□□□□□ -0.12
COL4A3BP-202ENST00000357457 SCAPERQ9BY12 1400 aa14.32□□□□□ -0.12
COL4A3BP-202ENST00000357457 ZFYVE16Q7Z3T8 1539 aa14.31□□□□□ -0.12
COL4A3BP-202ENST00000357457 HECW1Q76N89 1606 aa14.31□□□□□ -0.12
COL4A3BP-202ENST00000357457 HSPA2P54652 639 aa14.29□□□□□ -0.12
COL4A3BP-202ENST00000357457 EFCAB2Q5VUJ9 269 aa14.29□□□□□ -0.12
COL4A3BP-202ENST00000357457 FMN1Q68DA7 1419 aa14.28□□□□□ -0.12
COL4A3BP-202ENST00000357457 ATP10AO60312 1499 aa14.27□□□□□ -0.12
COL4A3BP-202ENST00000357457 CDK11AQ9UQ88 783 aaPredicted RBP14.27□□□□□ -0.13
COL4A3BP-202ENST00000357457 UBTFP17480 764 aaKnown RBP14.26□□□□□ -0.13
COL4A3BP-202ENST00000357457 MLECQ14165 292 aa14.26□□□□□ -0.13
COL4A3BP-202ENST00000357457 SETD1BQ9UPS6 1966 aaKnown RBP14.25□□□□□ -0.13
COL4A3BP-202ENST00000357457 ARHGAP35Q9NRY4 1499 aa14.25□□□□□ -0.13
COL4A3BP-202ENST00000357457 FER1L4A9Z1Z3 1794 aa14.25□□□□□ -0.13
COL4A3BP-202ENST00000357457 ARHGEF12Q9NZN5 1544 aa14.25□□□□□ -0.13
COL4A3BP-202ENST00000357457 MYO5CQ9NQX4 1742 aa14.24□□□□□ -0.13
COL4A3BP-202ENST00000357457 C9orf84Q5VXU9 1444 aa14.24□□□□□ -0.13
COL4A3BP-202ENST00000357457 ATP1B4Q9UN42 357 aaPredicted RBP14.23□□□□□ -0.13
COL4A3BP-202ENST00000357457 TROQ12816 1431 aaPredicted RBP14.22□□□□□ -0.13
COL4A3BP-202ENST00000357457 AFAP1Q8N556 730 aa14.21□□□□□ -0.13
COL4A3BP-202ENST00000357457 ZNF518AQ6AHZ1 1483 aa14.2□□□□□ -0.14
COL4A3BP-202ENST00000357457 KIF14Q15058 1648 aa14.2□□□□□ -0.14
COL4A3BP-202ENST00000357457 CERKQ8TCT0 537 aa14.2□□□□□ -0.14
COL4A3BP-202ENST00000357457 KDM5CP41229 1560 aa14.19□□□□□ -0.14
COL4A3BP-202ENST00000357457 CEBPAP49715 358 aaPredicted RBP14.18□□□□□ -0.14
COL4A3BP-202ENST00000357457 EHMT2Q96KQ7 1210 aa14.18□□□□□ -0.14
COL4A3BP-202ENST00000357457 PREX1Q8TCU6 1659 aa14.17□□□□□ -0.14
COL4A3BP-202ENST00000357457 LRRIQ1Q96JM4 1722 aa14.17□□□□□ -0.14
COL4A3BP-202ENST00000357457 CDC42BPBQ9Y5S2 1711 aa14.17□□□□□ -0.14
COL4A3BP-202ENST00000357457 CLIP1P30622 1438 aa14.16□□□□□ -0.14
COL4A3BP-202ENST00000357457 ARHGAP5Q13017 1502 aa14.16□□□□□ -0.14
COL4A3BP-202ENST00000357457 PPP4R3CPQ6ZMV5 832 aa14.16□□□□□ -0.14
COL4A3BP-202ENST00000357457 MLH3Q9UHC1 1453 aa14.16□□□□□ -0.14
COL4A3BP-202ENST00000357457 REREQ9P2R6 1566 aa14.16□□□□□ -0.14
COL4A3BP-202ENST00000357457 DMRT2Q9Y5R5 561 aa14.15□□□□□ -0.14
COL4A3BP-202ENST00000357457 STRCQ7RTU9 1775 aa14.14□□□□□ -0.15
COL4A3BP-202ENST00000357457 DIP2CQ9Y2E4 1556 aa14.13□□□□□ -0.15
COL4A3BP-202ENST00000357457 AGLP35573 1532 aa14.12□□□□□ -0.15
COL4A3BP-202ENST00000357457 CASKIN1Q8WXD9 1431 aa14.12□□□□□ -0.15
COL4A3BP-202ENST00000357457 TRAPPC8Q9Y2L5 1435 aa14.12□□□□□ -0.15
COL4A3BP-202ENST00000357457 UHRF1BP1Q6BDS2 1440 aa14.11□□□□□ -0.15
COL4A3BP-202ENST00000357457 MYT1LQ9UL68 1186 aa14.11□□□□□ -0.15
COL4A3BP-202ENST00000357457 PREX2Q70Z35 1606 aa14.1□□□□□ -0.15
COL4A3BP-202ENST00000357457 ABCA6Q8N139 1617 aa14.1□□□□□ -0.15
COL4A3BP-202ENST00000357457 CCDC18Q5T9S5 1454 aa14.09□□□□□ -0.15
COL4A3BP-202ENST00000357457 ABCC1P33527 1531 aa14.09□□□□□ -0.15
COL4A3BP-202ENST00000357457 C3P01024 1663 aa14.08□□□□□ -0.16
COL4A3BP-202ENST00000357457 KIDINS220Q9ULH0 1771 aa14.08□□□□□ -0.16
COL4A3BP-202ENST00000357457 SCAF1Q9H7N4 1312 aaKnown RBP14.08□□□□□ -0.16
COL4A3BP-202ENST00000357457 ITSN2Q9NZM3 1697 aa14.07□□□□□ -0.16
COL4A3BP-202ENST00000357457 CDC42BPAQ5VT25 1732 aa14.07□□□□□ -0.16
COL4A3BP-202ENST00000357457 PTPRTO14522 1441 aa14.07□□□□□ -0.16
COL4A3BP-202ENST00000357457 ESF1Q9H501 851 aaKnown RBP14.05□□□□□ -0.16
COL4A3BP-202ENST00000357457 CNTLNQ9NXG0 1405 aa14.05□□□□□ -0.16
COL4A3BP-202ENST00000357457 SAMD9LQ8IVG5 1584 aa14.02□□□□□ -0.16
COL4A3BP-202ENST00000357457 GPATCH8Q9UKJ3 1502 aaKnown RBP14.02□□□□□ -0.16
COL4A3BP-202ENST00000357457 FYCO1Q9BQS8 1478 aa14.02□□□□□ -0.16
COL4A3BP-202ENST00000357457 NPATQ14207 1427 aa14□□□□□ -0.17
COL4A3BP-202ENST00000357457 KIAA1107Q9UPP5 1409 aa14□□□□□ -0.17
COL4A3BP-202ENST00000357457 ZMYM3Q14202 1370 aa14□□□□□ -0.17
COL4A3BP-202ENST00000357457 HNRNPMP52272 730 aaKnown RBP eCLIP14□□□□□ -0.17
COL4A3BP-202ENST00000357457 ZNF777Q9ULD5 760 aaPredicted RBP14□□□□□ -0.17
COL4A3BP-202ENST00000357457 NCOA1Q15788 1441 aa13.99□□□□□ -0.17
COL4A3BP-202ENST00000357457 SPAG9O60271 1321 aaKnown RBP13.99□□□□□ -0.17
COL4A3BP-202ENST00000357457 MROH2AA6NES4 1674 aa13.99□□□□□ -0.17
COL4A3BP-202ENST00000357457 LTBP4Q8N2S1 1624 aa13.99□□□□□ -0.17
COL4A3BP-202ENST00000357457 SYCP2Q9BX26 1530 aa13.97□□□□□ -0.17
COL4A3BP-202ENST00000357457 IQSEC2Q5JU85 1478 aa13.97□□□□□ -0.17
COL4A3BP-202ENST00000357457 PLEKHH2Q8IVE3 1493 aa13.96□□□□□ -0.17
COL4A3BP-202ENST00000357457 CFDP1Q9UEE9 299 aaPredicted RBP13.96□□□□□ -0.17
COL4A3BP-202ENST00000357457 SUPT6HQ7KZ85 1726 aaKnown RBP13.95□□□□□ -0.18
COL4A3BP-202ENST00000357457 PLXNC1O60486 1568 aa13.95□□□□□ -0.18
COL4A3BP-202ENST00000357457 CAMSAP1Q5T5Y3 1602 aa13.94□□□□□ -0.18
COL4A3BP-202ENST00000357457 NCBP3Q53F19 620 aaKnown RBP13.94□□□□□ -0.18
COL4A3BP-202ENST00000357457 ILDR2Q71H61 639 aa13.94□□□□□ -0.18
COL4A3BP-202ENST00000357457 ATP7AQ04656 1500 aa13.94□□□□□ -0.18
COL4A3BP-202ENST00000357457 A2MP01023 1474 aa13.93□□□□□ -0.18
COL4A3BP-202ENST00000357457 KCNA4P22459 653 aa13.93□□□□□ -0.18
COL4A3BP-202ENST00000357457 CCNB3Q8WWL7 1395 aa13.93□□□□□ -0.18
COL4A3BP-202ENST00000357457 DISP3Q9P2K9 1392 aa13.93□□□□□ -0.18
COL4A3BP-202ENST00000357457 NCKAP5LQ9HCH0 1330 aa13.92□□□□□ -0.18
COL4A3BP-202ENST00000357457 INO80Q9ULG1 1556 aaPredicted RBP13.92□□□□□ -0.18
COL4A3BP-202ENST00000357457 PTPRKQ15262 1439 aa13.92□□□□□ -0.18
COL4A3BP-202ENST00000357457 PKD2Q13563 968 aa13.91□□□□□ -0.18
COL4A3BP-202ENST00000357457 GGT6Q6P531 493 aa13.91□□□□□ -0.18
COL4A3BP-202ENST00000357457 CLTCQ00610 1675 aaKnown RBP13.91□□□□□ -0.18
COL4A3BP-202ENST00000357457 MTUS2Q5JR59 1369 aa13.9□□□□□ -0.18
COL4A3BP-202ENST00000357457 PLA2R1Q13018 1463 aa13.9□□□□□ -0.18
COL4A3BP-202ENST00000357457 ZNF142P52746 1687 aaPredicted RBP13.89□□□□□ -0.19
COL4A3BP-202ENST00000357457 MBD5Q9P267 1494 aa13.89□□□□□ -0.19
COL4A3BP-202ENST00000357457 SOCS7O14512 581 aa13.89□□□□□ -0.19
COL4A3BP-202ENST00000357457 RTEL1-TNFRSF6BF6WH68 1400 aa13.89□□□□□ -0.19
COL4A3BP-202ENST00000357457 ZNF644Q9H582 1327 aaPredicted RBP13.89□□□□□ -0.19
COL4A3BP-202ENST00000357457 TCOF1Q13428 1488 aaKnown RBP13.88□□□□□ -0.19
COL4A3BP-202ENST00000357457 ADGBQ8N7X0 1667 aa13.88□□□□□ -0.19
COL4A3BP-202ENST00000357457 ZNF335Q9H4Z2 1342 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms