RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 B4GALNT3Q6L9W6 998 aa7.3□□□□□ -1.24
SRGAP1-201ENST00000355086 CREBRFQ8IUR6 639 aa7.3□□□□□ -1.24
SRGAP1-201ENST00000355086 USP35Q9P2H5 1018 aa7.3□□□□□ -1.24
SRGAP1-201ENST00000355086 RASSF8Q8NHQ8 419 aa7.29□□□□□ -1.24
SRGAP1-201ENST00000355086 TMF1P82094 1093 aa7.29□□□□□ -1.24
SRGAP1-201ENST00000355086 HSP90B1P14625 803 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-201ENST00000355086 G3V3G9 751 aa7.29□□□□□ -1.24
SRGAP1-201ENST00000355086 DCAF8Q5TAQ9 597 aa7.29□□□□□ -1.24
SRGAP1-201ENST00000355086 KRI1Q8N9T8 703 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-201ENST00000355086 SYAP1Q96A49 352 aaPredicted RBP7.28□□□□□ -1.24
SRGAP1-201ENST00000355086 MORC1Q86VD1 984 aa7.28□□□□□ -1.24
SRGAP1-201ENST00000355086 PAK3O75914 559 aaPredicted RBP7.28□□□□□ -1.24
SRGAP1-201ENST00000355086 CSB-PGBD3P0DP91 1061 aa7.28□□□□□ -1.24
SRGAP1-201ENST00000355086 GORABQ5T7V8 394 aa7.28□□□□□ -1.24
SRGAP1-201ENST00000355086 TRHP20396 242 aaPredicted RBP7.28□□□□□ -1.24
SRGAP1-201ENST00000355086 MLECQ14165 292 aa7.28□□□□□ -1.24
SRGAP1-201ENST00000355086 CHMP3Q9Y3E7 222 aa7.28□□□□□ -1.24
SRGAP1-201ENST00000355086 DCAF1Q9Y4B6 1507 aa7.27□□□□□ -1.25
SRGAP1-201ENST00000355086 VPS53Q5VIR6 699 aa7.27□□□□□ -1.25
SRGAP1-201ENST00000355086 IPO8O15397 1037 aaKnown RBP7.27□□□□□ -1.25
SRGAP1-201ENST00000355086 MARCH6O60337 910 aa7.26□□□□□ -1.25
SRGAP1-201ENST00000355086 CSPP1Q1MSJ5 1256 aa7.26□□□□□ -1.25
SRGAP1-201ENST00000355086 SAFB2Q14151 953 aaKnown RBP eCLIP7.26□□□□□ -1.25
SRGAP1-201ENST00000355086 ANO8Q9HCE9 1232 aaPredicted RBP7.26□□□□□ -1.25
SRGAP1-201ENST00000355086 CLIP1P30622 1438 aa7.26□□□□□ -1.25
SRGAP1-201ENST00000355086 CCDC9Q9Y3X0 531 aaKnown RBP7.26□□□□□ -1.25
SRGAP1-201ENST00000355086 GZF1Q9H116 711 aaPredicted RBP7.25□□□□□ -1.25
SRGAP1-201ENST00000355086 TPM3P06753 285 aa7.25□□□□□ -1.25
SRGAP1-201ENST00000355086 KANK1Q14678 1352 aa7.25□□□□□ -1.25
SRGAP1-201ENST00000355086 CALD1Q05682 793 aaKnown RBP7.25□□□□□ -1.25
SRGAP1-201ENST00000355086 PES1O00541 588 aaKnown RBP7.25□□□□□ -1.25
SRGAP1-201ENST00000355086 HDGFL2Q7Z4V5 671 aaPredicted RBP7.25□□□□□ -1.25
SRGAP1-201ENST00000355086 SCRIBQ14160 1630 aa7.25□□□□□ -1.25
SRGAP1-201ENST00000355086 SETQ01105 290 aaPredicted RBP7.24□□□□□ -1.25
SRGAP1-201ENST00000355086 FBXO3Q9UK99 471 aa7.24□□□□□ -1.25
SRGAP1-201ENST00000355086 DEKP35659 375 aaKnown RBP7.24□□□□□ -1.25
SRGAP1-201ENST00000355086 ITPRIPQ8IWB1 547 aa7.24□□□□□ -1.25
SRGAP1-201ENST00000355086 STK26Q9P289 416 aa7.24□□□□□ -1.25
SRGAP1-201ENST00000355086 ZCCHC6Q5VYS8 1495 aaKnown RBP7.24□□□□□ -1.25
SRGAP1-201ENST00000355086 FRAT2O75474 233 aaPredicted RBP7.24□□□□□ -1.25
SRGAP1-201ENST00000355086 CHMP4AQ9BY43 222 aa7.23□□□□□ -1.25
SRGAP1-201ENST00000355086 TRIM6-TRIM34B2RNG4 842 aa7.23□□□□□ -1.25
SRGAP1-201ENST00000355086 DCAF11Q8TEB1 546 aa7.23□□□□□ -1.25
SRGAP1-201ENST00000355086 SLKQ9H2G2 1235 aaPredicted RBP7.23□□□□□ -1.25
SRGAP1-201ENST00000355086 TPD52L1Q16890 204 aaPredicted RBP7.23□□□□□ -1.25
SRGAP1-201ENST00000355086 SPAG9O60271 1321 aaKnown RBP7.23□□□□□ -1.25
SRGAP1-201ENST00000355086 PHF14O94880 888 aa7.23□□□□□ -1.25
SRGAP1-201ENST00000355086 TSR1Q2NL82 804 aaKnown RBP7.23□□□□□ -1.25
SRGAP1-201ENST00000355086 SF3A1Q15459 793 aaKnown RBP7.22□□□□□ -1.25
SRGAP1-201ENST00000355086 STK31Q9BXU1 1019 aa7.22□□□□□ -1.25
SRGAP1-201ENST00000355086 CNKSR2Q8WXI2 1034 aa7.22□□□□□ -1.25
SRGAP1-201ENST00000355086 TOMM22Q9NS69 142 aa7.21□□□□□ -1.25
SRGAP1-201ENST00000355086 WWC1Q8IX03 1113 aa7.21□□□□□ -1.26
SRGAP1-201ENST00000355086 U2AF1L5P0DN76 240 aaPredicted RBP7.21□□□□□ -1.26
SRGAP1-201ENST00000355086 GTF2E1P29083 439 aaPredicted RBP7.21□□□□□ -1.26
SRGAP1-201ENST00000355086 U2AF1Q01081 240 aaKnown RBP eCLIP7.21□□□□□ -1.26
SRGAP1-201ENST00000355086 TCEAL9Q9UHQ7 104 aa7.21□□□□□ -1.26
SRGAP1-201ENST00000355086 RWDD1Q9H446 243 aaPredicted RBP7.2□□□□□ -1.26
SRGAP1-201ENST00000355086 HDAC5Q9UQL6 1122 aa7.2□□□□□ -1.26
SRGAP1-201ENST00000355086 TPM2P07951 284 aa7.2□□□□□ -1.26
SRGAP1-201ENST00000355086 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.2□□□□□ -1.26
SRGAP1-201ENST00000355086 MFAP1P55081 439 aaKnown RBP7.2□□□□□ -1.26
SRGAP1-201ENST00000355086 KIF16BQ96L93 1317 aa7.2□□□□□ -1.26
SRGAP1-201ENST00000355086 H3BQV1 296 aa7.2□□□□□ -1.26
SRGAP1-201ENST00000355086 IFFO2Q5TF58 517 aa7.2□□□□□ -1.26
SRGAP1-201ENST00000355086 GOLGA6L3A6NEY3 463 aa7.19□□□□□ -1.26
SRGAP1-201ENST00000355086 TPM1P09493 284 aa7.19□□□□□ -1.26
SRGAP1-201ENST00000355086 HMMRO75330 724 aa7.19□□□□□ -1.26
SRGAP1-201ENST00000355086 PMFBP1Q8TBY8 1022 aa7.19□□□□□ -1.26
SRGAP1-201ENST00000355086 NOL8Q76FK4 1167 aaKnown RBP7.19□□□□□ -1.26
SRGAP1-201ENST00000355086 CCAR2Q8N163 923 aaKnown RBP7.19□□□□□ -1.26
SRGAP1-201ENST00000355086 SIN3AQ96ST3 1273 aa7.19□□□□□ -1.26
SRGAP1-201ENST00000355086 AKAP17AQ02040 695 aaKnown RBP7.19□□□□□ -1.26
SRGAP1-201ENST00000355086 KIF3AQ9Y496 699 aa7.19□□□□□ -1.26
SRGAP1-201ENST00000355086 PATL2C9JE40 543 aaKnown RBP7.19□□□□□ -1.26
SRGAP1-201ENST00000355086 SLC4A10Q6U841 1118 aa7.19□□□□□ -1.26
SRGAP1-201ENST00000355086 CCDC70Q6NSX1 233 aa7.18□□□□□ -1.26
SRGAP1-201ENST00000355086 CALRP27797 417 aaKnown RBP7.17□□□□□ -1.26
SRGAP1-201ENST00000355086 FAM184AQ8NB25 1140 aa7.17□□□□□ -1.26
SRGAP1-201ENST00000355086 ST18O60284 1047 aa7.17□□□□□ -1.26
SRGAP1-201ENST00000355086 GGT6Q6P531 493 aa7.17□□□□□ -1.26
SRGAP1-201ENST00000355086 GPS2Q13227 327 aa7.17□□□□□ -1.26
SRGAP1-201ENST00000355086 TRIM34Q9BYJ4 488 aa7.17□□□□□ -1.26
SRGAP1-201ENST00000355086 CTDP1Q9Y5B0 961 aaPredicted RBP7.17□□□□□ -1.26
SRGAP1-201ENST00000355086 GOLGA6L19H0YKK7 550 aa7.17□□□□□ -1.26
SRGAP1-201ENST00000355086 FOXD4L1Q9NU39 408 aa7.17□□□□□ -1.26
SRGAP1-201ENST00000355086 SMC4Q9NTJ3 1288 aa7.17□□□□□ -1.26
SRGAP1-201ENST00000355086 FOXD4L5Q5VV16 416 aaPredicted RBP7.17□□□□□ -1.26
SRGAP1-201ENST00000355086 FOXD4L4Q8WXT5 416 aaPredicted RBP7.17□□□□□ -1.26
SRGAP1-201ENST00000355086 KTN1Q86UP2 1357 aaKnown RBP7.17□□□□□ -1.26
SRGAP1-201ENST00000355086 RCAN3Q9UKA8 241 aa7.17□□□□□ -1.26
SRGAP1-201ENST00000355086 RRP12Q5JTH9 1297 aaKnown RBP7.16□□□□□ -1.26
SRGAP1-201ENST00000355086 BECN2A8MW95 431 aa7.15□□□□□ -1.26
SRGAP1-201ENST00000355086 TCERG1O14776 1098 aaKnown RBP7.15□□□□□ -1.26
SRGAP1-201ENST00000355086 PCMTD1Q96MG8 357 aaPredicted RBP7.15□□□□□ -1.26
SRGAP1-201ENST00000355086 RAD21O60216 631 aa7.15□□□□□ -1.27
SRGAP1-201ENST00000355086 CCNB3Q8WWL7 1395 aa7.15□□□□□ -1.27
SRGAP1-201ENST00000355086 SYNE3Q6ZMZ3 975 aa7.15□□□□□ -1.27
SRGAP1-201ENST00000355086 AMOTL1Q8IY63 956 aa7.14□□□□□ -1.27
SRGAP1-201ENST00000355086 GOLGA3Q08378 1498 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms