RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ARID3CA6NKF2 412 aa10.23□□□□□ -0.77
TRIM55-203ENST00000350034 AKNAQ7Z591 1439 aa10.23□□□□□ -0.77
TRIM55-203ENST00000350034 ADCY10Q96PN6 1610 aa10.22□□□□□ -0.77
TRIM55-203ENST00000350034 MAPKBP1O60336 1514 aa10.22□□□□□ -0.77
TRIM55-203ENST00000350034 NAIPQ13075 1403 aa10.21□□□□□ -0.78
TRIM55-203ENST00000350034 UACAQ9BZF9 1416 aa10.21□□□□□ -0.78
TRIM55-203ENST00000350034 GPATCH8Q9UKJ3 1502 aaKnown RBP10.19□□□□□ -0.78
TRIM55-203ENST00000350034 ABCC10Q5T3U5 1492 aa10.19□□□□□ -0.78
TRIM55-203ENST00000350034 ROCK1Q13464 1354 aa10.18□□□□□ -0.78
TRIM55-203ENST00000350034 PLEKHD1A6NEE1 506 aa10.18□□□□□ -0.78
TRIM55-203ENST00000350034 ABCC5O15440 1437 aa10.17□□□□□ -0.78
TRIM55-203ENST00000350034 DAPK1P53355 1430 aa10.16□□□□□ -0.78
TRIM55-203ENST00000350034 KIF14Q15058 1648 aa10.16□□□□□ -0.78
TRIM55-203ENST00000350034 ABCC2Q92887 1545 aa10.16□□□□□ -0.78
TRIM55-203ENST00000350034 UHRF1BP1LA0JNW5 1464 aa10.16□□□□□ -0.78
TRIM55-203ENST00000350034 DNMT1P26358 1616 aaKnown RBP10.15□□□□□ -0.78
TRIM55-203ENST00000350034 ZNF644Q9H582 1327 aaPredicted RBP10.15□□□□□ -0.78
TRIM55-203ENST00000350034 ZNF316A6NFI3 1004 aaPredicted RBP10.14□□□□□ -0.79
TRIM55-203ENST00000350034 CFDP1Q9UEE9 299 aaPredicted RBP10.14□□□□□ -0.79
TRIM55-203ENST00000350034 ITSN2Q9NZM3 1697 aa10.14□□□□□ -0.79
TRIM55-203ENST00000350034 ACIN1Q9UKV3 1341 aaKnown RBP10.13□□□□□ -0.79
TRIM55-203ENST00000350034 GCC2Q8IWJ2 1684 aa10.13□□□□□ -0.79
TRIM55-203ENST00000350034 CAMSAP2Q08AD1 1489 aa10.13□□□□□ -0.79
TRIM55-203ENST00000350034 TIMELESSQ9UNS1 1208 aa10.13□□□□□ -0.79
TRIM55-203ENST00000350034 ADGRL1O94910 1474 aa10.12□□□□□ -0.79
TRIM55-203ENST00000350034 RRP7BPQ9NSQ0 103 aa10.12□□□□□ -0.79
TRIM55-203ENST00000350034 ADGRL2O95490 1459 aa10.11□□□□□ -0.79
TRIM55-203ENST00000350034 CHIC2Q9UKJ5 165 aa10.11□□□□□ -0.79
TRIM55-203ENST00000350034 KDM5BQ9UGL1 1544 aa10.11□□□□□ -0.79
TRIM55-203ENST00000350034 KIF13AQ9H1H9 1805 aa10.09□□□□□ -0.79
TRIM55-203ENST00000350034 DENND4BO75064 1496 aaPredicted RBP10.09□□□□□ -0.79
TRIM55-203ENST00000350034 NCOA1Q15788 1441 aa10.08□□□□□ -0.8
TRIM55-203ENST00000350034 CDC42BPAQ5VT25 1732 aa10.08□□□□□ -0.8
TRIM55-203ENST00000350034 SIN3AQ96ST3 1273 aa10.08□□□□□ -0.8
TRIM55-203ENST00000350034 SHANK2Q9UPX8 1470 aa10.08□□□□□ -0.8
TRIM55-203ENST00000350034 KDM6BO15054 1643 aa10.07□□□□□ -0.8
TRIM55-203ENST00000350034 MBD5Q9P267 1494 aa10.07□□□□□ -0.8
TRIM55-203ENST00000350034 ARHGEF5Q12774 1597 aa10.06□□□□□ -0.8
TRIM55-203ENST00000350034 DIEXFQ68CQ4 756 aaKnown RBP10.06□□□□□ -0.8
TRIM55-203ENST00000350034 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.06□□□□□ -0.8
TRIM55-203ENST00000350034 PREX2Q70Z35 1606 aa10.05□□□□□ -0.8
TRIM55-203ENST00000350034 RSPH4AQ5TD94 716 aa10.05□□□□□ -0.8
TRIM55-203ENST00000350034 ZNF777Q9ULD5 760 aaPredicted RBP10.05□□□□□ -0.8
TRIM55-203ENST00000350034 CROCC2H7BZ55 1655 aa10.05□□□□□ -0.8
TRIM55-203ENST00000350034 ZCCHC11Q5TAX3 1644 aaKnown RBP10.04□□□□□ -0.8
TRIM55-203ENST00000350034 ANKRD30AQ9BXX3 1397 aa10.04□□□□□ -0.8
TRIM55-203ENST00000350034 MPHOSPH9Q99550 1183 aa10.04□□□□□ -0.8
TRIM55-203ENST00000350034 PPP1R15AO75807 674 aaPredicted RBP10.03□□□□□ -0.8
TRIM55-203ENST00000350034 C9orf84Q5VXU9 1444 aa10.03□□□□□ -0.8
TRIM55-203ENST00000350034 TTC37Q6PGP7 1564 aa10.03□□□□□ -0.8
TRIM55-203ENST00000350034 SAMD9LQ8IVG5 1584 aa10.03□□□□□ -0.8
TRIM55-203ENST00000350034 KIAA1107Q9UPP5 1409 aa10.03□□□□□ -0.8
TRIM55-203ENST00000350034 ADGBQ8N7X0 1667 aa10.02□□□□□ -0.8
TRIM55-203ENST00000350034 PLCH2O75038 1416 aa10.02□□□□□ -0.81
TRIM55-203ENST00000350034 NEUROD1Q13562 356 aa10.02□□□□□ -0.81
TRIM55-203ENST00000350034 PLEKHH2Q8IVE3 1493 aa10.02□□□□□ -0.81
TRIM55-203ENST00000350034 CDC42BPBQ9Y5S2 1711 aa10.02□□□□□ -0.81
TRIM55-203ENST00000350034 TRIM52Q96A61 297 aa10.01□□□□□ -0.81
TRIM55-203ENST00000350034 CCDC141Q6ZP82 1450 aa10.01□□□□□ -0.81
TRIM55-203ENST00000350034 ANKRD50Q9ULJ7 1429 aa10□□□□□ -0.81
TRIM55-203ENST00000350034 PZPP20742 1482 aa10□□□□□ -0.81
TRIM55-203ENST00000350034 HNRNPMP52272 730 aaKnown RBP eCLIP10□□□□□ -0.81
TRIM55-203ENST00000350034 ARAP3Q8WWN8 1544 aa10□□□□□ -0.81
TRIM55-203ENST00000350034 MAST1Q9Y2H9 1570 aa10□□□□□ -0.81
TRIM55-203ENST00000350034 ANKRD30BQ9BXX2 1392 aa10□□□□□ -0.81
TRIM55-203ENST00000350034 TSPY4P0CV99 314 aa9.99□□□□□ -0.81
TRIM55-203ENST00000350034 TSPY10P0CW01 314 aa9.99□□□□□ -0.81
TRIM55-203ENST00000350034 WDR7Q9Y4E6 1490 aa9.98□□□□□ -0.81
TRIM55-203ENST00000350034 ARHGAP5Q13017 1502 aa9.98□□□□□ -0.81
TRIM55-203ENST00000350034 TONSLQ96HA7 1378 aa9.98□□□□□ -0.81
TRIM55-203ENST00000350034 KDM5DQ9BY66 1539 aa9.97□□□□□ -0.81
TRIM55-203ENST00000350034 EFCAB2Q5VUJ9 269 aa9.97□□□□□ -0.81
TRIM55-203ENST00000350034 KCNH8Q96L42 1107 aa9.97□□□□□ -0.81
TRIM55-203ENST00000350034 KIF15Q9NS87 1388 aa9.97□□□□□ -0.81
TRIM55-203ENST00000350034 SYCP2Q9BX26 1530 aa9.97□□□□□ -0.81
TRIM55-203ENST00000350034 ARHGEF12Q9NZN5 1544 aa9.97□□□□□ -0.81
TRIM55-203ENST00000350034 MYO5CQ9NQX4 1742 aa9.96□□□□□ -0.81
TRIM55-203ENST00000350034 SLC4A1APQ9BWU0 796 aaKnown RBP9.95□□□□□ -0.82
TRIM55-203ENST00000350034 RPRD2Q5VT52 1461 aaKnown RBP9.95□□□□□ -0.82
TRIM55-203ENST00000350034 ABCC1P33527 1531 aa9.94□□□□□ -0.82
TRIM55-203ENST00000350034 ASXL2Q76L83 1435 aa9.94□□□□□ -0.82
TRIM55-203ENST00000350034 ABCA9Q8IUA7 1624 aa9.93□□□□□ -0.82
TRIM55-203ENST00000350034 PLXNC1O60486 1568 aa9.93□□□□□ -0.82
TRIM55-203ENST00000350034 TEX14Q8IWB6 1497 aa9.92□□□□□ -0.82
TRIM55-203ENST00000350034 RTEL1-TNFRSF6BF6WH68 1400 aa9.91□□□□□ -0.82
TRIM55-203ENST00000350034 TRAPPC8Q9Y2L5 1435 aa9.91□□□□□ -0.82
TRIM55-203ENST00000350034 NUP155O75694 1391 aa9.91□□□□□ -0.82
TRIM55-203ENST00000350034 PKD2Q13563 968 aa9.9□□□□□ -0.82
TRIM55-203ENST00000350034 MIER1Q8N108 512 aa9.9□□□□□ -0.82
TRIM55-203ENST00000350034 L3MBTL2Q969R5 705 aa9.9□□□□□ -0.82
TRIM55-203ENST00000350034 DUOX2Q9NRD8 1548 aa9.9□□□□□ -0.82
TRIM55-203ENST00000350034 UNC13BO14795 1591 aa9.89□□□□□ -0.83
TRIM55-203ENST00000350034 ERBINQ96RT1 1412 aa9.89□□□□□ -0.83
TRIM55-203ENST00000350034 FANCAO15360 1455 aa9.88□□□□□ -0.83
TRIM55-203ENST00000350034 MAGI2Q86UL8 1455 aa9.88□□□□□ -0.83
TRIM55-203ENST00000350034 NPM1P06748 294 aaKnown RBP eCLIP9.87□□□□□ -0.83
TRIM55-203ENST00000350034 FAM135AQ9P2D6 1515 aa9.87□□□□□ -0.83
TRIM55-203ENST00000350034 ZFYVE16Q7Z3T8 1539 aa9.86□□□□□ -0.83
TRIM55-203ENST00000350034 SPAG9O60271 1321 aaKnown RBP9.85□□□□□ -0.83
TRIM55-203ENST00000350034 AFAP1Q8N556 730 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms