RNA–Protein interactions for RNA: ENST00000349215.7

HPS5-201, Transcript of HPS5, biogenesis of lysosomal organelles complex 2 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS5, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5-201ENST00000349215 SYNJ2O15056 1496 aa10.99□□□□□ -0.65
HPS5-201ENST00000349215 SRPK2P78362 688 aaKnown RBP10.99□□□□□ -0.65
HPS5-201ENST00000349215 SNAPC4Q5SXM2 1469 aa10.97□□□□□ -0.65
HPS5-201ENST00000349215 AEBP2Q6ZN18 517 aaPredicted RBP10.97□□□□□ -0.65
HPS5-201ENST00000349215 MYOM3Q5VTT5 1437 aa10.96□□□□□ -0.66
HPS5-201ENST00000349215 PPM1GO15355 546 aaPredicted RBP10.96□□□□□ -0.66
HPS5-201ENST00000349215 HIRIP3Q9BW71 556 aaPredicted RBP10.96□□□□□ -0.66
HPS5-201ENST00000349215 PNNQ9H307 717 aaKnown RBP10.96□□□□□ -0.66
HPS5-201ENST00000349215 CUX1P39880 1505 aa10.95□□□□□ -0.66
HPS5-201ENST00000349215 STK26Q9P289 416 aa10.95□□□□□ -0.66
HPS5-201ENST00000349215 VGFO15240 615 aaPredicted RBP10.95□□□□□ -0.66
HPS5-201ENST00000349215 HDGFL2Q7Z4V5 671 aaPredicted RBP10.95□□□□□ -0.66
HPS5-201ENST00000349215 TOP2BQ02880 1626 aa10.95□□□□□ -0.66
HPS5-201ENST00000349215 KIAA0586Q9BVV6 1533 aa10.94□□□□□ -0.66
HPS5-201ENST00000349215 ERICH3Q5RHP9 1530 aa10.94□□□□□ -0.66
HPS5-201ENST00000349215 ABCA10Q8WWZ4 1543 aa10.94□□□□□ -0.66
HPS5-201ENST00000349215 RAB3GAP2Q9H2M9 1393 aa10.93□□□□□ -0.66
HPS5-201ENST00000349215 SALL2Q9Y467 1007 aaPredicted RBP10.93□□□□□ -0.66
HPS5-201ENST00000349215 CASKIN1Q8WXD9 1431 aa10.92□□□□□ -0.66
HPS5-201ENST00000349215 UACAQ9BZF9 1416 aa10.92□□□□□ -0.66
HPS5-201ENST00000349215 MAGI1Q96QZ7 1491 aaPredicted RBP10.92□□□□□ -0.66
HPS5-201ENST00000349215 STAC3Q96MF2 364 aa10.92□□□□□ -0.66
HPS5-201ENST00000349215 MAPK8IP3Q9UPT6 1336 aa10.91□□□□□ -0.66
HPS5-201ENST00000349215 BCL11AQ9H165 835 aa10.91□□□□□ -0.66
HPS5-201ENST00000349215 EIF3AQ14152 1382 aaKnown RBP10.91□□□□□ -0.66
HPS5-201ENST00000349215 SYNJ1O43426 1573 aa10.91□□□□□ -0.66
HPS5-201ENST00000349215 SAFB2Q14151 953 aaKnown RBP eCLIP10.9□□□□□ -0.66
HPS5-201ENST00000349215 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.9□□□□□ -0.66
HPS5-201ENST00000349215 PRXQ9BXM0 1461 aa10.9□□□□□ -0.66
HPS5-201ENST00000349215 ABCA5Q8WWZ7 1642 aa10.9□□□□□ -0.67
HPS5-201ENST00000349215 FOXD1Q16676 465 aa10.89□□□□□ -0.67
HPS5-201ENST00000349215 MYT1Q01538 1121 aa10.88□□□□□ -0.67
HPS5-201ENST00000349215 EFCAB5A4FU69 1503 aa10.88□□□□□ -0.67
HPS5-201ENST00000349215 TERF2IPQ9NYB0 399 aa10.88□□□□□ -0.67
HPS5-201ENST00000349215 CCDC144AA2RUR9 1427 aa10.87□□□□□ -0.67
HPS5-201ENST00000349215 PLEKHH2Q8IVE3 1493 aa10.87□□□□□ -0.67
HPS5-201ENST00000349215 MORC1Q86VD1 984 aa10.86□□□□□ -0.67
HPS5-201ENST00000349215 ROCK2O75116 1388 aaKnown RBP10.86□□□□□ -0.67
HPS5-201ENST00000349215 MYH16Q9H6N6 1097 aa10.85□□□□□ -0.67
HPS5-201ENST00000349215 KIF21BO75037 1637 aa10.85□□□□□ -0.67
HPS5-201ENST00000349215 AFAP1Q8N556 730 aa10.85□□□□□ -0.67
HPS5-201ENST00000349215 KIF15Q9NS87 1388 aa10.85□□□□□ -0.67
HPS5-201ENST00000349215 PAK3O75914 559 aaPredicted RBP10.84□□□□□ -0.67
HPS5-201ENST00000349215 NGDNQ8NEJ9 315 aaKnown RBP10.84□□□□□ -0.67
HPS5-201ENST00000349215 FYCO1Q9BQS8 1478 aa10.84□□□□□ -0.67
HPS5-201ENST00000349215 TROQ12816 1431 aaPredicted RBP10.84□□□□□ -0.67
HPS5-201ENST00000349215 L3MBTL2Q969R5 705 aa10.84□□□□□ -0.67
HPS5-201ENST00000349215 U2SURPO15042 1029 aaKnown RBP10.83□□□□□ -0.68
HPS5-201ENST00000349215 URB2Q14146 1524 aaKnown RBP10.83□□□□□ -0.68
HPS5-201ENST00000349215 FGD6Q6ZV73 1430 aa10.83□□□□□ -0.68
HPS5-201ENST00000349215 POGZQ7Z3K3 1410 aa10.82□□□□□ -0.68
HPS5-201ENST00000349215 GRIN2AQ12879 1464 aa10.82□□□□□ -0.68
HPS5-201ENST00000349215 TNNT2P45379 298 aaPredicted RBP10.82□□□□□ -0.68
HPS5-201ENST00000349215 ARHGAP5Q13017 1502 aa10.81□□□□□ -0.68
HPS5-201ENST00000349215 ZNF644Q9H582 1327 aaPredicted RBP10.81□□□□□ -0.68
HPS5-201ENST00000349215 ARXQ96QS3 562 aa10.81□□□□□ -0.68
HPS5-201ENST00000349215 CHMP4AQ9BY43 222 aa10.81□□□□□ -0.68
HPS5-201ENST00000349215 PBRM1Q86U86 1689 aa10.8□□□□□ -0.68
HPS5-201ENST00000349215 CSB-PGBD3P0DP91 1061 aa10.8□□□□□ -0.68
HPS5-201ENST00000349215 HSPA5P11021 654 aaKnown RBP10.8□□□□□ -0.68
HPS5-201ENST00000349215 LRRC9Q6ZRR7 1453 aa10.8□□□□□ -0.68
HPS5-201ENST00000349215 CC2D1BQ5T0F9 858 aaKnown RBP10.8□□□□□ -0.68
HPS5-201ENST00000349215 SOX12O15370 315 aa10.8□□□□□ -0.68
HPS5-201ENST00000349215 ANKRD50Q9ULJ7 1429 aa10.79□□□□□ -0.68
HPS5-201ENST00000349215 NUTM2DQ5VT03 806 aaPredicted RBP10.79□□□□□ -0.68
HPS5-201ENST00000349215 CHMP4BQ9H444 224 aaKnown RBP10.79□□□□□ -0.68
HPS5-201ENST00000349215 NCOA2Q15596 1464 aa10.79□□□□□ -0.68
HPS5-201ENST00000349215 UPF2Q9HAU5 1272 aaKnown RBP10.79□□□□□ -0.68
HPS5-201ENST00000349215 THEMISQ8N1K5 641 aaPredicted RBP10.78□□□□□ -0.68
HPS5-201ENST00000349215 TRAK1Q9UPV9 953 aa10.78□□□□□ -0.68
HPS5-201ENST00000349215 MIA2Q96PC5 1412 aa10.78□□□□□ -0.68
HPS5-201ENST00000349215 MS4A1P11836 297 aa10.77□□□□□ -0.69
HPS5-201ENST00000349215 RTF1Q92541 710 aaKnown RBP10.77□□□□□ -0.69
HPS5-201ENST00000349215 NEUROD2Q15784 382 aa10.77□□□□□ -0.69
HPS5-201ENST00000349215 IQGAP2Q13576 1575 aa10.77□□□□□ -0.69
HPS5-201ENST00000349215 SLC52A1Q9NWF4 448 aa10.76□□□□□ -0.69
HPS5-201ENST00000349215 MIER1Q8N108 512 aa10.76□□□□□ -0.69
HPS5-201ENST00000349215 SCAPERQ9BY12 1400 aa10.76□□□□□ -0.69
HPS5-201ENST00000349215 CUL7Q14999 1698 aa10.76□□□□□ -0.69
HPS5-201ENST00000349215 GTF3C3Q9Y5Q9 886 aa10.76□□□□□ -0.69
HPS5-201ENST00000349215 EVC2Q86UK5 1308 aa10.76□□□□□ -0.69
HPS5-201ENST00000349215 ZNF608Q9ULD9 1512 aaPredicted RBP10.76□□□□□ -0.69
HPS5-201ENST00000349215 NPHP1O15259 732 aa10.75□□□□□ -0.69
HPS5-201ENST00000349215 CALD1Q05682 793 aaKnown RBP10.75□□□□□ -0.69
HPS5-201ENST00000349215 SHROOM2Q13796 1616 aa10.75□□□□□ -0.69
HPS5-201ENST00000349215 KTN1Q86UP2 1357 aaKnown RBP10.75□□□□□ -0.69
HPS5-201ENST00000349215 ARAP1Q96P48 1450 aa10.75□□□□□ -0.69
HPS5-201ENST00000349215 CD109Q6YHK3 1445 aa10.75□□□□□ -0.69
HPS5-201ENST00000349215 RALBP1Q15311 655 aa10.75□□□□□ -0.69
HPS5-201ENST00000349215 LAS1LQ9Y4W2 734 aaKnown RBP10.75□□□□□ -0.69
HPS5-201ENST00000349215 RTL5Q5HYW3 569 aaPredicted RBP10.74□□□□□ -0.69
HPS5-201ENST00000349215 CCDC136Q96JN2 1154 aa10.74□□□□□ -0.69
HPS5-201ENST00000349215 RAPGEF3O95398 923 aa10.74□□□□□ -0.69
HPS5-201ENST00000349215 CCDC9Q9Y3X0 531 aaKnown RBP10.74□□□□□ -0.69
HPS5-201ENST00000349215 PHLDB1Q86UU1 1377 aa10.74□□□□□ -0.69
HPS5-201ENST00000349215 DHX57Q6P158 1386 aaKnown RBP10.73□□□□□ -0.69
HPS5-201ENST00000349215 HECW1Q76N89 1606 aa10.73□□□□□ -0.69
HPS5-201ENST00000349215 ATF3P18847 181 aa10.72□□□□□ -0.69
HPS5-201ENST00000349215 AMPHP49418 695 aa10.72□□□□□ -0.69
HPS5-201ENST00000349215 FKBP8Q14318 412 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms