RNA–Protein interactions for RNA: ENST00000345094.7

THUMPD3-201, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene THUMPD3, Length 3,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-201ENST00000345094 ERICH3Q5RHP9 1530 aa14.01□□□□□ -0.17
THUMPD3-201ENST00000345094 TCERG1O14776 1098 aaKnown RBP14□□□□□ -0.17
THUMPD3-201ENST00000345094 CHGAP10645 457 aaKnown RBP14□□□□□ -0.17
THUMPD3-201ENST00000345094 GOLGA6L2Q8N9W4 650 aaPredicted RBP14□□□□□ -0.17
THUMPD3-201ENST00000345094 CNTLNQ9NXG0 1405 aa14□□□□□ -0.17
THUMPD3-201ENST00000345094 RAD54L2Q9Y4B4 1467 aa14□□□□□ -0.17
THUMPD3-201ENST00000345094 TNNT2P45379 298 aaPredicted RBP14□□□□□ -0.17
THUMPD3-201ENST00000345094 FRAT1Q92837 279 aaPredicted RBP14□□□□□ -0.17
THUMPD3-201ENST00000345094 CDCA7LQ96GN5 454 aa13.99□□□□□ -0.17
THUMPD3-201ENST00000345094 RRP1P56182 461 aaKnown RBP13.99□□□□□ -0.17
THUMPD3-201ENST00000345094 SLKQ9H2G2 1235 aaPredicted RBP13.99□□□□□ -0.17
THUMPD3-201ENST00000345094 CUX1P39880 1505 aa13.99□□□□□ -0.17
THUMPD3-201ENST00000345094 TOP2BQ02880 1626 aa13.98□□□□□ -0.17
THUMPD3-201ENST00000345094 FGD5Q6ZNL6 1462 aa13.98□□□□□ -0.17
THUMPD3-201ENST00000345094 TIAM1Q13009 1591 aa13.97□□□□□ -0.17
THUMPD3-201ENST00000345094 CRBNQ96SW2 442 aa13.97□□□□□ -0.17
THUMPD3-201ENST00000345094 UPF2Q9HAU5 1272 aaKnown RBP13.97□□□□□ -0.17
THUMPD3-201ENST00000345094 KNSTRNQ9Y448 316 aa13.96□□□□□ -0.17
THUMPD3-201ENST00000345094 CADPSQ9ULU8 1353 aa13.96□□□□□ -0.17
THUMPD3-201ENST00000345094 CHMP7Q8WUX9 453 aaPredicted RBP13.96□□□□□ -0.18
THUMPD3-201ENST00000345094 USP47Q96K76 1375 aa13.95□□□□□ -0.18
THUMPD3-201ENST00000345094 BRPF3Q9ULD4 1205 aa13.94□□□□□ -0.18
THUMPD3-201ENST00000345094 PLEKHD1A6NEE1 506 aa13.94□□□□□ -0.18
THUMPD3-201ENST00000345094 CCDC146Q8IYE0 955 aa13.94□□□□□ -0.18
THUMPD3-201ENST00000345094 NUP155O75694 1391 aa13.93□□□□□ -0.18
THUMPD3-201ENST00000345094 HSP90AA1P07900 732 aaKnown RBP13.93□□□□□ -0.18
THUMPD3-201ENST00000345094 CFTRP13569 1480 aa13.93□□□□□ -0.18
THUMPD3-201ENST00000345094 GZF1Q9H116 711 aaPredicted RBP13.92□□□□□ -0.18
THUMPD3-201ENST00000345094 ARID4BQ4LE39 1312 aaPredicted RBP13.91□□□□□ -0.18
THUMPD3-201ENST00000345094 MYOM3Q5VTT5 1437 aa13.9□□□□□ -0.18
THUMPD3-201ENST00000345094 ROCK2O75116 1388 aaKnown RBP13.9□□□□□ -0.18
THUMPD3-201ENST00000345094 KTN1Q86UP2 1357 aaKnown RBP13.9□□□□□ -0.18
THUMPD3-201ENST00000345094 NLRP13Q86W25 1043 aa13.9□□□□□ -0.18
THUMPD3-201ENST00000345094 NCOA2Q15596 1464 aa13.9□□□□□ -0.18
THUMPD3-201ENST00000345094 RALBP1Q15311 655 aa13.89□□□□□ -0.19
THUMPD3-201ENST00000345094 NAIPQ13075 1403 aa13.89□□□□□ -0.19
THUMPD3-201ENST00000345094 PNISRQ8TF01 805 aaKnown RBP13.88□□□□□ -0.19
THUMPD3-201ENST00000345094 MYBBP1AQ9BQG0 1328 aaKnown RBP13.88□□□□□ -0.19
THUMPD3-201ENST00000345094 GSE1Q14687 1217 aa13.87□□□□□ -0.19
THUMPD3-201ENST00000345094 HNRNPMP52272 730 aaKnown RBP eCLIP13.87□□□□□ -0.19
THUMPD3-201ENST00000345094 PANK3Q9H999 370 aa13.87□□□□□ -0.19
THUMPD3-201ENST00000345094 HFM1A2PYH4 1435 aa13.87□□□□□ -0.19
THUMPD3-201ENST00000345094 PTPRKQ15262 1439 aa13.87□□□□□ -0.19
THUMPD3-201ENST00000345094 BECN1Q14457 450 aa13.87□□□□□ -0.19
THUMPD3-201ENST00000345094 NAP1L5Q96NT1 182 aaPredicted RBP13.86□□□□□ -0.19
THUMPD3-201ENST00000345094 CASKIN1Q8WXD9 1431 aa13.86□□□□□ -0.19
THUMPD3-201ENST00000345094 AQRO60306 1485 aaKnown RBP eCLIP13.85□□□□□ -0.198e-7■■■□□ 16.1
THUMPD3-201ENST00000345094 NFKBIBQ15653 356 aa13.85□□□□□ -0.19
THUMPD3-201ENST00000345094 PRKCSHP14314 528 aaPredicted RBP13.85□□□□□ -0.19
THUMPD3-201ENST00000345094 TMF1P82094 1093 aa13.84□□□□□ -0.19
THUMPD3-201ENST00000345094 CLUAP1Q96AJ1 413 aa13.84□□□□□ -0.19
THUMPD3-201ENST00000345094 KIF15Q9NS87 1388 aa13.84□□□□□ -0.19
THUMPD3-201ENST00000345094 PCF11O94913 1555 aaKnown RBP13.83□□□□□ -0.2
THUMPD3-201ENST00000345094 FANCD2Q9BXW9 1451 aa13.82□□□□□ -0.2
THUMPD3-201ENST00000345094 BCL2L13Q9BXK5 485 aa13.82□□□□□ -0.2
THUMPD3-201ENST00000345094 BACH2Q9BYV9 841 aa13.82□□□□□ -0.2
THUMPD3-201ENST00000345094 FRAT2O75474 233 aaPredicted RBP13.81□□□□□ -0.2
THUMPD3-201ENST00000345094 BICRAQ9NZM4 1560 aa13.8□□□□□ -0.2
THUMPD3-201ENST00000345094 USP35Q9P2H5 1018 aa13.8□□□□□ -0.2
THUMPD3-201ENST00000345094 RRP7AQ9Y3A4 280 aaKnown RBP13.8□□□□□ -0.2
THUMPD3-201ENST00000345094 GOLGA2Q08379 1002 aa13.79□□□□□ -0.2
THUMPD3-201ENST00000345094 NBPF1Q3BBV0 1214 aa13.79□□□□□ -0.2
THUMPD3-201ENST00000345094 C20orf194Q5TEA3 1177 aa13.79□□□□□ -0.2
THUMPD3-201ENST00000345094 SMG6Q86US8 1419 aaKnown RBP13.78□□□□□ -0.2
THUMPD3-201ENST00000345094 PDE3BQ13370 1112 aa13.78□□□□□ -0.2
THUMPD3-201ENST00000345094 FYCO1Q9BQS8 1478 aa13.78□□□□□ -0.2
THUMPD3-201ENST00000345094 FAM161AQ3B820 660 aa13.77□□□□□ -0.21
THUMPD3-201ENST00000345094 ADAMTS8Q9UP79 889 aa13.77□□□□□ -0.21
THUMPD3-201ENST00000345094 FTSJ3Q8IY81 847 aaKnown RBP13.76□□□□□ -0.21
THUMPD3-201ENST00000345094 COG6Q9Y2V7 657 aa13.76□□□□□ -0.21
THUMPD3-201ENST00000345094 APAF1O14727 1248 aa13.76□□□□□ -0.21
THUMPD3-201ENST00000345094 NCAPD3P42695 1498 aa13.76□□□□□ -0.21
THUMPD3-201ENST00000345094 ANKRD30AQ9BXX3 1397 aa13.75□□□□□ -0.21
THUMPD3-201ENST00000345094 MS4A1P11836 297 aa13.75□□□□□ -0.21
THUMPD3-201ENST00000345094 TPRNQ4KMQ1 711 aa13.75□□□□□ -0.21
THUMPD3-201ENST00000345094 SLC24A1O60721 1099 aa13.74□□□□□ -0.21
THUMPD3-201ENST00000345094 TRIM44Q96DX7 344 aaPredicted RBP13.74□□□□□ -0.21
THUMPD3-201ENST00000345094 NCLP19338 710 aaKnown RBP13.73□□□□□ -0.21
THUMPD3-201ENST00000345094 PDS5BQ9NTI5 1447 aa13.73□□□□□ -0.21
THUMPD3-201ENST00000345094 CENPQQ7L2Z9 268 aaPredicted RBP13.73□□□□□ -0.21
THUMPD3-201ENST00000345094 UNC13AQ9UPW8 1703 aa13.72□□□□□ -0.21
THUMPD3-201ENST00000345094 NCOA1Q15788 1441 aa13.72□□□□□ -0.21
THUMPD3-201ENST00000345094 SAFB2Q14151 953 aaKnown RBP eCLIP13.72□□□□□ -0.21
THUMPD3-201ENST00000345094 MFAP1P55081 439 aaKnown RBP13.72□□□□□ -0.21
THUMPD3-201ENST00000345094 FOXD4L1Q9NU39 408 aa13.72□□□□□ -0.21
THUMPD3-201ENST00000345094 GLIPR1L2Q4G1C9 344 aa13.72□□□□□ -0.21
THUMPD3-201ENST00000345094 ANP32BQ92688 251 aaKnown RBP13.72□□□□□ -0.21
THUMPD3-201ENST00000345094 NESP48681 1621 aa13.71□□□□□ -0.21
THUMPD3-201ENST00000345094 U2SURPO15042 1029 aaKnown RBP13.71□□□□□ -0.21
THUMPD3-201ENST00000345094 PANK1Q8TE04 598 aa13.69□□□□□ -0.22
THUMPD3-201ENST00000345094 ZBTB7CA1YPR0 619 aa13.69□□□□□ -0.22
THUMPD3-201ENST00000345094 BCAR3O75815 825 aa13.69□□□□□ -0.22
THUMPD3-201ENST00000345094 ANKRD30BQ9BXX2 1392 aa13.69□□□□□ -0.22
THUMPD3-201ENST00000345094 ARID3AQ99856 593 aa13.68□□□□□ -0.22
THUMPD3-201ENST00000345094 GAPVD1Q14C86 1478 aa13.68□□□□□ -0.22
THUMPD3-201ENST00000345094 CDCA8Q53HL2 280 aa13.68□□□□□ -0.22
THUMPD3-201ENST00000345094 PTPN23Q9H3S7 1636 aa13.68□□□□□ -0.22
THUMPD3-201ENST00000345094 BRD4O60885 1362 aaPredicted RBP13.67□□□□□ -0.22
THUMPD3-201ENST00000345094 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.67□□□□□ -0.22
THUMPD3-201ENST00000345094 CDK13Q14004 1512 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms