RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 TTC37Q6PGP7 1564 aa19.76■□□□□ 0.75
UBA3-201ENST00000349511 DIEXFQ68CQ4 756 aaKnown RBP19.75■□□□□ 0.75
UBA3-201ENST00000349511 NPM1P06748 294 aaKnown RBP eCLIP19.74■□□□□ 0.75
UBA3-201ENST00000349511 DHX57Q6P158 1386 aaKnown RBP19.74■□□□□ 0.75
UBA3-201ENST00000349511 DAPK1P53355 1430 aa19.73■□□□□ 0.75
UBA3-201ENST00000349511 ABCC5O15440 1437 aa19.72■□□□□ 0.75
UBA3-201ENST00000349511 CDC42BPBQ9Y5S2 1711 aa19.71■□□□□ 0.75
UBA3-201ENST00000349511 HNRNPMP52272 730 aaKnown RBP eCLIP19.71■□□□□ 0.752e-8■■□□□ 13
UBA3-201ENST00000349511 RIMBP3CA6NJZ7 1639 aa19.7■□□□□ 0.74
UBA3-201ENST00000349511 RIMBP3BA6NNM3 1639 aa19.7■□□□□ 0.74
UBA3-201ENST00000349511 RIMBP3Q9UFD9 1639 aa19.7■□□□□ 0.74
UBA3-201ENST00000349511 HFM1A2PYH4 1435 aa19.69■□□□□ 0.74
UBA3-201ENST00000349511 NAIPQ13075 1403 aa19.69■□□□□ 0.74
UBA3-201ENST00000349511 ASXL2Q76L83 1435 aa19.69■□□□□ 0.74
UBA3-201ENST00000349511 WDR7Q9Y4E6 1490 aa19.69■□□□□ 0.74
UBA3-201ENST00000349511 DNMT1P26358 1616 aaKnown RBP19.69■□□□□ 0.74
UBA3-201ENST00000349511 PREX2Q70Z35 1606 aa19.68■□□□□ 0.74
UBA3-201ENST00000349511 ARHGAP5Q13017 1502 aa19.67■□□□□ 0.74
UBA3-201ENST00000349511 ACIN1Q9UKV3 1341 aaKnown RBP19.66■□□□□ 0.74
UBA3-201ENST00000349511 MYO5CQ9NQX4 1742 aa19.65■□□□□ 0.74
UBA3-201ENST00000349511 SAMD9LQ8IVG5 1584 aa19.64■□□□□ 0.73
UBA3-201ENST00000349511 KDM6BO15054 1643 aa19.61■□□□□ 0.73
UBA3-201ENST00000349511 NEUROD1Q13562 356 aa19.61■□□□□ 0.73
UBA3-201ENST00000349511 PLCH2O75038 1416 aa19.61■□□□□ 0.73
UBA3-201ENST00000349511 AKNAQ7Z591 1439 aa19.61■□□□□ 0.73
UBA3-201ENST00000349511 ZNF316A6NFI3 1004 aaPredicted RBP19.6■□□□□ 0.73
UBA3-201ENST00000349511 TSPY4P0CV99 314 aa19.6■□□□□ 0.73
UBA3-201ENST00000349511 TSPY10P0CW01 314 aa19.6■□□□□ 0.73
UBA3-201ENST00000349511 EFCAB2Q5VUJ9 269 aa19.58■□□□□ 0.73
UBA3-201ENST00000349511 TRIM52Q96A61 297 aa19.58■□□□□ 0.73
UBA3-201ENST00000349511 SYCP2Q9BX26 1530 aa19.58■□□□□ 0.73
UBA3-201ENST00000349511 MBD5Q9P267 1494 aa19.58■□□□□ 0.73
UBA3-201ENST00000349511 GCC2Q8IWJ2 1684 aa19.57■□□□□ 0.72
UBA3-201ENST00000349511 ROCK1Q13464 1354 aa19.57■□□□□ 0.72
UBA3-201ENST00000349511 CROCC2H7BZ55 1655 aa19.57■□□□□ 0.72
UBA3-201ENST00000349511 NCOA1Q15788 1441 aa19.56■□□□□ 0.72
UBA3-201ENST00000349511 C9orf84Q5VXU9 1444 aa19.55■□□□□ 0.72
UBA3-201ENST00000349511 MAPKBP1O60336 1514 aa19.54■□□□□ 0.72
UBA3-201ENST00000349511 ARHGEF12Q9NZN5 1544 aa19.53■□□□□ 0.72
UBA3-201ENST00000349511 PELP1Q8IZL8 1130 aaKnown RBP19.53■□□□□ 0.72
UBA3-201ENST00000349511 ABCA9Q8IUA7 1624 aa19.53■□□□□ 0.72
UBA3-201ENST00000349511 ANKRD30AQ9BXX3 1397 aa19.52■□□□□ 0.72
UBA3-201ENST00000349511 CCDC141Q6ZP82 1450 aa19.52■□□□□ 0.72
UBA3-201ENST00000349511 CLSPNQ9HAW4 1339 aa19.52■□□□□ 0.72
UBA3-201ENST00000349511 ADGBQ8N7X0 1667 aa19.52■□□□□ 0.72
UBA3-201ENST00000349511 CENPBP07199 599 aaPredicted RBP19.51■□□□□ 0.71
UBA3-201ENST00000349511 SIN3AQ96ST3 1273 aa19.51■□□□□ 0.71
UBA3-201ENST00000349511 ARHGEF5Q12774 1597 aa19.51■□□□□ 0.71
UBA3-201ENST00000349511 FANCAO15360 1455 aa19.5■□□□□ 0.71
UBA3-201ENST00000349511 ADGRL2O95490 1459 aa19.49■□□□□ 0.71
UBA3-201ENST00000349511 RSPH4AQ5TD94 716 aa19.49■□□□□ 0.71
UBA3-201ENST00000349511 AFAP1Q8N556 730 aa19.48■□□□□ 0.71
UBA3-201ENST00000349511 KIAA1107Q9UPP5 1409 aa19.48■□□□□ 0.71
UBA3-201ENST00000349511 TRAPPC8Q9Y2L5 1435 aa19.48■□□□□ 0.71
UBA3-201ENST00000349511 SHANK2Q9UPX8 1470 aa19.48■□□□□ 0.71
UBA3-201ENST00000349511 CD109Q6YHK3 1445 aa19.47■□□□□ 0.71
UBA3-201ENST00000349511 PLEKHH2Q8IVE3 1493 aa19.46■□□□□ 0.71
UBA3-201ENST00000349511 ABCC1P33527 1531 aa19.46■□□□□ 0.71
UBA3-201ENST00000349511 KIF15Q9NS87 1388 aa19.46■□□□□ 0.71
UBA3-201ENST00000349511 FOXD1Q16676 465 aa19.45■□□□□ 0.7
UBA3-201ENST00000349511 ANKRD50Q9ULJ7 1429 aa19.44■□□□□ 0.7
UBA3-201ENST00000349511 MPHOSPH9Q99550 1183 aa19.43■□□□□ 0.7
UBA3-201ENST00000349511 ARAP3Q8WWN8 1544 aa19.43■□□□□ 0.7
UBA3-201ENST00000349511 MYT1LQ9UL68 1186 aa19.42■□□□□ 0.7
UBA3-201ENST00000349511 GTF3C3Q9Y5Q9 886 aa19.42■□□□□ 0.7
UBA3-201ENST00000349511 ADGRL1O94910 1474 aa19.41■□□□□ 0.7
UBA3-201ENST00000349511 SCAPERQ9BY12 1400 aa19.41■□□□□ 0.7
UBA3-201ENST00000349511 FAM69CQ0P6D2 419 aa19.4■□□□□ 0.7
UBA3-201ENST00000349511 SLC4A1APQ9BWU0 796 aaKnown RBP19.4■□□□□ 0.7
UBA3-201ENST00000349511 DENND4BO75064 1496 aaPredicted RBP19.4■□□□□ 0.7
UBA3-201ENST00000349511 SPAG9O60271 1321 aaKnown RBP19.38■□□□□ 0.69
UBA3-201ENST00000349511 MAST1Q9Y2H9 1570 aa19.36■□□□□ 0.69
UBA3-201ENST00000349511 NUP155O75694 1391 aa19.34■□□□□ 0.69
UBA3-201ENST00000349511 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.33■□□□□ 0.69
UBA3-201ENST00000349511 PZPP20742 1482 aa19.32■□□□□ 0.68
UBA3-201ENST00000349511 MIER1Q8N108 512 aa19.31■□□□□ 0.68
UBA3-201ENST00000349511 RAPGEF3O95398 923 aa19.31■□□□□ 0.68
UBA3-201ENST00000349511 TSPOAP1O95153 1857 aa19.3■□□□□ 0.68
UBA3-201ENST00000349511 PLXNC1O60486 1568 aa19.3■□□□□ 0.68
UBA3-201ENST00000349511 DIP2BQ9P265 1576 aa19.3■□□□□ 0.68
UBA3-201ENST00000349511 PKD2Q13563 968 aa19.3■□□□□ 0.68
UBA3-201ENST00000349511 ZFYVE16Q7Z3T8 1539 aa19.29■□□□□ 0.68
UBA3-201ENST00000349511 MAP3K4Q9Y6R4 1608 aa19.29■□□□□ 0.68
UBA3-201ENST00000349511 ATP7AQ04656 1500 aa19.27■□□□□ 0.68
UBA3-201ENST00000349511 DUOX2Q9NRD8 1548 aa19.27■□□□□ 0.68
UBA3-201ENST00000349511 YTHDC1Q96MU7 727 aaKnown RBP19.27■□□□□ 0.67
UBA3-201ENST00000349511 CFAP74Q9C0B2 1584 aa19.26■□□□□ 0.67
UBA3-201ENST00000349511 RTEL1-TNFRSF6BF6WH68 1400 aa19.26■□□□□ 0.67
UBA3-201ENST00000349511 GLI2P10070 1586 aa19.26■□□□□ 0.67
UBA3-201ENST00000349511 ZNF518AQ6AHZ1 1483 aa19.25■□□□□ 0.67
UBA3-201ENST00000349511 TONSLQ96HA7 1378 aa19.24■□□□□ 0.67
UBA3-201ENST00000349511 POGZQ7Z3K3 1410 aa19.24■□□□□ 0.67
UBA3-201ENST00000349511 INO80Q9ULG1 1556 aaPredicted RBP19.23■□□□□ 0.67
UBA3-201ENST00000349511 ANKRD30BQ9BXX2 1392 aa19.23■□□□□ 0.67
UBA3-201ENST00000349511 NEO1Q92859 1461 aa19.23■□□□□ 0.67
UBA3-201ENST00000349511 ERBINQ96RT1 1412 aa19.21■□□□□ 0.67
UBA3-201ENST00000349511 KIDINS220Q9ULH0 1771 aa19.21■□□□□ 0.67
UBA3-201ENST00000349511 KIF3BO15066 747 aa19.19■□□□□ 0.66
UBA3-201ENST00000349511 FAM135AQ9P2D6 1515 aa19.19■□□□□ 0.66
UBA3-201ENST00000349511 KIF13AQ9H1H9 1805 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms