RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 DAPK1P53355 1430 aa13.41□□□□□ -0.26
RPE-201ENST00000354506 ANKRD30BQ9BXX2 1392 aa13.41□□□□□ -0.26
RPE-201ENST00000354506 HSPA5P11021 654 aaKnown RBP13.41□□□□□ -0.26
RPE-201ENST00000354506 BCL11AQ9H165 835 aa13.41□□□□□ -0.26
RPE-201ENST00000354506 KIAA0586Q9BVV6 1533 aa13.4□□□□□ -0.26
RPE-201ENST00000354506 ABCC5O15440 1437 aa13.4□□□□□ -0.26
RPE-201ENST00000354506 RPRD2Q5VT52 1461 aaKnown RBP13.4□□□□□ -0.26
RPE-201ENST00000354506 NUP153P49790 1475 aaKnown RBP13.39□□□□□ -0.27
RPE-201ENST00000354506 TEX14Q8IWB6 1497 aa13.39□□□□□ -0.27
RPE-201ENST00000354506 POLR3GLQ9BT43 218 aa13.39□□□□□ -0.27
RPE-201ENST00000354506 NCOA1Q15788 1441 aa13.39□□□□□ -0.27
RPE-201ENST00000354506 IFT140Q96RY7 1462 aa13.38□□□□□ -0.27
RPE-201ENST00000354506 SPATA31E1Q6ZUB1 1445 aa13.38□□□□□ -0.27
RPE-201ENST00000354506 POLR1AO95602 1720 aaPredicted RBP13.38□□□□□ -0.27
RPE-201ENST00000354506 ZNF608Q9ULD9 1512 aaPredicted RBP13.38□□□□□ -0.27
RPE-201ENST00000354506 FOXD1Q16676 465 aa13.37□□□□□ -0.27
RPE-201ENST00000354506 L3MBTL2Q969R5 705 aa13.37□□□□□ -0.27
RPE-201ENST00000354506 RAPGEF6Q8TEU7 1601 aa13.37□□□□□ -0.27
RPE-201ENST00000354506 CNTLNQ9NXG0 1405 aa13.36□□□□□ -0.27
RPE-201ENST00000354506 C11orf95C9JLR9 678 aaPredicted RBP13.36□□□□□ -0.27
RPE-201ENST00000354506 EIF4G2P78344 907 aaKnown RBP eCLIP13.36□□□□□ -0.27
RPE-201ENST00000354506 FAM9BQ8IZU0 186 aa13.36□□□□□ -0.27
RPE-201ENST00000354506 MSH5O43196 834 aa13.35□□□□□ -0.27
RPE-201ENST00000354506 CCDC184Q52MB2 194 aa13.35□□□□□ -0.27
RPE-201ENST00000354506 NBPF8Q3BBV2 869 aa13.33□□□□□ -0.28
RPE-201ENST00000354506 ADCY10Q96PN6 1610 aa13.33□□□□□ -0.28
RPE-201ENST00000354506 CCDC7Q96M83 1385 aa13.33□□□□□ -0.28
RPE-201ENST00000354506 GRIN2AQ12879 1464 aa13.32□□□□□ -0.28
RPE-201ENST00000354506 PZPP20742 1482 aa13.32□□□□□ -0.28
RPE-201ENST00000354506 ZNF644Q9H582 1327 aaPredicted RBP13.31□□□□□ -0.28
RPE-201ENST00000354506 MBD5Q9P267 1494 aa13.31□□□□□ -0.28
RPE-201ENST00000354506 ADGRL2O95490 1459 aa13.3□□□□□ -0.28
RPE-201ENST00000354506 ERICH6Q7L0X2 663 aa13.3□□□□□ -0.28
RPE-201ENST00000354506 CROCC2H7BZ55 1655 aa13.3□□□□□ -0.28
RPE-201ENST00000354506 ADGBQ8N7X0 1667 aa13.3□□□□□ -0.28
RPE-201ENST00000354506 EIF4G3O43432 1585 aaKnown RBP13.3□□□□□ -0.28
RPE-201ENST00000354506 B4GALNT3Q6L9W6 998 aa13.3□□□□□ -0.28
RPE-201ENST00000354506 PRKRIP1Q9H875 184 aaPredicted RBP13.29□□□□□ -0.28
RPE-201ENST00000354506 TROQ12816 1431 aaPredicted RBP13.28□□□□□ -0.28
RPE-201ENST00000354506 GPATCH8Q9UKJ3 1502 aaKnown RBP13.28□□□□□ -0.28
RPE-201ENST00000354506 ITSN2Q9NZM3 1697 aa13.28□□□□□ -0.28
RPE-201ENST00000354506 CAMSAP2Q08AD1 1489 aa13.28□□□□□ -0.28
RPE-201ENST00000354506 CEP170Q5SW79 1584 aa13.27□□□□□ -0.29
RPE-201ENST00000354506 PRG4Q92954 1404 aaPredicted RBP13.27□□□□□ -0.29
RPE-201ENST00000354506 ZNF326Q5BKZ1 582 aaKnown RBP13.26□□□□□ -0.29
RPE-201ENST00000354506 ERICH6BQ5W0A0 696 aa13.26□□□□□ -0.29
RPE-201ENST00000354506 KIF7Q2M1P5 1343 aa13.25□□□□□ -0.29
RPE-201ENST00000354506 MAGI1Q96QZ7 1491 aaPredicted RBP13.25□□□□□ -0.29
RPE-201ENST00000354506 KIF14Q15058 1648 aa13.25□□□□□ -0.29
RPE-201ENST00000354506 CDK11AQ9UQ88 783 aaPredicted RBP13.24□□□□□ -0.29
RPE-201ENST00000354506 PLB1Q6P1J6 1458 aa13.23□□□□□ -0.29
RPE-201ENST00000354506 SLC4A1APQ9BWU0 796 aaKnown RBP13.23□□□□□ -0.29
RPE-201ENST00000354506 BCORL1Q5H9F3 1711 aa13.23□□□□□ -0.29
RPE-201ENST00000354506 KIAA1107Q9UPP5 1409 aa13.22□□□□□ -0.29
RPE-201ENST00000354506 NBR1Q14596 966 aa13.22□□□□□ -0.29
RPE-201ENST00000354506 DHX29Q7Z478 1369 aaKnown RBP13.22□□□□□ -0.29
RPE-201ENST00000354506 SYNJ2O15056 1496 aa13.22□□□□□ -0.29
RPE-201ENST00000354506 KDM5CP41229 1560 aa13.21□□□□□ -0.3
RPE-201ENST00000354506 ZBED9Q6R2W3 1325 aa13.21□□□□□ -0.3
RPE-201ENST00000354506 NUP160Q12769 1436 aa13.2□□□□□ -0.3
RPE-201ENST00000354506 UHRF1BP1Q6BDS2 1440 aa13.2□□□□□ -0.3
RPE-201ENST00000354506 CDC42BPAQ5VT25 1732 aa13.2□□□□□ -0.3
RPE-201ENST00000354506 ABCC10Q5T3U5 1492 aa13.19□□□□□ -0.3
RPE-201ENST00000354506 MRS2Q9HD23 443 aa13.19□□□□□ -0.3
RPE-201ENST00000354506 ABCA8O94911 1581 aa13.19□□□□□ -0.3
RPE-201ENST00000354506 KDM5DQ9BY66 1539 aa13.19□□□□□ -0.3
RPE-201ENST00000354506 CFDP1Q9UEE9 299 aaPredicted RBP13.19□□□□□ -0.3
RPE-201ENST00000354506 SHANK2Q9UPX8 1470 aa13.18□□□□□ -0.3
RPE-201ENST00000354506 SALL2Q9Y467 1007 aaPredicted RBP13.18□□□□□ -0.3
RPE-201ENST00000354506 ARID4BQ4LE39 1312 aaPredicted RBP13.17□□□□□ -0.3
RPE-201ENST00000354506 ANKRD30AQ9BXX3 1397 aa13.16□□□□□ -0.3
RPE-201ENST00000354506 PTPRGP23470 1445 aa13.15□□□□□ -0.3
RPE-201ENST00000354506 ANKRD50Q9ULJ7 1429 aa13.15□□□□□ -0.3
RPE-201ENST00000354506 ARHGEF12Q9NZN5 1544 aa13.14□□□□□ -0.31
RPE-201ENST00000354506 PPP4R2Q9NY27 417 aa13.14□□□□□ -0.31
RPE-201ENST00000354506 ATP10BO94823 1461 aa13.14□□□□□ -0.31
RPE-201ENST00000354506 RALGAPBQ86X10 1494 aa13.14□□□□□ -0.31
RPE-201ENST00000354506 FANCIQ9NVI1 1328 aa13.14□□□□□ -0.31
RPE-201ENST00000354506 USP47Q96K76 1375 aa13.13□□□□□ -0.31
RPE-201ENST00000354506 CARMIL2Q6F5E8 1435 aa13.13□□□□□ -0.31
RPE-201ENST00000354506 JPH4Q96JJ6 628 aa13.13□□□□□ -0.31
RPE-201ENST00000354506 PKD2Q13563 968 aa13.12□□□□□ -0.31
RPE-201ENST00000354506 ARHGEF5Q12774 1597 aa13.12□□□□□ -0.31
RPE-201ENST00000354506 RNF123Q5XPI4 1314 aa13.12□□□□□ -0.31
RPE-201ENST00000354506 SMG6Q86US8 1419 aaKnown RBP13.11□□□□□ -0.31
RPE-201ENST00000354506 CHMP7Q8WUX9 453 aaPredicted RBP13.11□□□□□ -0.31
RPE-201ENST00000354506 C9orf84Q5VXU9 1444 aa13.1□□□□□ -0.31
RPE-201ENST00000354506 E9PCH4 1651 aa13.09□□□□□ -0.31
RPE-201ENST00000354506 PAK3O75914 559 aaPredicted RBP13.08□□□□□ -0.32
RPE-201ENST00000354506 ROCK2O75116 1388 aaKnown RBP13.07□□□□□ -0.32
RPE-201ENST00000354506 NPM2Q86SE8 214 aaKnown RBP13.07□□□□□ -0.32
RPE-201ENST00000354506 ZNF777Q9ULD5 760 aaPredicted RBP13.06□□□□□ -0.32
RPE-201ENST00000354506 NUP155O75694 1391 aa13.06□□□□□ -0.32
RPE-201ENST00000354506 CDC42BPBQ9Y5S2 1711 aa13.06□□□□□ -0.32
RPE-201ENST00000354506 PLEKHD1A6NEE1 506 aa13.06□□□□□ -0.32
RPE-201ENST00000354506 PNISRQ8TF01 805 aaKnown RBP13.06□□□□□ -0.32
RPE-201ENST00000354506 LRPPRCP42704 1394 aaKnown RBP13.05□□□□□ -0.32
RPE-201ENST00000354506 SAMD9LQ8IVG5 1584 aa13.04□□□□□ -0.32
RPE-201ENST00000354506 PREX2Q70Z35 1606 aa13.03□□□□□ -0.32
RPE-201ENST00000354506 ERCC6Q03468 1493 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms