RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 CLASP1Q7Z460 1538 aa20.5■□□□□ 0.87
CDK5RAP1-202ENST00000346416 CAMSAP2Q08AD1 1489 aa20.5■□□□□ 0.87
CDK5RAP1-202ENST00000346416 ROCK1Q13464 1354 aa20.49■□□□□ 0.87
CDK5RAP1-202ENST00000346416 ABCC10Q5T3U5 1492 aa20.48■□□□□ 0.87
CDK5RAP1-202ENST00000346416 KDM6BO15054 1643 aa20.47■□□□□ 0.87
CDK5RAP1-202ENST00000346416 ZNF777Q9ULD5 760 aaPredicted RBP20.46■□□□□ 0.87
CDK5RAP1-202ENST00000346416 TIMELESSQ9UNS1 1208 aa20.46■□□□□ 0.87
CDK5RAP1-202ENST00000346416 CDC42BPAQ5VT25 1732 aa20.45■□□□□ 0.86
CDK5RAP1-202ENST00000346416 TRIM52Q96A61 297 aa20.42■□□□□ 0.86
CDK5RAP1-202ENST00000346416 ABCC2Q92887 1545 aa20.42■□□□□ 0.86
CDK5RAP1-202ENST00000346416 DENND4BO75064 1496 aaPredicted RBP20.37■□□□□ 0.85
CDK5RAP1-202ENST00000346416 CROCC2H7BZ55 1655 aa20.37■□□□□ 0.85
CDK5RAP1-202ENST00000346416 NCOA1Q15788 1441 aa20.36■□□□□ 0.85
CDK5RAP1-202ENST00000346416 ACIN1Q9UKV3 1341 aaKnown RBP20.35■□□□□ 0.85
CDK5RAP1-202ENST00000346416 ADGBQ8N7X0 1667 aa20.35■□□□□ 0.85
CDK5RAP1-202ENST00000346416 TONSLQ96HA7 1378 aa20.35■□□□□ 0.85
CDK5RAP1-202ENST00000346416 PPP1R15AO75807 674 aaPredicted RBP20.35■□□□□ 0.85
CDK5RAP1-202ENST00000346416 MPHOSPH9Q99550 1183 aa20.35■□□□□ 0.85
CDK5RAP1-202ENST00000346416 ADGRL2O95490 1459 aa20.34■□□□□ 0.85
CDK5RAP1-202ENST00000346416 UHRF1BP1LA0JNW5 1464 aa20.31■□□□□ 0.84
CDK5RAP1-202ENST00000346416 PREX2Q70Z35 1606 aa20.3■□□□□ 0.84
CDK5RAP1-202ENST00000346416 CDC42BPBQ9Y5S2 1711 aa20.3■□□□□ 0.84
CDK5RAP1-202ENST00000346416 ANKRD30AQ9BXX3 1397 aa20.3■□□□□ 0.84
CDK5RAP1-202ENST00000346416 MIER1Q8N108 512 aa20.29■□□□□ 0.84
CDK5RAP1-202ENST00000346416 SHANK2Q9UPX8 1470 aa20.28■□□□□ 0.84
CDK5RAP1-202ENST00000346416 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.28■□□□□ 0.84
CDK5RAP1-202ENST00000346416 TTC37Q6PGP7 1564 aa20.28■□□□□ 0.84
CDK5RAP1-202ENST00000346416 ZCCHC11Q5TAX3 1644 aaKnown RBP20.28■□□□□ 0.84
CDK5RAP1-202ENST00000346416 C9orf84Q5VXU9 1444 aa20.27■□□□□ 0.84
CDK5RAP1-202ENST00000346416 HNRNPMP52272 730 aaKnown RBP eCLIP20.27■□□□□ 0.84
CDK5RAP1-202ENST00000346416 KDM5BQ9UGL1 1544 aa20.27■□□□□ 0.83
CDK5RAP1-202ENST00000346416 SAMD9LQ8IVG5 1584 aa20.26■□□□□ 0.83
CDK5RAP1-202ENST00000346416 MBD5Q9P267 1494 aa20.26■□□□□ 0.83
CDK5RAP1-202ENST00000346416 TSPY4P0CV99 314 aa20.26■□□□□ 0.83
CDK5RAP1-202ENST00000346416 TSPY10P0CW01 314 aa20.26■□□□□ 0.83
CDK5RAP1-202ENST00000346416 ARHGEF5Q12774 1597 aa20.25■□□□□ 0.83
CDK5RAP1-202ENST00000346416 FOXD1Q16676 465 aa20.25■□□□□ 0.83
CDK5RAP1-202ENST00000346416 KCNH8Q96L42 1107 aa20.24■□□□□ 0.83
CDK5RAP1-202ENST00000346416 SLC4A1APQ9BWU0 796 aaKnown RBP20.23■□□□□ 0.83
CDK5RAP1-202ENST00000346416 ANKRD50Q9ULJ7 1429 aa20.23■□□□□ 0.83
CDK5RAP1-202ENST00000346416 ARHGAP5Q13017 1502 aa20.23■□□□□ 0.83
CDK5RAP1-202ENST00000346416 MYO5CQ9NQX4 1742 aa20.21■□□□□ 0.83
CDK5RAP1-202ENST00000346416 CCDC141Q6ZP82 1450 aa20.21■□□□□ 0.83
CDK5RAP1-202ENST00000346416 ANKRD30BQ9BXX2 1392 aa20.2■□□□□ 0.82
CDK5RAP1-202ENST00000346416 PZPP20742 1482 aa20.2■□□□□ 0.82
CDK5RAP1-202ENST00000346416 RSPH4AQ5TD94 716 aa20.2■□□□□ 0.82
CDK5RAP1-202ENST00000346416 SYCP2Q9BX26 1530 aa20.18■□□□□ 0.82
CDK5RAP1-202ENST00000346416 OSCARQ8IYS5 282 aa20.17■□□□□ 0.82
CDK5RAP1-202ENST00000346416 KIF15Q9NS87 1388 aa20.16■□□□□ 0.82
CDK5RAP1-202ENST00000346416 PLCH2O75038 1416 aa20.14■□□□□ 0.82
CDK5RAP1-202ENST00000346416 RPRD2Q5VT52 1461 aaKnown RBP20.14■□□□□ 0.81
CDK5RAP1-202ENST00000346416 KIAA1107Q9UPP5 1409 aa20.13■□□□□ 0.81
CDK5RAP1-202ENST00000346416 PLEKHH2Q8IVE3 1493 aa20.13■□□□□ 0.81
CDK5RAP1-202ENST00000346416 L3MBTL2Q969R5 705 aa20.11■□□□□ 0.81
CDK5RAP1-202ENST00000346416 HIRIP3Q9BW71 556 aaPredicted RBP20.11■□□□□ 0.81
CDK5RAP1-202ENST00000346416 NUP155O75694 1391 aa20.1■□□□□ 0.81
CDK5RAP1-202ENST00000346416 PKD2Q13563 968 aa20.09■□□□□ 0.81
CDK5RAP1-202ENST00000346416 EFCAB2Q5VUJ9 269 aa20.09■□□□□ 0.81
CDK5RAP1-202ENST00000346416 MAST1Q9Y2H9 1570 aa20.09■□□□□ 0.81
CDK5RAP1-202ENST00000346416 WDR7Q9Y4E6 1490 aa20.08■□□□□ 0.81
CDK5RAP1-202ENST00000346416 ARHGEF12Q9NZN5 1544 aa20.08■□□□□ 0.8
CDK5RAP1-202ENST00000346416 KDM5DQ9BY66 1539 aa20.07■□□□□ 0.8
CDK5RAP1-202ENST00000346416 CENPBP07199 599 aaPredicted RBP20.06■□□□□ 0.8
CDK5RAP1-202ENST00000346416 TEX14Q8IWB6 1497 aa20.06■□□□□ 0.8
CDK5RAP1-202ENST00000346416 ABCC1P33527 1531 aa20.04■□□□□ 0.8
CDK5RAP1-202ENST00000346416 YTHDC1Q96MU7 727 aaKnown RBP20.03■□□□□ 0.8
CDK5RAP1-202ENST00000346416 DDX10Q13206 875 aaKnown RBP20.03■□□□□ 0.8
CDK5RAP1-202ENST00000346416 PLXNC1O60486 1568 aa20.03■□□□□ 0.8
CDK5RAP1-202ENST00000346416 ARAP3Q8WWN8 1544 aa20.03■□□□□ 0.8
CDK5RAP1-202ENST00000346416 ASXL2Q76L83 1435 aa20■□□□□ 0.79
CDK5RAP1-202ENST00000346416 TRAPPC8Q9Y2L5 1435 aa19.99■□□□□ 0.79
CDK5RAP1-202ENST00000346416 ABCA9Q8IUA7 1624 aa19.98■□□□□ 0.79
CDK5RAP1-202ENST00000346416 FAM135AQ9P2D6 1515 aa19.97■□□□□ 0.79
CDK5RAP1-202ENST00000346416 NBPF8Q3BBV2 869 aa19.97■□□□□ 0.79
CDK5RAP1-202ENST00000346416 DUOX2Q9NRD8 1548 aa19.96■□□□□ 0.79
CDK5RAP1-202ENST00000346416 NPM1P06748 294 aaKnown RBP eCLIP19.95■□□□□ 0.78
CDK5RAP1-202ENST00000346416 UNC13BO14795 1591 aa19.95■□□□□ 0.78
CDK5RAP1-202ENST00000346416 HSPA5P11021 654 aaKnown RBP19.94■□□□□ 0.78
CDK5RAP1-202ENST00000346416 FANCAO15360 1455 aa19.94■□□□□ 0.78
CDK5RAP1-202ENST00000346416 EIF4G2P78344 907 aaKnown RBP eCLIP19.94■□□□□ 0.78
CDK5RAP1-202ENST00000346416 AFAP1Q8N556 730 aa19.93■□□□□ 0.78
CDK5RAP1-202ENST00000346416 ERBINQ96RT1 1412 aa19.92■□□□□ 0.78
CDK5RAP1-202ENST00000346416 SPAG9O60271 1321 aaKnown RBP19.92■□□□□ 0.78
CDK5RAP1-202ENST00000346416 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.91■□□□□ 0.789e-7■■■□□ 18.2
CDK5RAP1-202ENST00000346416 SCAF1Q9H7N4 1312 aaKnown RBP19.9■□□□□ 0.78
CDK5RAP1-202ENST00000346416 RTEL1-TNFRSF6BF6WH68 1400 aa19.9■□□□□ 0.78
CDK5RAP1-202ENST00000346416 IQGAP3Q86VI3 1631 aa19.88■□□□□ 0.77
CDK5RAP1-202ENST00000346416 ZFYVE16Q7Z3T8 1539 aa19.88■□□□□ 0.77
CDK5RAP1-202ENST00000346416 ADGRL1O94910 1474 aa19.86■□□□□ 0.77
CDK5RAP1-202ENST00000346416 MAGI2Q86UL8 1455 aa19.86■□□□□ 0.77
CDK5RAP1-202ENST00000346416 SCAPERQ9BY12 1400 aa19.85■□□□□ 0.77
CDK5RAP1-202ENST00000346416 WASHC2AQ641Q2 1341 aa19.84■□□□□ 0.77
CDK5RAP1-202ENST00000346416 ZNF326Q5BKZ1 582 aaKnown RBP19.83■□□□□ 0.77
CDK5RAP1-202ENST00000346416 ATP7AQ04656 1500 aa19.82■□□□□ 0.76
CDK5RAP1-202ENST00000346416 INO80Q9ULG1 1556 aaPredicted RBP19.82■□□□□ 0.76
CDK5RAP1-202ENST00000346416 CCDC144AA2RUR9 1427 aa19.81■□□□□ 0.76
CDK5RAP1-202ENST00000346416 SPATA31E1Q6ZUB1 1445 aa19.81■□□□□ 0.76
CDK5RAP1-202ENST00000346416 PLA2R1Q13018 1463 aa19.81■□□□□ 0.76
CDK5RAP1-202ENST00000346416 UHRF1BP1Q6BDS2 1440 aa19.8■□□□□ 0.76
CDK5RAP1-202ENST00000346416 ANP32CO43423 234 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms