RNA–Protein interactions for RNA: ENST00000346279.3

XAGE3-201, Transcript of X antigen family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XAGE3, Length 497 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XAGE3-201ENST00000346279 VASPP50552 380 aaPredicted RBP12.58□□□□□ -0.4
XAGE3-201ENST00000346279 MYT1LQ9UL68 1186 aa12.56□□□□□ -0.4
XAGE3-201ENST00000346279 ERBB3P21860 1342 aa12.56□□□□□ -0.4
XAGE3-201ENST00000346279 NESP48681 1621 aa12.55□□□□□ -0.4
XAGE3-201ENST00000346279 RSF1Q96T23 1441 aaPredicted RBP12.55□□□□□ -0.4
XAGE3-201ENST00000346279 ILDR1Q86SU0 546 aaPredicted RBP12.55□□□□□ -0.4
XAGE3-201ENST00000346279 ZNF710Q8N1W2 664 aa12.53□□□□□ -0.4
XAGE3-201ENST00000346279 G3V3G9 751 aa12.51□□□□□ -0.41
XAGE3-201ENST00000346279 DPY19L2Q6NUT2 758 aa12.51□□□□□ -0.41
XAGE3-201ENST00000346279 PDAP1Q13442 181 aaKnown RBP12.5□□□□□ -0.41
XAGE3-201ENST00000346279 DOK7Q18PE1 504 aa12.48□□□□□ -0.41
XAGE3-201ENST00000346279 VARS2Q5ST30 1063 aaKnown RBP12.46□□□□□ -0.41
XAGE3-201ENST00000346279 BOLA1Q9Y3E2 137 aa12.46□□□□□ -0.41
XAGE3-201ENST00000346279 CABP2Q9NPB3 220 aa12.44□□□□□ -0.42
XAGE3-201ENST00000346279 CIZ1Q9ULV3 898 aaPredicted RBP12.42□□□□□ -0.42
XAGE3-201ENST00000346279 ERCC6Q03468 1493 aa12.41□□□□□ -0.42
XAGE3-201ENST00000346279 LAMC3Q9Y6N6 1575 aa12.41□□□□□ -0.42
XAGE3-201ENST00000346279 CADPSQ9ULU8 1353 aa12.41□□□□□ -0.42
XAGE3-201ENST00000346279 ZNF687Q8N1G0 1237 aa12.4□□□□□ -0.42
XAGE3-201ENST00000346279 SPOCK2Q92563 424 aa12.4□□□□□ -0.42
XAGE3-201ENST00000346279 PTGER2P43116 358 aa12.39□□□□□ -0.43
XAGE3-201ENST00000346279 TOP2AP11388 1531 aaKnown RBP12.38□□□□□ -0.43
XAGE3-201ENST00000346279 RIMBP2O15034 1052 aa12.38□□□□□ -0.43
XAGE3-201ENST00000346279 KIF21AQ7Z4S6 1674 aa12.35□□□□□ -0.43
XAGE3-201ENST00000346279 CUX2O14529 1486 aa12.34□□□□□ -0.43
XAGE3-201ENST00000346279 PDS5BQ9NTI5 1447 aa12.33□□□□□ -0.44
XAGE3-201ENST00000346279 THOC2Q8NI27 1593 aaKnown RBP12.33□□□□□ -0.44
XAGE3-201ENST00000346279 ZSWIM6Q9HCJ5 1215 aa12.31□□□□□ -0.44
XAGE3-201ENST00000346279 CCDC88BA6NC98 1476 aa12.31□□□□□ -0.44
XAGE3-201ENST00000346279 CFTRP13569 1480 aa12.31□□□□□ -0.44
XAGE3-201ENST00000346279 IFNLR1Q8IU57 520 aaPredicted RBP12.29□□□□□ -0.44
XAGE3-201ENST00000346279 GPR153Q6NV75 609 aa12.26□□□□□ -0.45
XAGE3-201ENST00000346279 ANKRD13DQ6ZTN6 518 aa12.25□□□□□ -0.45
XAGE3-201ENST00000346279 EFCAB3Q8N7B9 438 aa12.24□□□□□ -0.45
XAGE3-201ENST00000346279 FANCD2Q9BXW9 1451 aa12.24□□□□□ -0.45
XAGE3-201ENST00000346279 TRIM41Q8WV44 630 aa12.23□□□□□ -0.45
XAGE3-201ENST00000346279 MRC2Q9UBG0 1479 aa12.21□□□□□ -0.45
XAGE3-201ENST00000346279 TMEM92Q6UXU6 159 aa12.2□□□□□ -0.46
XAGE3-201ENST00000346279 DNAJC5Q9H3Z4 198 aa12.2□□□□□ -0.46
XAGE3-201ENST00000346279 WDR62O43379 1518 aa12.2□□□□□ -0.46
XAGE3-201ENST00000346279 PLA2G2EQ9NZK7 142 aa12.19□□□□□ -0.46
XAGE3-201ENST00000346279 CEP164Q9UPV0 1460 aa12.19□□□□□ -0.46
XAGE3-201ENST00000346279 URB2Q14146 1524 aaKnown RBP12.17□□□□□ -0.46
XAGE3-201ENST00000346279 LSM11P83369 360 aaKnown RBP eCLIP12.16□□□□□ -0.46
XAGE3-201ENST00000346279 MICALL2Q8IY33 904 aa12.16□□□□□ -0.46
XAGE3-201ENST00000346279 PRDM2Q13029 1718 aa12.14□□□□□ -0.47
XAGE3-201ENST00000346279 SOX12O15370 315 aa12.14□□□□□ -0.47
XAGE3-201ENST00000346279 SUPT5HO00267 1087 aaKnown RBP12.13□□□□□ -0.47
XAGE3-201ENST00000346279 ARSIQ5FYB1 569 aa12.12□□□□□ -0.47
XAGE3-201ENST00000346279 ZNF316A6NFI3 1004 aaPredicted RBP12.11□□□□□ -0.47
XAGE3-201ENST00000346279 HCSTQ9UBK5 93 aa12.07□□□□□ -0.48
XAGE3-201ENST00000346279 RIOK3O14730 519 aaKnown RBP12.05□□□□□ -0.48
XAGE3-201ENST00000346279 KHSRPQ92945 711 aaKnown RBP eCLIP12.05□□□□□ -0.48
XAGE3-201ENST00000346279 TOPBP1Q92547 1522 aa12.05□□□□□ -0.48
XAGE3-201ENST00000346279 MS4A4AQ96JQ5 239 aa12.03□□□□□ -0.48
XAGE3-201ENST00000346279 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.02□□□□□ -0.49
XAGE3-201ENST00000346279 VGFO15240 615 aaPredicted RBP12.02□□□□□ -0.49
XAGE3-201ENST00000346279 ZFP91Q96JP5 570 aaPredicted RBP12.02□□□□□ -0.49
XAGE3-201ENST00000346279 PHF8Q9UPP1 1060 aa12.02□□□□□ -0.49
XAGE3-201ENST00000346279 PBX2P40425 430 aa12.01□□□□□ -0.49
XAGE3-201ENST00000346279 ZNF608Q9ULD9 1512 aaPredicted RBP12□□□□□ -0.49
XAGE3-201ENST00000346279 DNMBPQ6XZF7 1577 aa11.98□□□□□ -0.49
XAGE3-201ENST00000346279 ABCC8Q09428 1581 aa11.97□□□□□ -0.49
XAGE3-201ENST00000346279 POTEEQ6S8J3 1075 aa11.97□□□□□ -0.49
XAGE3-201ENST00000346279 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
XAGE3-201ENST00000346279 NLRP6P59044 892 aa11.95□□□□□ -0.5
XAGE3-201ENST00000346279 RNF25Q96BH1 459 aaPredicted RBP11.95□□□□□ -0.5
XAGE3-201ENST00000346279 CUX1P39880 1505 aa11.95□□□□□ -0.5
XAGE3-201ENST00000346279 TARBP1Q13395 1621 aaKnown RBP11.94□□□□□ -0.5
XAGE3-201ENST00000346279 AXIN2Q9Y2T1 843 aa11.94□□□□□ -0.5
XAGE3-201ENST00000346279 POLA1P09884 1462 aaPredicted RBP11.94□□□□□ -0.5
XAGE3-201ENST00000346279 RAD54L2Q9Y4B4 1467 aa11.93□□□□□ -0.5
XAGE3-201ENST00000346279 TAOK2Q9UL54 1235 aa11.92□□□□□ -0.5
XAGE3-201ENST00000346279 AQRO60306 1485 aaKnown RBP eCLIP11.91□□□□□ -0.5
XAGE3-201ENST00000346279 SOGA1O94964 1423 aa11.89□□□□□ -0.51
XAGE3-201ENST00000346279 FGD5Q6ZNL6 1462 aa11.89□□□□□ -0.51
XAGE3-201ENST00000346279 NUDT7P0C024 238 aa11.88□□□□□ -0.51
XAGE3-201ENST00000346279 ADGRD1Q6QNK2 874 aa11.87□□□□□ -0.51
XAGE3-201ENST00000346279 TDRD9Q8NDG6 1382 aaKnown RBP11.87□□□□□ -0.51
XAGE3-201ENST00000346279 EIF4G3O43432 1585 aaKnown RBP11.87□□□□□ -0.51
XAGE3-201ENST00000346279 LHX6Q9UPM6 363 aa11.86□□□□□ -0.51
XAGE3-201ENST00000346279 FBXO22Q8NEZ5 403 aa11.85□□□□□ -0.51
XAGE3-201ENST00000346279 BCL11BQ9C0K0 894 aaPredicted RBP11.85□□□□□ -0.51
XAGE3-201ENST00000346279 STK24Q9Y6E0 443 aa11.82□□□□□ -0.52
XAGE3-201ENST00000346279 C2orf72A6NCS6 295 aa11.81□□□□□ -0.52
XAGE3-201ENST00000346279 KIF3CO14782 793 aa11.8□□□□□ -0.52
XAGE3-201ENST00000346279 SYNJ1O43426 1573 aa11.79□□□□□ -0.52
XAGE3-201ENST00000346279 ARHGAP33O14559 1287 aa11.79□□□□□ -0.52
XAGE3-201ENST00000346279 WDR97A6NE52 1622 aa11.78□□□□□ -0.52
XAGE3-201ENST00000346279 RGS20O76081 388 aa11.78□□□□□ -0.52
XAGE3-201ENST00000346279 MFRPQ9BY79 579 aa11.78□□□□□ -0.52
XAGE3-201ENST00000346279 IRX2Q9BZI1 471 aaPredicted RBP11.78□□□□□ -0.52
XAGE3-201ENST00000346279 WRNQ14191 1432 aaPredicted RBP eCLIP11.77□□□□□ -0.52
XAGE3-201ENST00000346279 HRO43593 1189 aa11.77□□□□□ -0.53
XAGE3-201ENST00000346279 SLC34A2O95436 690 aa11.77□□□□□ -0.53
XAGE3-201ENST00000346279 PCDHGA4Q9Y5G9 962 aa11.77□□□□□ -0.53
XAGE3-201ENST00000346279 TOP2BQ02880 1626 aa11.77□□□□□ -0.53
XAGE3-201ENST00000346279 BIVM-ERCC5R4GMW8 1640 aa11.77□□□□□ -0.53
XAGE3-201ENST00000346279 ABCA10Q8WWZ4 1543 aa11.76□□□□□ -0.53
XAGE3-201ENST00000346279 TK2O00142 265 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms