RNA–Protein interactions for RNA: ENST00000356537.8

CCDC25-201, Transcript of coiled-coil domain containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC25, Length 3,626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-201ENST00000356537 ITSN2Q9NZM3 1697 aa13.85□□□□□ -0.19
CCDC25-201ENST00000356537 MIER1Q8N108 512 aa13.85□□□□□ -0.19
CCDC25-201ENST00000356537 CAMSAP2Q08AD1 1489 aa13.83□□□□□ -0.2
CCDC25-201ENST00000356537 ABCC10Q5T3U5 1492 aa13.83□□□□□ -0.2
CCDC25-201ENST00000356537 NEUROD1Q13562 356 aa13.83□□□□□ -0.2
CCDC25-201ENST00000356537 ADGBQ8N7X0 1667 aa13.79□□□□□ -0.2
CCDC25-201ENST00000356537 CLASP1Q7Z460 1538 aa13.79□□□□□ -0.2
CCDC25-201ENST00000356537 CDC42BPBQ9Y5S2 1711 aa13.78□□□□□ -0.2
CCDC25-201ENST00000356537 ROCK1Q13464 1354 aa13.77□□□□□ -0.2
CCDC25-201ENST00000356537 SCAF1Q9H7N4 1312 aaKnown RBP13.76□□□□□ -0.21
CCDC25-201ENST00000356537 PTPRGP23470 1445 aa13.75□□□□□ -0.21
CCDC25-201ENST00000356537 PPP1R15AO75807 674 aaPredicted RBP13.75□□□□□ -0.21
CCDC25-201ENST00000356537 CDK11AQ9UQ88 783 aaPredicted RBP13.75□□□□□ -0.21
CCDC25-201ENST00000356537 TTC37Q6PGP7 1564 aa13.73□□□□□ -0.21
CCDC25-201ENST00000356537 NCOA1Q15788 1441 aa13.72□□□□□ -0.21
CCDC25-201ENST00000356537 ADGRL2O95490 1459 aa13.72□□□□□ -0.21
CCDC25-201ENST00000356537 PREX2Q70Z35 1606 aa13.72□□□□□ -0.21
CCDC25-201ENST00000356537 SAMD9LQ8IVG5 1584 aa13.72□□□□□ -0.21
CCDC25-201ENST00000356537 CFDP1Q9UEE9 299 aaPredicted RBP13.71□□□□□ -0.21
CCDC25-201ENST00000356537 TIMELESSQ9UNS1 1208 aa13.71□□□□□ -0.21
CCDC25-201ENST00000356537 FOXD1Q16676 465 aa13.71□□□□□ -0.21
CCDC25-201ENST00000356537 PZPP20742 1482 aa13.7□□□□□ -0.22
CCDC25-201ENST00000356537 ABCC2Q92887 1545 aa13.69□□□□□ -0.22
CCDC25-201ENST00000356537 MPHOSPH9Q99550 1183 aa13.69□□□□□ -0.22
CCDC25-201ENST00000356537 ACIN1Q9UKV3 1341 aaKnown RBP13.69□□□□□ -0.22
CCDC25-201ENST00000356537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.69□□□□□ -0.222e-7■■■■□ 26.2
CCDC25-201ENST00000356537 MBD5Q9P267 1494 aa13.68□□□□□ -0.22
CCDC25-201ENST00000356537 HIRIP3Q9BW71 556 aaPredicted RBP13.68□□□□□ -0.22
CCDC25-201ENST00000356537 ZCCHC11Q5TAX3 1644 aaKnown RBP13.68□□□□□ -0.22
CCDC25-201ENST00000356537 PLEKHD1A6NEE1 506 aa13.67□□□□□ -0.22
CCDC25-201ENST00000356537 ZNF777Q9ULD5 760 aaPredicted RBP13.67□□□□□ -0.22
CCDC25-201ENST00000356537 ANKRD30BQ9BXX2 1392 aa13.66□□□□□ -0.22
CCDC25-201ENST00000356537 TONSLQ96HA7 1378 aa13.66□□□□□ -0.22
CCDC25-201ENST00000356537 TRIM52Q96A61 297 aa13.65□□□□□ -0.22
CCDC25-201ENST00000356537 ARHGEF5Q12774 1597 aa13.65□□□□□ -0.22
CCDC25-201ENST00000356537 SHANK2Q9UPX8 1470 aa13.65□□□□□ -0.22
CCDC25-201ENST00000356537 TEX14Q8IWB6 1497 aa13.64□□□□□ -0.23
CCDC25-201ENST00000356537 YTHDC1Q96MU7 727 aaKnown RBP13.63□□□□□ -0.23
CCDC25-201ENST00000356537 MYO5CQ9NQX4 1742 aa13.63□□□□□ -0.23
CCDC25-201ENST00000356537 C9orf84Q5VXU9 1444 aa13.63□□□□□ -0.23
CCDC25-201ENST00000356537 RPRD2Q5VT52 1461 aaKnown RBP13.62□□□□□ -0.23
CCDC25-201ENST00000356537 SYCP2Q9BX26 1530 aa13.61□□□□□ -0.23
CCDC25-201ENST00000356537 HNRNPMP52272 730 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCDC25-201ENST00000356537 ARHGEF12Q9NZN5 1544 aa13.59□□□□□ -0.23
CCDC25-201ENST00000356537 KCNH8Q96L42 1107 aa13.59□□□□□ -0.23
CCDC25-201ENST00000356537 UHRF1BP1LA0JNW5 1464 aa13.59□□□□□ -0.23
CCDC25-201ENST00000356537 ANKRD50Q9ULJ7 1429 aa13.59□□□□□ -0.23
CCDC25-201ENST00000356537 ANKRD30AQ9BXX3 1397 aa13.57□□□□□ -0.24
CCDC25-201ENST00000356537 KDM5DQ9BY66 1539 aa13.57□□□□□ -0.24
CCDC25-201ENST00000356537 L3MBTL2Q969R5 705 aa13.57□□□□□ -0.24
CCDC25-201ENST00000356537 CCDC141Q6ZP82 1450 aa13.56□□□□□ -0.24
CCDC25-201ENST00000356537 ARHGAP5Q13017 1502 aa13.56□□□□□ -0.24
CCDC25-201ENST00000356537 DDX10Q13206 875 aaKnown RBP13.56□□□□□ -0.24
CCDC25-201ENST00000356537 MAST1Q9Y2H9 1570 aa13.56□□□□□ -0.24
CCDC25-201ENST00000356537 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
CCDC25-201ENST00000356537 NBPF8Q3BBV2 869 aa13.55□□□□□ -0.24
CCDC25-201ENST00000356537 KIAA1107Q9UPP5 1409 aa13.54□□□□□ -0.24
CCDC25-201ENST00000356537 KIF15Q9NS87 1388 aa13.53□□□□□ -0.24
CCDC25-201ENST00000356537 CENPBP07199 599 aaPredicted RBP13.52□□□□□ -0.24
CCDC25-201ENST00000356537 PLXNC1O60486 1568 aa13.52□□□□□ -0.25
CCDC25-201ENST00000356537 UNC13BO14795 1591 aa13.51□□□□□ -0.25
CCDC25-201ENST00000356537 GTF3C3Q9Y5Q9 886 aa13.51□□□□□ -0.25
CCDC25-201ENST00000356537 ABCC1P33527 1531 aa13.5□□□□□ -0.25
CCDC25-201ENST00000356537 PLCH2O75038 1416 aa13.49□□□□□ -0.25
CCDC25-201ENST00000356537 POLR1AO95602 1720 aaPredicted RBP13.49□□□□□ -0.25
CCDC25-201ENST00000356537 PKD2Q13563 968 aa13.49□□□□□ -0.25
CCDC25-201ENST00000356537 FAM135AQ9P2D6 1515 aa13.49□□□□□ -0.25
CCDC25-201ENST00000356537 SPATA31E1Q6ZUB1 1445 aa13.48□□□□□ -0.25
CCDC25-201ENST00000356537 HSPA5P11021 654 aaKnown RBP13.48□□□□□ -0.25
CCDC25-201ENST00000356537 NUP155O75694 1391 aa13.48□□□□□ -0.25
CCDC25-201ENST00000356537 C11orf95C9JLR9 678 aaPredicted RBP13.48□□□□□ -0.25
CCDC25-201ENST00000356537 WASHC2AQ641Q2 1341 aa13.48□□□□□ -0.25
CCDC25-201ENST00000356537 TSPY4P0CV99 314 aa13.46□□□□□ -0.25
CCDC25-201ENST00000356537 TSPY10P0CW01 314 aa13.46□□□□□ -0.25
CCDC25-201ENST00000356537 TRAPPC8Q9Y2L5 1435 aa13.46□□□□□ -0.25
CCDC25-201ENST00000356537 ABCA9Q8IUA7 1624 aa13.46□□□□□ -0.25
CCDC25-201ENST00000356537 BCORL1Q5H9F3 1711 aa13.46□□□□□ -0.26
CCDC25-201ENST00000356537 IQGAP3Q86VI3 1631 aa13.45□□□□□ -0.26
CCDC25-201ENST00000356537 PLEKHH2Q8IVE3 1493 aa13.44□□□□□ -0.26
CCDC25-201ENST00000356537 PLA2R1Q13018 1463 aa13.44□□□□□ -0.26
CCDC25-201ENST00000356537 MAGI2Q86UL8 1455 aa13.44□□□□□ -0.26
CCDC25-201ENST00000356537 WDR7Q9Y4E6 1490 aa13.44□□□□□ -0.26
CCDC25-201ENST00000356537 ARAP3Q8WWN8 1544 aa13.42□□□□□ -0.26
CCDC25-201ENST00000356537 KDM5CP41229 1560 aa13.42□□□□□ -0.26
CCDC25-201ENST00000356537 ZFYVE16Q7Z3T8 1539 aa13.42□□□□□ -0.26
CCDC25-201ENST00000356537 RSPH4AQ5TD94 716 aa13.41□□□□□ -0.26
CCDC25-201ENST00000356537 DUOX2Q9NRD8 1548 aa13.4□□□□□ -0.26
CCDC25-201ENST00000356537 UHRF1BP1Q6BDS2 1440 aa13.39□□□□□ -0.27
CCDC25-201ENST00000356537 INO80Q9ULG1 1556 aaPredicted RBP13.39□□□□□ -0.27
CCDC25-201ENST00000356537 EIF4G2P78344 907 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCDC25-201ENST00000356537 ASXL2Q76L83 1435 aa13.38□□□□□ -0.27
CCDC25-201ENST00000356537 DEPDC5O75140 1603 aa13.37□□□□□ -0.27
CCDC25-201ENST00000356537 E9PCH4 1651 aa13.37□□□□□ -0.27
CCDC25-201ENST00000356537 ERBINQ96RT1 1412 aa13.37□□□□□ -0.27
CCDC25-201ENST00000356537 CCDC7Q96M83 1385 aa13.36□□□□□ -0.27
CCDC25-201ENST00000356537 AFAP1Q8N556 730 aa13.36□□□□□ -0.27
CCDC25-201ENST00000356537 FANCAO15360 1455 aa13.35□□□□□ -0.27
CCDC25-201ENST00000356537 EFCAB2Q5VUJ9 269 aa13.35□□□□□ -0.27
CCDC25-201ENST00000356537 TRPM1Q7Z4N2 1603 aa13.35□□□□□ -0.27
CCDC25-201ENST00000356537 RALGAPBQ86X10 1494 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms