RNA–Protein interactions for RNA: ENST00000348069.6

NLRP3-202, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-202ENST00000348069 NCOA2Q15596 1464 aa10.97□□□□□ -0.65
NLRP3-202ENST00000348069 KIAA0586Q9BVV6 1533 aa10.96□□□□□ -0.65
NLRP3-202ENST00000348069 FGD6Q6ZV73 1430 aa10.96□□□□□ -0.65
NLRP3-202ENST00000348069 MRS2Q9HD23 443 aa10.96□□□□□ -0.65
NLRP3-202ENST00000348069 SALL2Q9Y467 1007 aaPredicted RBP10.96□□□□□ -0.65
NLRP3-202ENST00000348069 GGT6Q6P531 493 aa10.96□□□□□ -0.65
NLRP3-202ENST00000348069 PCF11O94913 1555 aaKnown RBP10.96□□□□□ -0.66
NLRP3-202ENST00000348069 AFAP1Q8N556 730 aa10.96□□□□□ -0.66
NLRP3-202ENST00000348069 PPP4R2Q9NY27 417 aa10.96□□□□□ -0.66
NLRP3-202ENST00000348069 SYNJ2O15056 1496 aa10.95□□□□□ -0.66
NLRP3-202ENST00000348069 TRHP20396 242 aaPredicted RBP10.95□□□□□ -0.66
NLRP3-202ENST00000348069 CCDC136Q96JN2 1154 aa10.94□□□□□ -0.66
NLRP3-202ENST00000348069 ZBTB47Q9UFB7 747 aaPredicted RBP10.94□□□□□ -0.66
NLRP3-202ENST00000348069 CCDC18Q5T9S5 1454 aa10.93□□□□□ -0.66
NLRP3-202ENST00000348069 IQGAP2Q13576 1575 aa10.93□□□□□ -0.66
NLRP3-202ENST00000348069 TIAM1Q13009 1591 aa10.93□□□□□ -0.66
NLRP3-202ENST00000348069 EFCAB2Q5VUJ9 269 aa10.93□□□□□ -0.66
NLRP3-202ENST00000348069 NUP155O75694 1391 aa10.92□□□□□ -0.66
NLRP3-202ENST00000348069 MYOM3Q5VTT5 1437 aa10.92□□□□□ -0.66
NLRP3-202ENST00000348069 FYCO1Q9BQS8 1478 aa10.92□□□□□ -0.66
NLRP3-202ENST00000348069 NOP58Q9Y2X3 529 aaKnown RBP10.92□□□□□ -0.66
NLRP3-202ENST00000348069 PPP1R15AO75807 674 aaPredicted RBP10.91□□□□□ -0.66
NLRP3-202ENST00000348069 DCAF11Q8TEB1 546 aa10.91□□□□□ -0.66
NLRP3-202ENST00000348069 L3MBTL2Q969R5 705 aa10.9□□□□□ -0.66
NLRP3-202ENST00000348069 EPRSP07814 1512 aaKnown RBP10.9□□□□□ -0.66
NLRP3-202ENST00000348069 KIF3BO15066 747 aa10.9□□□□□ -0.66
NLRP3-202ENST00000348069 TIMELESSQ9UNS1 1208 aa10.9□□□□□ -0.66
NLRP3-202ENST00000348069 EIF4G3O43432 1585 aaKnown RBP10.89□□□□□ -0.67
NLRP3-202ENST00000348069 PLEKHG5O94827 1062 aa10.89□□□□□ -0.67
NLRP3-202ENST00000348069 FANCIQ9NVI1 1328 aa10.89□□□□□ -0.67
NLRP3-202ENST00000348069 MAGI1Q96QZ7 1491 aaPredicted RBP10.89□□□□□ -0.67
NLRP3-202ENST00000348069 MAPKBP1O60336 1514 aa10.89□□□□□ -0.67
NLRP3-202ENST00000348069 CUL7Q14999 1698 aa10.89□□□□□ -0.67
NLRP3-202ENST00000348069 MSH5O43196 834 aa10.88□□□□□ -0.67
NLRP3-202ENST00000348069 EIF4G2P78344 907 aaKnown RBP eCLIP10.88□□□□□ -0.67
NLRP3-202ENST00000348069 NUTM2DQ5VT03 806 aaPredicted RBP10.88□□□□□ -0.67
NLRP3-202ENST00000348069 WDR62O43379 1518 aa10.88□□□□□ -0.67
NLRP3-202ENST00000348069 TARBP1Q13395 1621 aaKnown RBP10.87□□□□□ -0.67
NLRP3-202ENST00000348069 ARID4BQ4LE39 1312 aaPredicted RBP10.87□□□□□ -0.67
NLRP3-202ENST00000348069 EFCAB5A4FU69 1503 aa10.87□□□□□ -0.67
NLRP3-202ENST00000348069 RTN4Q9NQC3 1192 aaKnown RBP10.87□□□□□ -0.67
NLRP3-202ENST00000348069 STAG3Q9UJ98 1225 aa10.87□□□□□ -0.67
NLRP3-202ENST00000348069 CFAP43Q8NDM7 1665 aa10.86□□□□□ -0.67
NLRP3-202ENST00000348069 SPAG9O60271 1321 aaKnown RBP10.86□□□□□ -0.67
NLRP3-202ENST00000348069 ESF1Q9H501 851 aaKnown RBP10.85□□□□□ -0.67
NLRP3-202ENST00000348069 PTPRKQ15262 1439 aa10.85□□□□□ -0.67
NLRP3-202ENST00000348069 FAM69CQ0P6D2 419 aa10.85□□□□□ -0.67
NLRP3-202ENST00000348069 ABCA5Q8WWZ7 1642 aa10.84□□□□□ -0.67
NLRP3-202ENST00000348069 ARHGEF11O15085 1522 aa10.84□□□□□ -0.67
NLRP3-202ENST00000348069 RAPGEF3O95398 923 aa10.84□□□□□ -0.67
NLRP3-202ENST00000348069 ANKRD30AQ9BXX3 1397 aa10.84□□□□□ -0.67
NLRP3-202ENST00000348069 ADAMTS12P58397 1594 aa10.83□□□□□ -0.68
NLRP3-202ENST00000348069 THOC2Q8NI27 1593 aaKnown RBP10.83□□□□□ -0.68
NLRP3-202ENST00000348069 CARD11Q9BXL7 1154 aa10.83□□□□□ -0.68
NLRP3-202ENST00000348069 TROQ12816 1431 aaPredicted RBP10.82□□□□□ -0.68
NLRP3-202ENST00000348069 HSPA5P11021 654 aaKnown RBP10.81□□□□□ -0.68
NLRP3-202ENST00000348069 ERICH6BQ5W0A0 696 aa10.81□□□□□ -0.68
NLRP3-202ENST00000348069 UACAQ9BZF9 1416 aa10.81□□□□□ -0.68
NLRP3-202ENST00000348069 NUP153P49790 1475 aaKnown RBP10.81□□□□□ -0.68
NLRP3-202ENST00000348069 DISP1Q96F81 1524 aa10.81□□□□□ -0.68
NLRP3-202ENST00000348069 PKNOX2Q96KN3 472 aa10.8□□□□□ -0.68
NLRP3-202ENST00000348069 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.8□□□□□ -0.68
NLRP3-202ENST00000348069 LAS1LQ9Y4W2 734 aaKnown RBP10.8□□□□□ -0.68
NLRP3-202ENST00000348069 SAFB2Q14151 953 aaKnown RBP eCLIP10.79□□□□□ -0.68
NLRP3-202ENST00000348069 TMC1Q8TDI8 760 aa10.79□□□□□ -0.68
NLRP3-202ENST00000348069 KIF15Q9NS87 1388 aa10.79□□□□□ -0.68
NLRP3-202ENST00000348069 ATP10BO94823 1461 aa10.78□□□□□ -0.68
NLRP3-202ENST00000348069 WDR97A6NE52 1622 aa10.77□□□□□ -0.69
NLRP3-202ENST00000348069 NAIPQ13075 1403 aa10.76□□□□□ -0.69
NLRP3-202ENST00000348069 NEFMP07197 916 aa10.76□□□□□ -0.69
NLRP3-202ENST00000348069 CEP170Q5SW79 1584 aa10.76□□□□□ -0.69
NLRP3-202ENST00000348069 ANKRD50Q9ULJ7 1429 aa10.75□□□□□ -0.69
NLRP3-202ENST00000348069 PBRM1Q86U86 1689 aa10.75□□□□□ -0.69
NLRP3-202ENST00000348069 HECW1Q76N89 1606 aa10.75□□□□□ -0.69
NLRP3-202ENST00000348069 ARHGAP5Q13017 1502 aa10.75□□□□□ -0.69
NLRP3-202ENST00000348069 NUP160Q12769 1436 aa10.74□□□□□ -0.69
NLRP3-202ENST00000348069 MAGI3Q5TCQ9 1506 aa10.74□□□□□ -0.69
NLRP3-202ENST00000348069 EHBP1L1Q8N3D4 1523 aa10.74□□□□□ -0.69
NLRP3-202ENST00000348069 SCAPERQ9BY12 1400 aa10.74□□□□□ -0.69
NLRP3-202ENST00000348069 IPO9Q96P70 1041 aaKnown RBP10.74□□□□□ -0.69
NLRP3-202ENST00000348069 WASHC2CQ9Y4E1 1318 aa10.74□□□□□ -0.69
NLRP3-202ENST00000348069 ABCC5O15440 1437 aa10.73□□□□□ -0.69
NLRP3-202ENST00000348069 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.73□□□□□ -0.69
NLRP3-202ENST00000348069 CTTNBP2Q8WZ74 1663 aa10.73□□□□□ -0.69
NLRP3-202ENST00000348069 PODXL2Q9NZ53 605 aa10.73□□□□□ -0.69
NLRP3-202ENST00000348069 DAPK1P53355 1430 aa10.73□□□□□ -0.69
NLRP3-202ENST00000348069 NBPF8Q3BBV2 869 aa10.72□□□□□ -0.69
NLRP3-202ENST00000348069 STK26Q9P289 416 aa10.72□□□□□ -0.69
NLRP3-202ENST00000348069 PAK3O75914 559 aaPredicted RBP10.72□□□□□ -0.69
NLRP3-202ENST00000348069 UGGT2Q9NYU1 1516 aa10.71□□□□□ -0.69
NLRP3-202ENST00000348069 KIAA0556O60303 1618 aa10.71□□□□□ -0.69
NLRP3-202ENST00000348069 HFM1A2PYH4 1435 aa10.71□□□□□ -0.69
NLRP3-202ENST00000348069 C9orf84Q5VXU9 1444 aa10.7□□□□□ -0.7
NLRP3-202ENST00000348069 RSPH4AQ5TD94 716 aa10.7□□□□□ -0.7
NLRP3-202ENST00000348069 ERCC6L2Q5T890 1561 aa10.7□□□□□ -0.7
NLRP3-202ENST00000348069 GPATCH8Q9UKJ3 1502 aaKnown RBP10.7□□□□□ -0.7
NLRP3-202ENST00000348069 PRKRIP1Q9H875 184 aaPredicted RBP10.7□□□□□ -0.7
NLRP3-202ENST00000348069 ST20-MTHFSA0A0A6YYL1 179 aa10.69□□□□□ -0.7
NLRP3-202ENST00000348069 TNNT2P45379 298 aaPredicted RBP10.69□□□□□ -0.7
NLRP3-202ENST00000348069 MIA2Q96PC5 1412 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms