RNA–Protein interactions for RNA: ENST00000355628.9

FAM208A-201, Transcript of family with sequence similarity 208 member A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM208A, Length 5,239 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM208A-201ENST00000355628 TRIM44Q96DX7 344 aaPredicted RBP20.49■□□□□ 0.87
FAM208A-201ENST00000355628 KANK4Q5T7N3 995 aaPredicted RBP20.48■□□□□ 0.87
FAM208A-201ENST00000355628 TOPBP1Q92547 1522 aa20.48■□□□□ 0.87
FAM208A-201ENST00000355628 NOP58Q9Y2X3 529 aaKnown RBP20.48■□□□□ 0.87
FAM208A-201ENST00000355628 CARD11Q9BXL7 1154 aa20.47■□□□□ 0.87
FAM208A-201ENST00000355628 EID1Q9Y6B2 187 aa20.46■□□□□ 0.87
FAM208A-201ENST00000355628 LAMC3Q9Y6N6 1575 aa20.44■□□□□ 0.86
FAM208A-201ENST00000355628 ERICH6BQ5W0A0 696 aa20.44■□□□□ 0.86
FAM208A-201ENST00000355628 KNSTRNQ9Y448 316 aa20.43■□□□□ 0.86
FAM208A-201ENST00000355628 CFAP53Q96M91 514 aa20.43■□□□□ 0.86
FAM208A-201ENST00000355628 RUSC2Q8N2Y8 1516 aa20.43■□□□□ 0.86
FAM208A-201ENST00000355628 PRG4Q92954 1404 aaPredicted RBP20.43■□□□□ 0.86
FAM208A-201ENST00000355628 NCLP19338 710 aaKnown RBP20.42■□□□□ 0.86
FAM208A-201ENST00000355628 SIN3AQ96ST3 1273 aa20.42■□□□□ 0.86
FAM208A-201ENST00000355628 PKD2Q13563 968 aa20.41■□□□□ 0.86
FAM208A-201ENST00000355628 NUP155O75694 1391 aa20.4■□□□□ 0.86
FAM208A-201ENST00000355628 DCAF11Q8TEB1 546 aa20.4■□□□□ 0.86
FAM208A-201ENST00000355628 POLA1P09884 1462 aaPredicted RBP20.39■□□□□ 0.85
FAM208A-201ENST00000355628 SNAPC4Q5SXM2 1469 aa20.37■□□□□ 0.85
FAM208A-201ENST00000355628 STK26Q9P289 416 aa20.35■□□□□ 0.85
FAM208A-201ENST00000355628 SAFB2Q14151 953 aaKnown RBP eCLIP20.34■□□□□ 0.85
FAM208A-201ENST00000355628 SETD5Q9C0A6 1442 aa20.32■□□□□ 0.84
FAM208A-201ENST00000355628 DNMBPQ6XZF7 1577 aa20.31■□□□□ 0.84
FAM208A-201ENST00000355628 SRPK2P78362 688 aaKnown RBP20.31■□□□□ 0.84
FAM208A-201ENST00000355628 CASC1Q6TDU7 716 aa20.3■□□□□ 0.84
FAM208A-201ENST00000355628 FTSJ3Q8IY81 847 aaKnown RBP20.3■□□□□ 0.84
FAM208A-201ENST00000355628 MS4A1P11836 297 aa20.29■□□□□ 0.84
FAM208A-201ENST00000355628 RBM19Q9Y4C8 960 aaKnown RBP20.29■□□□□ 0.84
FAM208A-201ENST00000355628 CHMP4BQ9H444 224 aaKnown RBP20.28■□□□□ 0.84
FAM208A-201ENST00000355628 B4GALNT3Q6L9W6 998 aa20.28■□□□□ 0.84
FAM208A-201ENST00000355628 LAS1LQ9Y4W2 734 aaKnown RBP20.27■□□□□ 0.84
FAM208A-201ENST00000355628 SYNJ2O15056 1496 aa20.23■□□□□ 0.83
FAM208A-201ENST00000355628 FOXD1Q16676 465 aa20.22■□□□□ 0.83
FAM208A-201ENST00000355628 NUDCQ9Y266 331 aa20.22■□□□□ 0.83
FAM208A-201ENST00000355628 TNNT2P45379 298 aaPredicted RBP20.21■□□□□ 0.83
FAM208A-201ENST00000355628 CUX1P39880 1505 aa20.21■□□□□ 0.83
FAM208A-201ENST00000355628 RGS3P49796 1198 aa20.21■□□□□ 0.83
FAM208A-201ENST00000355628 PTMAP06454 111 aaKnown RBP20.2■□□□□ 0.82
FAM208A-201ENST00000355628 MPHOSPH9Q99550 1183 aa20.2■□□□□ 0.82
FAM208A-201ENST00000355628 SOX12O15370 315 aa20.2■□□□□ 0.82
FAM208A-201ENST00000355628 MAPK8IP3Q9UPT6 1336 aa20.2■□□□□ 0.82
FAM208A-201ENST00000355628 TMF1P82094 1093 aa20.2■□□□□ 0.82
FAM208A-201ENST00000355628 NUTM2DQ5VT03 806 aaPredicted RBP20.19■□□□□ 0.82
FAM208A-201ENST00000355628 PRDM2Q13029 1718 aa20.18■□□□□ 0.82
FAM208A-201ENST00000355628 PAK3O75914 559 aaPredicted RBP20.18■□□□□ 0.82
FAM208A-201ENST00000355628 DEKP35659 375 aaKnown RBP20.17■□□□□ 0.82
FAM208A-201ENST00000355628 HSPA5P11021 654 aaKnown RBP20.16■□□□□ 0.82
FAM208A-201ENST00000355628 SYNJ1O43426 1573 aa20.15■□□□□ 0.82
FAM208A-201ENST00000355628 L1TD1Q5T7N2 865 aaKnown RBP20.15■□□□□ 0.82
FAM208A-201ENST00000355628 SENP3-EIF4A1A0A087X0R7 540 aa20.15■□□□□ 0.82
FAM208A-201ENST00000355628 NAP1L5Q96NT1 182 aaPredicted RBP20.14■□□□□ 0.81
FAM208A-201ENST00000355628 UNC13AQ9UPW8 1703 aa20.14■□□□□ 0.81
FAM208A-201ENST00000355628 PNNQ9H307 717 aaKnown RBP20.13■□□□□ 0.81
FAM208A-201ENST00000355628 CC2D1BQ5T0F9 858 aaKnown RBP20.12■□□□□ 0.81
FAM208A-201ENST00000355628 FRAT1Q92837 279 aaPredicted RBP20.12■□□□□ 0.81
FAM208A-201ENST00000355628 HDGFL2Q7Z4V5 671 aaPredicted RBP20.12■□□□□ 0.81
FAM208A-201ENST00000355628 TOP2BQ02880 1626 aa20.1■□□□□ 0.81
FAM208A-201ENST00000355628 HSP90AB1P08238 724 aaKnown RBP20.1■□□□□ 0.81
FAM208A-201ENST00000355628 RAB3GAP2Q9H2M9 1393 aa20.1■□□□□ 0.81
FAM208A-201ENST00000355628 NEUROD2Q15784 382 aa20.1■□□□□ 0.81
FAM208A-201ENST00000355628 DNTTIP2Q5QJE6 756 aaKnown RBP20.1■□□□□ 0.81
FAM208A-201ENST00000355628 ZRSR1Q15695 479 aaKnown RBP20.09■□□□□ 0.81
FAM208A-201ENST00000355628 TSHZ2Q9NRE2 1034 aa20.09■□□□□ 0.81
FAM208A-201ENST00000355628 TCERG1O14776 1098 aaKnown RBP20.09■□□□□ 0.81
FAM208A-201ENST00000355628 CCDC9Q9Y3X0 531 aaKnown RBP20.09■□□□□ 0.81
FAM208A-201ENST00000355628 CFAP44Q96MT7 982 aa20.08■□□□□ 0.8
FAM208A-201ENST00000355628 HSCBQ8IWL3 235 aa20.07■□□□□ 0.8
FAM208A-201ENST00000355628 AFAP1Q8N556 730 aa20.07■□□□□ 0.8
FAM208A-201ENST00000355628 ABCA10Q8WWZ4 1543 aa20.07■□□□□ 0.8
FAM208A-201ENST00000355628 MAGI1Q96QZ7 1491 aaPredicted RBP20.07■□□□□ 0.8
FAM208A-201ENST00000355628 KTN1Q86UP2 1357 aaKnown RBP20.07■□□□□ 0.8
FAM208A-201ENST00000355628 RTN4Q9NQC3 1192 aaKnown RBP20.07■□□□□ 0.8
FAM208A-201ENST00000355628 KIAA0586Q9BVV6 1533 aa20.07■□□□□ 0.8
FAM208A-201ENST00000355628 CSB-PGBD3P0DP91 1061 aa20.06■□□□□ 0.8
FAM208A-201ENST00000355628 RALBP1Q15311 655 aa20.06■□□□□ 0.8
FAM208A-201ENST00000355628 NGDNQ8NEJ9 315 aaKnown RBP20.05■□□□□ 0.8
FAM208A-201ENST00000355628 MYOM3Q5VTT5 1437 aa20.05■□□□□ 0.8
FAM208A-201ENST00000355628 VGFO15240 615 aaPredicted RBP20.05■□□□□ 0.8
FAM208A-201ENST00000355628 ARHGAP5Q13017 1502 aa20.04■□□□□ 0.8
FAM208A-201ENST00000355628 URB2Q14146 1524 aaKnown RBP20.04■□□□□ 0.8
FAM208A-201ENST00000355628 NPHP1O15259 732 aa20.03■□□□□ 0.8
FAM208A-201ENST00000355628 PEG3Q9GZU2 1588 aa20.03■□□□□ 0.8
FAM208A-201ENST00000355628 U2SURPO15042 1029 aaKnown RBP20.02■□□□□ 0.8
FAM208A-201ENST00000355628 UACAQ9BZF9 1416 aa20.01■□□□□ 0.79
FAM208A-201ENST00000355628 CDK11BP21127 795 aaKnown RBP20.01■□□□□ 0.79
FAM208A-201ENST00000355628 ROCK2O75116 1388 aaKnown RBP20.01■□□□□ 0.79
FAM208A-201ENST00000355628 ZNF644Q9H582 1327 aaPredicted RBP20.01■□□□□ 0.79
FAM208A-201ENST00000355628 NUTM2FA1L443 756 aa20■□□□□ 0.79
FAM208A-201ENST00000355628 RCAN3Q9UKA8 241 aa20■□□□□ 0.79
FAM208A-201ENST00000355628 PTMSP20962 102 aa20■□□□□ 0.79
FAM208A-201ENST00000355628 EIF3AQ14152 1382 aaKnown RBP20■□□□□ 0.79
FAM208A-201ENST00000355628 CCDC144AA2RUR9 1427 aa19.99■□□□□ 0.79
FAM208A-201ENST00000355628 ZNF608Q9ULD9 1512 aaPredicted RBP19.99■□□□□ 0.79
FAM208A-201ENST00000355628 CASKIN1Q8WXD9 1431 aa19.98■□□□□ 0.79
FAM208A-201ENST00000355628 MORC1Q86VD1 984 aa19.98■□□□□ 0.79
FAM208A-201ENST00000355628 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.98■□□□□ 0.79
FAM208A-201ENST00000355628 KIF15Q9NS87 1388 aa19.98■□□□□ 0.79
FAM208A-201ENST00000355628 ERICH3Q5RHP9 1530 aa19.97■□□□□ 0.79
FAM208A-201ENST00000355628 GRIN2AQ12879 1464 aa19.97■□□□□ 0.79
FAM208A-201ENST00000355628 RAPGEF3O95398 923 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms