RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 LRRC9Q6ZRR7 1453 aa12.02□□□□□ -0.49
COMMD9-202ENST00000355500 ADRA2BP18089 450 aa12.01□□□□□ -0.49
COMMD9-202ENST00000355500 WDR7Q9Y4E6 1490 aa12□□□□□ -0.49
COMMD9-202ENST00000355500 ARAP3Q8WWN8 1544 aa11.98□□□□□ -0.49
COMMD9-202ENST00000355500 ABCA9Q8IUA7 1624 aa11.98□□□□□ -0.49
COMMD9-202ENST00000355500 PDE4CQ08493 712 aa11.97□□□□□ -0.49
COMMD9-202ENST00000355500 FAM69CQ0P6D2 419 aa11.97□□□□□ -0.49
COMMD9-202ENST00000355500 TSPOAP1O95153 1857 aa11.96□□□□□ -0.49
COMMD9-202ENST00000355500 CCDC18Q5T9S5 1454 aa11.96□□□□□ -0.49
COMMD9-202ENST00000355500 CFAP74Q9C0B2 1584 aa11.95□□□□□ -0.5
COMMD9-202ENST00000355500 HAP1P54257 671 aaPredicted RBP11.95□□□□□ -0.5
COMMD9-202ENST00000355500 HECW1Q76N89 1606 aa11.94□□□□□ -0.5
COMMD9-202ENST00000355500 CCNB3Q8WWL7 1395 aa11.94□□□□□ -0.5
COMMD9-202ENST00000355500 CHMP4AQ9BY43 222 aa11.94□□□□□ -0.5
COMMD9-202ENST00000355500 EHBP1L1Q8N3D4 1523 aa11.94□□□□□ -0.5
COMMD9-202ENST00000355500 PKNOX2Q96KN3 472 aa11.93□□□□□ -0.5
COMMD9-202ENST00000355500 LRRIQ1Q96JM4 1722 aa11.92□□□□□ -0.5
COMMD9-202ENST00000355500 CCER1Q8TC90 406 aaPredicted RBP11.92□□□□□ -0.5
COMMD9-202ENST00000355500 NEO1Q92859 1461 aa11.92□□□□□ -0.5
COMMD9-202ENST00000355500 FHOD3Q2V2M9 1422 aa11.9□□□□□ -0.5
COMMD9-202ENST00000355500 SUPT6HQ7KZ85 1726 aaKnown RBP11.9□□□□□ -0.5
COMMD9-202ENST00000355500 ZBTB22O15209 634 aa11.9□□□□□ -0.5
COMMD9-202ENST00000355500 RAPGEF6Q8TEU7 1601 aa11.89□□□□□ -0.51
COMMD9-202ENST00000355500 PLCB2Q00722 1185 aa11.89□□□□□ -0.51
COMMD9-202ENST00000355500 TMEM132AQ24JP5 1023 aa11.88□□□□□ -0.51
COMMD9-202ENST00000355500 KANK4Q5T7N3 995 aaPredicted RBP11.88□□□□□ -0.51
COMMD9-202ENST00000355500 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
COMMD9-202ENST00000355500 SCAF1Q9H7N4 1312 aaKnown RBP11.88□□□□□ -0.51
COMMD9-202ENST00000355500 DHX37Q8IY37 1157 aaKnown RBP11.87□□□□□ -0.51
COMMD9-202ENST00000355500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.86□□□□□ -0.51
COMMD9-202ENST00000355500 ZMYM4Q5VZL5 1548 aa11.85□□□□□ -0.51
COMMD9-202ENST00000355500 ADGRL1O94910 1474 aa11.85□□□□□ -0.51
COMMD9-202ENST00000355500 ADAMTSL3P82987 1691 aa11.85□□□□□ -0.51
COMMD9-202ENST00000355500 SAMD1Q6SPF0 538 aaPredicted RBP11.83□□□□□ -0.52
COMMD9-202ENST00000355500 TCOF1Q13428 1488 aaKnown RBP11.83□□□□□ -0.52
COMMD9-202ENST00000355500 CD109Q6YHK3 1445 aa11.82□□□□□ -0.52
COMMD9-202ENST00000355500 DHX57Q6P158 1386 aaKnown RBP11.82□□□□□ -0.52
COMMD9-202ENST00000355500 COL17A1Q9UMD9 1497 aaPredicted RBP11.81□□□□□ -0.52
COMMD9-202ENST00000355500 KDM4FA0A1W2PPD8 638 aa11.81□□□□□ -0.52
COMMD9-202ENST00000355500 NEFLP07196 543 aa11.81□□□□□ -0.52
COMMD9-202ENST00000355500 ATP10BO94823 1461 aa11.81□□□□□ -0.52
COMMD9-202ENST00000355500 MAGI2Q86UL8 1455 aa11.81□□□□□ -0.52
COMMD9-202ENST00000355500 ANO8Q9HCE9 1232 aaPredicted RBP11.8□□□□□ -0.52
COMMD9-202ENST00000355500 FGD6Q6ZV73 1430 aa11.8□□□□□ -0.52
COMMD9-202ENST00000355500 AKNAQ7Z591 1439 aa11.8□□□□□ -0.52
COMMD9-202ENST00000355500 RICTORQ6R327 1708 aa11.79□□□□□ -0.52
COMMD9-202ENST00000355500 CENPBP07199 599 aaPredicted RBP11.79□□□□□ -0.52
COMMD9-202ENST00000355500 MYOM3Q5VTT5 1437 aa11.78□□□□□ -0.52
COMMD9-202ENST00000355500 ARHGEF40Q8TER5 1519 aa11.78□□□□□ -0.52
COMMD9-202ENST00000355500 FRMPD1Q5SYB0 1578 aa11.78□□□□□ -0.52
COMMD9-202ENST00000355500 BCORL1Q5H9F3 1711 aa11.78□□□□□ -0.52
COMMD9-202ENST00000355500 ACIN1Q9UKV3 1341 aaKnown RBP11.78□□□□□ -0.52
COMMD9-202ENST00000355500 GCC2Q8IWJ2 1684 aa11.78□□□□□ -0.52
COMMD9-202ENST00000355500 NCOA2Q15596 1464 aa11.77□□□□□ -0.52
COMMD9-202ENST00000355500 MIA2Q96PC5 1412 aa11.77□□□□□ -0.52
COMMD9-202ENST00000355500 SETD5Q9C0A6 1442 aa11.77□□□□□ -0.52
COMMD9-202ENST00000355500 REREQ9P2R6 1566 aa11.77□□□□□ -0.52
COMMD9-202ENST00000355500 BCL11BQ9C0K0 894 aaPredicted RBP11.77□□□□□ -0.53
COMMD9-202ENST00000355500 PTPN23Q9H3S7 1636 aa11.76□□□□□ -0.53
COMMD9-202ENST00000355500 HNRNPUL2Q1KMD3 747 aaKnown RBP11.75□□□□□ -0.53
COMMD9-202ENST00000355500 NUP153P49790 1475 aaKnown RBP11.74□□□□□ -0.53
COMMD9-202ENST00000355500 MTUS2Q5JR59 1369 aa11.74□□□□□ -0.53
COMMD9-202ENST00000355500 ITSN2Q9NZM3 1697 aa11.73□□□□□ -0.53
COMMD9-202ENST00000355500 TAF7LQ5H9L4 462 aa11.73□□□□□ -0.53
COMMD9-202ENST00000355500 HFM1A2PYH4 1435 aa11.73□□□□□ -0.53
COMMD9-202ENST00000355500 HECW2Q9P2P5 1572 aa11.72□□□□□ -0.53
COMMD9-202ENST00000355500 RAB3GAP2Q9H2M9 1393 aa11.71□□□□□ -0.53
COMMD9-202ENST00000355500 MYO5CQ9NQX4 1742 aa11.69□□□□□ -0.54
COMMD9-202ENST00000355500 BRD2P25440 801 aaKnown RBP11.69□□□□□ -0.54
COMMD9-202ENST00000355500 TTC37Q6PGP7 1564 aa11.68□□□□□ -0.54
COMMD9-202ENST00000355500 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.68□□□□□ -0.54
COMMD9-202ENST00000355500 DNMT1P26358 1616 aaKnown RBP11.67□□□□□ -0.54
COMMD9-202ENST00000355500 ZNF316A6NFI3 1004 aaPredicted RBP11.67□□□□□ -0.54
COMMD9-202ENST00000355500 KDM5CP41229 1560 aa11.66□□□□□ -0.54
COMMD9-202ENST00000355500 DENND4BO75064 1496 aaPredicted RBP11.66□□□□□ -0.54
COMMD9-202ENST00000355500 FANCAO15360 1455 aa11.66□□□□□ -0.54
COMMD9-202ENST00000355500 CNKSR2Q8WXI2 1034 aa11.66□□□□□ -0.54
COMMD9-202ENST00000355500 CROCC2H7BZ55 1655 aa11.65□□□□□ -0.54
COMMD9-202ENST00000355500 ADGBQ8N7X0 1667 aa11.65□□□□□ -0.55
COMMD9-202ENST00000355500 P3H3Q8IVL6 736 aa11.65□□□□□ -0.55
COMMD9-202ENST00000355500 PPP6R1Q9UPN7 881 aa11.65□□□□□ -0.55
COMMD9-202ENST00000355500 ROCK1Q13464 1354 aa11.64□□□□□ -0.55
COMMD9-202ENST00000355500 CDK13Q14004 1512 aaKnown RBP11.64□□□□□ -0.55
COMMD9-202ENST00000355500 POGZQ7Z3K3 1410 aa11.64□□□□□ -0.55
COMMD9-202ENST00000355500 FGD1P98174 961 aa11.64□□□□□ -0.55
COMMD9-202ENST00000355500 ZFYVE16Q7Z3T8 1539 aa11.63□□□□□ -0.55
COMMD9-202ENST00000355500 PLCH2O75038 1416 aa11.63□□□□□ -0.55
COMMD9-202ENST00000355500 TROQ12816 1431 aaPredicted RBP11.63□□□□□ -0.55
COMMD9-202ENST00000355500 PTPRMP28827 1452 aa11.63□□□□□ -0.55
COMMD9-202ENST00000355500 AGLP35573 1532 aa11.63□□□□□ -0.55
COMMD9-202ENST00000355500 ARHGEF12Q9NZN5 1544 aa11.63□□□□□ -0.55
COMMD9-202ENST00000355500 KIF14Q15058 1648 aa11.62□□□□□ -0.55
COMMD9-202ENST00000355500 NAIPQ13075 1403 aa11.62□□□□□ -0.55
COMMD9-202ENST00000355500 FAM135AQ9P2D6 1515 aa11.61□□□□□ -0.55
COMMD9-202ENST00000355500 CDK11BP21127 795 aaKnown RBP11.6□□□□□ -0.55
COMMD9-202ENST00000355500 CDK11AQ9UQ88 783 aaPredicted RBP11.6□□□□□ -0.55
COMMD9-202ENST00000355500 MROH2AA6NES4 1674 aa11.6□□□□□ -0.55
COMMD9-202ENST00000355500 PREX2Q70Z35 1606 aa11.6□□□□□ -0.55
COMMD9-202ENST00000355500 MADDQ8WXG6 1647 aa11.6□□□□□ -0.55
COMMD9-202ENST00000355500 PREX1Q8TCU6 1659 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms