RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 CADPSQ9ULU8 1353 aa14.18□□□□□ -0.14
CLCN6-202ENST00000346436 PHLDB1Q86UU1 1377 aa14.17□□□□□ -0.14
CLCN6-202ENST00000346436 LAS1LQ9Y4W2 734 aaKnown RBP14.17□□□□□ -0.14
CLCN6-202ENST00000346436 IGF1RP08069 1367 aa14.16□□□□□ -0.14
CLCN6-202ENST00000346436 PKD2Q13563 968 aa14.16□□□□□ -0.14
CLCN6-202ENST00000346436 PHF23Q9BUL5 403 aaPredicted RBP14.16□□□□□ -0.14
CLCN6-202ENST00000346436 FMN1Q68DA7 1419 aa14.16□□□□□ -0.14
CLCN6-202ENST00000346436 SRPK2P78362 688 aaKnown RBP14.14□□□□□ -0.15
CLCN6-202ENST00000346436 PAK3O75914 559 aaPredicted RBP14.14□□□□□ -0.15
CLCN6-202ENST00000346436 NOP58Q9Y2X3 529 aaKnown RBP14.14□□□□□ -0.15
CLCN6-202ENST00000346436 EIF5BO60841 1220 aaKnown RBP14.12□□□□□ -0.15
CLCN6-202ENST00000346436 HDGFL2Q7Z4V5 671 aaPredicted RBP14.12□□□□□ -0.15
CLCN6-202ENST00000346436 CHMP4AQ9BY43 222 aa14.12□□□□□ -0.15
CLCN6-202ENST00000346436 RSPH4AQ5TD94 716 aa14.11□□□□□ -0.15
CLCN6-202ENST00000346436 RAD54L2Q9Y4B4 1467 aa14.09□□□□□ -0.15
CLCN6-202ENST00000346436 NEUROD2Q15784 382 aa14.09□□□□□ -0.15
CLCN6-202ENST00000346436 FGD5Q6ZNL6 1462 aa14.09□□□□□ -0.15
CLCN6-202ENST00000346436 CCDC18Q5T9S5 1454 aa14.09□□□□□ -0.15
CLCN6-202ENST00000346436 CHMP4BQ9H444 224 aaKnown RBP14.09□□□□□ -0.15
CLCN6-202ENST00000346436 RTN4Q9NQC3 1192 aaKnown RBP14.08□□□□□ -0.16
CLCN6-202ENST00000346436 WASHC2CQ9Y4E1 1318 aa14.08□□□□□ -0.16
CLCN6-202ENST00000346436 ANP32BQ92688 251 aaKnown RBP14.08□□□□□ -0.16
CLCN6-202ENST00000346436 RGS3P49796 1198 aa14.07□□□□□ -0.16
CLCN6-202ENST00000346436 JPH4Q96JJ6 628 aa14.07□□□□□ -0.16
CLCN6-202ENST00000346436 SPAG9O60271 1321 aaKnown RBP14.07□□□□□ -0.16
CLCN6-202ENST00000346436 FAM69CQ0P6D2 419 aa14.07□□□□□ -0.16
CLCN6-202ENST00000346436 TNNT2P45379 298 aaPredicted RBP14.06□□□□□ -0.16
CLCN6-202ENST00000346436 LRRC9Q6ZRR7 1453 aa14.06□□□□□ -0.16
CLCN6-202ENST00000346436 FANCD2Q9BXW9 1451 aa14.05□□□□□ -0.16
CLCN6-202ENST00000346436 RRBP1Q9P2E9 1410 aaKnown RBP14.05□□□□□ -0.16
CLCN6-202ENST00000346436 RTF1Q92541 710 aaKnown RBP14.05□□□□□ -0.16
CLCN6-202ENST00000346436 G3V3G9 751 aa14.04□□□□□ -0.16
CLCN6-202ENST00000346436 KIF3BO15066 747 aa14.04□□□□□ -0.16
CLCN6-202ENST00000346436 SOX12O15370 315 aa14.04□□□□□ -0.16
CLCN6-202ENST00000346436 DCAF8Q5TAQ9 597 aa14.04□□□□□ -0.16
CLCN6-202ENST00000346436 DEKP35659 375 aaKnown RBP14.04□□□□□ -0.16
CLCN6-202ENST00000346436 PRKRIP1Q9H875 184 aaPredicted RBP14.02□□□□□ -0.16
CLCN6-202ENST00000346436 NUP155O75694 1391 aa14.02□□□□□ -0.16
CLCN6-202ENST00000346436 STK26Q9P289 416 aa14.02□□□□□ -0.16
CLCN6-202ENST00000346436 TMF1P82094 1093 aa14.02□□□□□ -0.17
CLCN6-202ENST00000346436 NGDNQ8NEJ9 315 aaKnown RBP14.02□□□□□ -0.17
CLCN6-202ENST00000346436 PRXQ9BXM0 1461 aa14.01□□□□□ -0.17
CLCN6-202ENST00000346436 OS9Q13438 667 aaPredicted RBP14.01□□□□□ -0.17
CLCN6-202ENST00000346436 CASC1Q6TDU7 716 aa14□□□□□ -0.17
CLCN6-202ENST00000346436 PTPRGP23470 1445 aa14□□□□□ -0.17
CLCN6-202ENST00000346436 FGD6Q6ZV73 1430 aa14□□□□□ -0.17
CLCN6-202ENST00000346436 HNRNPMP52272 730 aaKnown RBP eCLIP13.99□□□□□ -0.17
CLCN6-202ENST00000346436 ERICH3Q5RHP9 1530 aa13.99□□□□□ -0.17
CLCN6-202ENST00000346436 ZNF644Q9H582 1327 aaPredicted RBP13.99□□□□□ -0.17
CLCN6-202ENST00000346436 U2SURPO15042 1029 aaKnown RBP13.99□□□□□ -0.17
CLCN6-202ENST00000346436 CUX1P39880 1505 aa13.99□□□□□ -0.17
CLCN6-202ENST00000346436 EVA1CP58658 441 aa13.99□□□□□ -0.17
CLCN6-202ENST00000346436 FRAT1Q92837 279 aaPredicted RBP13.99□□□□□ -0.17
CLCN6-202ENST00000346436 TOP2BQ02880 1626 aa13.99□□□□□ -0.17
CLCN6-202ENST00000346436 SF3B2Q13435 895 aaKnown RBP13.99□□□□□ -0.17
CLCN6-202ENST00000346436 ROCK2O75116 1388 aaKnown RBP13.98□□□□□ -0.17
CLCN6-202ENST00000346436 SAFB2Q14151 953 aaKnown RBP eCLIP13.97□□□□□ -0.17
CLCN6-202ENST00000346436 DDRGK1Q96HY6 314 aa13.97□□□□□ -0.17
CLCN6-202ENST00000346436 RCAN3Q9UKA8 241 aa13.97□□□□□ -0.17
CLCN6-202ENST00000346436 ANKRD30AQ9BXX3 1397 aa13.97□□□□□ -0.17
CLCN6-202ENST00000346436 MS4A1P11836 297 aa13.96□□□□□ -0.17
CLCN6-202ENST00000346436 WASHC2AQ641Q2 1341 aa13.96□□□□□ -0.17
CLCN6-202ENST00000346436 WDR97A6NE52 1622 aa13.96□□□□□ -0.17
CLCN6-202ENST00000346436 MSH5O43196 834 aa13.96□□□□□ -0.18
CLCN6-202ENST00000346436 ST20-MTHFSA0A0A6YYL1 179 aa13.95□□□□□ -0.18
CLCN6-202ENST00000346436 FTSJ3Q8IY81 847 aaKnown RBP13.95□□□□□ -0.18
CLCN6-202ENST00000346436 ISY1Q9ULR0 285 aaKnown RBP13.95□□□□□ -0.18
CLCN6-202ENST00000346436 ZNF330Q9Y3S2 320 aaPredicted RBP13.95□□□□□ -0.18
CLCN6-202ENST00000346436 GTF2E1P29083 439 aaPredicted RBP13.94□□□□□ -0.18
CLCN6-202ENST00000346436 KTN1Q86UP2 1357 aaKnown RBP13.93□□□□□ -0.18
CLCN6-202ENST00000346436 NCAPD3P42695 1498 aa13.93□□□□□ -0.18
CLCN6-202ENST00000346436 ERICH6BQ5W0A0 696 aa13.93□□□□□ -0.18
CLCN6-202ENST00000346436 EIF3AQ14152 1382 aaKnown RBP13.92□□□□□ -0.18
CLCN6-202ENST00000346436 ATF3P18847 181 aa13.92□□□□□ -0.18
CLCN6-202ENST00000346436 UACAQ9BZF9 1416 aa13.92□□□□□ -0.18
CLCN6-202ENST00000346436 CCDC184Q52MB2 194 aa13.92□□□□□ -0.18
CLCN6-202ENST00000346436 PLIN1O60240 522 aa13.91□□□□□ -0.18
CLCN6-202ENST00000346436 MORC1Q86VD1 984 aa13.91□□□□□ -0.18
CLCN6-202ENST00000346436 TERF2IPQ9NYB0 399 aa13.91□□□□□ -0.18
CLCN6-202ENST00000346436 HDAC5Q9UQL6 1122 aa13.91□□□□□ -0.18
CLCN6-202ENST00000346436 MYOM3Q5VTT5 1437 aa13.91□□□□□ -0.18
CLCN6-202ENST00000346436 CALD1Q05682 793 aaKnown RBP13.91□□□□□ -0.18
CLCN6-202ENST00000346436 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.91□□□□□ -0.18
CLCN6-202ENST00000346436 ZRSR1Q15695 479 aaKnown RBP13.9□□□□□ -0.18
CLCN6-202ENST00000346436 KIF7Q2M1P5 1343 aa13.9□□□□□ -0.18
CLCN6-202ENST00000346436 CFTRP13569 1480 aa13.9□□□□□ -0.18
CLCN6-202ENST00000346436 NCOA2Q15596 1464 aa13.9□□□□□ -0.18
CLCN6-202ENST00000346436 ZBED9Q6R2W3 1325 aa13.89□□□□□ -0.19
CLCN6-202ENST00000346436 TULP1O00294 542 aaPredicted RBP13.89□□□□□ -0.19
CLCN6-202ENST00000346436 USP47Q96K76 1375 aa13.89□□□□□ -0.19
CLCN6-202ENST00000346436 RALBP1Q15311 655 aa13.88□□□□□ -0.19
CLCN6-202ENST00000346436 TIAM1Q13009 1591 aa13.88□□□□□ -0.19
CLCN6-202ENST00000346436 NCLP19338 710 aaKnown RBP13.88□□□□□ -0.19
CLCN6-202ENST00000346436 CASKIN1Q8WXD9 1431 aa13.88□□□□□ -0.19
CLCN6-202ENST00000346436 CCDC7Q96M83 1385 aa13.88□□□□□ -0.19
CLCN6-202ENST00000346436 CCDC146Q8IYE0 955 aa13.88□□□□□ -0.19
CLCN6-202ENST00000346436 EXOC6Q8TAG9 804 aa13.88□□□□□ -0.19
CLCN6-202ENST00000346436 GAPVD1Q14C86 1478 aa13.87□□□□□ -0.19
CLCN6-202ENST00000346436 FGD1P98174 961 aa13.87□□□□□ -0.19
CLCN6-202ENST00000346436 HMGB2P26583 209 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms