RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 ABCC5O15440 1437 aa20.05■□□□□ 0.8
LSS-201ENST00000356396 DDX10Q13206 875 aaKnown RBP20.04■□□□□ 0.8
LSS-201ENST00000356396 GPATCH8Q9UKJ3 1502 aaKnown RBP20.04■□□□□ 0.8
LSS-201ENST00000356396 CYB5RLQ6IPT4 315 aa20.03■□□□□ 0.8
LSS-201ENST00000356396 DAPK1P53355 1430 aa20.01■□□□□ 0.79
LSS-201ENST00000356396 OSCARQ8IYS5 282 aa20.01■□□□□ 0.79
LSS-201ENST00000356396 HFM1A2PYH4 1435 aa20.01■□□□□ 0.79
LSS-201ENST00000356396 UACAQ9BZF9 1416 aa20■□□□□ 0.79
LSS-201ENST00000356396 AFAP1Q8N556 730 aa19.99■□□□□ 0.79
LSS-201ENST00000356396 CAMSAP2Q08AD1 1489 aa19.99■□□□□ 0.79
LSS-201ENST00000356396 TONSLQ96HA7 1378 aa19.98■□□□□ 0.79
LSS-201ENST00000356396 TSPY4P0CV99 314 aa19.97■□□□□ 0.79
LSS-201ENST00000356396 TSPY10P0CW01 314 aa19.97■□□□□ 0.79
LSS-201ENST00000356396 KDM2AQ9Y2K7 1162 aa19.97■□□□□ 0.79
LSS-201ENST00000356396 POLR3GLQ9BT43 218 aa19.96■□□□□ 0.79
LSS-201ENST00000356396 ABCA8O94911 1581 aa19.95■□□□□ 0.78
LSS-201ENST00000356396 PKD2Q13563 968 aa19.94■□□□□ 0.78
LSS-201ENST00000356396 L3MBTL2Q969R5 705 aa19.94■□□□□ 0.78
LSS-201ENST00000356396 PPP1R15AO75807 674 aaPredicted RBP19.93■□□□□ 0.78
LSS-201ENST00000356396 DENND4BO75064 1496 aaPredicted RBP19.93■□□□□ 0.78
LSS-201ENST00000356396 RGL3Q3MIN7 710 aa19.92■□□□□ 0.78
LSS-201ENST00000356396 SENP3-EIF4A1A0A087X0R7 540 aa19.9■□□□□ 0.78
LSS-201ENST00000356396 MIA2Q96PC5 1412 aa19.88■□□□□ 0.77
LSS-201ENST00000356396 NUP155O75694 1391 aa19.86■□□□□ 0.77
LSS-201ENST00000356396 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.86■□□□□ 0.775e-8■□□□□ 8.8
LSS-201ENST00000356396 CLSPNQ9HAW4 1339 aa19.86■□□□□ 0.77
LSS-201ENST00000356396 TCOF1Q13428 1488 aaKnown RBP19.86■□□□□ 0.77
LSS-201ENST00000356396 NBPF8Q3BBV2 869 aa19.85■□□□□ 0.77
LSS-201ENST00000356396 NCOA1Q15788 1441 aa19.84■□□□□ 0.77
LSS-201ENST00000356396 ARHGAP5Q13017 1502 aa19.84■□□□□ 0.77
LSS-201ENST00000356396 TTC37Q6PGP7 1564 aa19.84■□□□□ 0.77
LSS-201ENST00000356396 ABCC10Q5T3U5 1492 aa19.83■□□□□ 0.77
LSS-201ENST00000356396 C9orf84Q5VXU9 1444 aa19.81■□□□□ 0.76
LSS-201ENST00000356396 CDC42BPAQ5VT25 1732 aa19.8■□□□□ 0.76
LSS-201ENST00000356396 KIF15Q9NS87 1388 aa19.8■□□□□ 0.76
LSS-201ENST00000356396 AKNAQ7Z591 1439 aa19.79■□□□□ 0.76
LSS-201ENST00000356396 ANKRD50Q9ULJ7 1429 aa19.79■□□□□ 0.76
LSS-201ENST00000356396 SYCP2Q9BX26 1530 aa19.79■□□□□ 0.76
LSS-201ENST00000356396 CLASP1Q7Z460 1538 aa19.78■□□□□ 0.76
LSS-201ENST00000356396 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.78■□□□□ 0.767e-7■■□□□ 13.6
LSS-201ENST00000356396 ABCC2Q92887 1545 aa19.78■□□□□ 0.76
LSS-201ENST00000356396 NPM1P06748 294 aaKnown RBP eCLIP19.77■□□□□ 0.76
LSS-201ENST00000356396 ANKRD30AQ9BXX3 1397 aa19.77■□□□□ 0.75
LSS-201ENST00000356396 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
LSS-201ENST00000356396 ARHGEF12Q9NZN5 1544 aa19.75■□□□□ 0.75
LSS-201ENST00000356396 C11orf95C9JLR9 678 aaPredicted RBP19.75■□□□□ 0.75
LSS-201ENST00000356396 DNMT1P26358 1616 aaKnown RBP19.75■□□□□ 0.75
LSS-201ENST00000356396 RAPGEF3O95398 923 aa19.75■□□□□ 0.75
LSS-201ENST00000356396 HSPA5P11021 654 aaKnown RBP19.74■□□□□ 0.75
LSS-201ENST00000356396 TRAPPC8Q9Y2L5 1435 aa19.74■□□□□ 0.75
LSS-201ENST00000356396 SHROOM2Q13796 1616 aa19.73■□□□□ 0.75
LSS-201ENST00000356396 EFCAB2Q5VUJ9 269 aa19.72■□□□□ 0.75
LSS-201ENST00000356396 SAMD9LQ8IVG5 1584 aa19.72■□□□□ 0.75
LSS-201ENST00000356396 ZCCHC11Q5TAX3 1644 aaKnown RBP19.71■□□□□ 0.75
LSS-201ENST00000356396 DCAF11Q8TEB1 546 aa19.71■□□□□ 0.75
LSS-201ENST00000356396 CDC42BPBQ9Y5S2 1711 aa19.71■□□□□ 0.75
LSS-201ENST00000356396 MBD5Q9P267 1494 aa19.7■□□□□ 0.74
LSS-201ENST00000356396 PLEKHH2Q8IVE3 1493 aa19.69■□□□□ 0.74
LSS-201ENST00000356396 ADCY10Q96PN6 1610 aa19.68■□□□□ 0.74
LSS-201ENST00000356396 ANKRD30BQ9BXX2 1392 aa19.68■□□□□ 0.74
LSS-201ENST00000356396 PZPP20742 1482 aa19.68■□□□□ 0.74
LSS-201ENST00000356396 KIF3BO15066 747 aa19.67■□□□□ 0.74
LSS-201ENST00000356396 ASXL2Q76L83 1435 aa19.67■□□□□ 0.74
LSS-201ENST00000356396 SCAPERQ9BY12 1400 aa19.66■□□□□ 0.74
LSS-201ENST00000356396 SPAG9O60271 1321 aaKnown RBP19.65■□□□□ 0.74
LSS-201ENST00000356396 GGT6Q6P531 493 aa19.65■□□□□ 0.74
LSS-201ENST00000356396 NUTM2DQ5VT03 806 aaPredicted RBP19.64■□□□□ 0.73
LSS-201ENST00000356396 ROCK1Q13464 1354 aa19.63■□□□□ 0.73
LSS-201ENST00000356396 PLPPR3Q6T4P5 718 aa19.62■□□□□ 0.73
LSS-201ENST00000356396 GTF3C3Q9Y5Q9 886 aa19.62■□□□□ 0.73
LSS-201ENST00000356396 ITSN2Q9NZM3 1697 aa19.62■□□□□ 0.73
LSS-201ENST00000356396 GCC2Q8IWJ2 1684 aa19.62■□□□□ 0.73
LSS-201ENST00000356396 ACIN1Q9UKV3 1341 aaKnown RBP19.61■□□□□ 0.73
LSS-201ENST00000356396 CHGAP10645 457 aaKnown RBP19.6■□□□□ 0.73
LSS-201ENST00000356396 CCDC141Q6ZP82 1450 aa19.6■□□□□ 0.73
LSS-201ENST00000356396 NBPF1Q3BBV0 1214 aa19.59■□□□□ 0.73
LSS-201ENST00000356396 KDM5BQ9UGL1 1544 aa19.59■□□□□ 0.73
LSS-201ENST00000356396 WASHC2AQ641Q2 1341 aa19.58■□□□□ 0.73
LSS-201ENST00000356396 PLCH2O75038 1416 aa19.58■□□□□ 0.72
LSS-201ENST00000356396 FAM69CQ0P6D2 419 aa19.56■□□□□ 0.72
LSS-201ENST00000356396 MLECQ14165 292 aa19.56■□□□□ 0.72
LSS-201ENST00000356396 CCDC184Q52MB2 194 aa19.56■□□□□ 0.72
LSS-201ENST00000356396 WDR7Q9Y4E6 1490 aa19.55■□□□□ 0.72
LSS-201ENST00000356396 EIF4G2P78344 907 aaKnown RBP eCLIP19.55■□□□□ 0.72
LSS-201ENST00000356396 FANCAO15360 1455 aa19.55■□□□□ 0.72
LSS-201ENST00000356396 PREX2Q70Z35 1606 aa19.54■□□□□ 0.72
LSS-201ENST00000356396 KIAA1107Q9UPP5 1409 aa19.52■□□□□ 0.72
LSS-201ENST00000356396 CARD11Q9BXL7 1154 aa19.5■□□□□ 0.71
LSS-201ENST00000356396 CFAP65Q6ZU64 1925 aaKnown RBP19.5■□□□□ 0.71
LSS-201ENST00000356396 MYO5CQ9NQX4 1742 aa19.48■□□□□ 0.71
LSS-201ENST00000356396 RPRD2Q5VT52 1461 aaKnown RBP19.48■□□□□ 0.71
LSS-201ENST00000356396 ADGRL1O94910 1474 aa19.48■□□□□ 0.71
LSS-201ENST00000356396 ST20-MTHFSA0A0A6YYL1 179 aa19.47■□□□□ 0.71
LSS-201ENST00000356396 CD109Q6YHK3 1445 aa19.47■□□□□ 0.71
LSS-201ENST00000356396 CENPBP07199 599 aaPredicted RBP19.47■□□□□ 0.71
LSS-201ENST00000356396 CROCC2H7BZ55 1655 aa19.47■□□□□ 0.71
LSS-201ENST00000356396 ADGRL2O95490 1459 aa19.46■□□□□ 0.71
LSS-201ENST00000356396 TIMELESSQ9UNS1 1208 aa19.44■□□□□ 0.7
LSS-201ENST00000356396 ANP32CO43423 234 aa19.44■□□□□ 0.7
LSS-201ENST00000356396 TEX14Q8IWB6 1497 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms