RNA–Protein interactions for RNA: ENST00000345093.8

RNF41-201, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 5,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-201ENST00000345093 TOPBP1Q92547 1522 aa12.85□□□□□ -0.35
RNF41-201ENST00000345093 UPF2Q9HAU5 1272 aaKnown RBP12.85□□□□□ -0.35
RNF41-201ENST00000345093 FHOD3Q2V2M9 1422 aa12.85□□□□□ -0.35
RNF41-201ENST00000345093 CSB-PGBD3P0DP91 1061 aa12.85□□□□□ -0.35
RNF41-201ENST00000345093 SYNJ1O43426 1573 aa12.84□□□□□ -0.35
RNF41-201ENST00000345093 MEX3CQ5U5Q3 659 aaKnown RBP12.84□□□□□ -0.35
RNF41-201ENST00000345093 RAD54L2Q9Y4B4 1467 aa12.84□□□□□ -0.35
RNF41-201ENST00000345093 MS4A1P11836 297 aa12.84□□□□□ -0.35
RNF41-201ENST00000345093 MAGI1Q96QZ7 1491 aaPredicted RBP12.84□□□□□ -0.35
RNF41-201ENST00000345093 CCDC9Q9Y3X0 531 aaKnown RBP12.83□□□□□ -0.35
RNF41-201ENST00000345093 CUX1P39880 1505 aa12.83□□□□□ -0.35
RNF41-201ENST00000345093 PLEKHG5O94827 1062 aa12.83□□□□□ -0.36
RNF41-201ENST00000345093 FKBP8Q14318 412 aa12.83□□□□□ -0.36
RNF41-201ENST00000345093 TERF2IPQ9NYB0 399 aa12.83□□□□□ -0.36
RNF41-201ENST00000345093 CALD1Q05682 793 aaKnown RBP12.82□□□□□ -0.36
RNF41-201ENST00000345093 ERICH6BQ5W0A0 696 aa12.82□□□□□ -0.36
RNF41-201ENST00000345093 DDX10Q13206 875 aaKnown RBP12.82□□□□□ -0.36
RNF41-201ENST00000345093 IGF1RP08069 1367 aa12.81□□□□□ -0.36
RNF41-201ENST00000345093 HNRNPMP52272 730 aaKnown RBP eCLIP12.81□□□□□ -0.36
RNF41-201ENST00000345093 ARXQ96QS3 562 aa12.81□□□□□ -0.36
RNF41-201ENST00000345093 SNAPC4Q5SXM2 1469 aa12.81□□□□□ -0.36
RNF41-201ENST00000345093 PKD2Q13563 968 aa12.8□□□□□ -0.36
RNF41-201ENST00000345093 DCAF11Q8TEB1 546 aa12.8□□□□□ -0.36
RNF41-201ENST00000345093 PPM1GO15355 546 aaPredicted RBP12.79□□□□□ -0.36
RNF41-201ENST00000345093 EFCAB5A4FU69 1503 aa12.79□□□□□ -0.36
RNF41-201ENST00000345093 MYOM3Q5VTT5 1437 aa12.78□□□□□ -0.36
RNF41-201ENST00000345093 DMRT2Q9Y5R5 561 aa12.78□□□□□ -0.36
RNF41-201ENST00000345093 RTF1Q92541 710 aaKnown RBP12.78□□□□□ -0.36
RNF41-201ENST00000345093 PAK3O75914 559 aaPredicted RBP12.78□□□□□ -0.36
RNF41-201ENST00000345093 NGDNQ8NEJ9 315 aaKnown RBP12.78□□□□□ -0.36
RNF41-201ENST00000345093 HNRNPUQ00839 825 aaKnown RBP eCLIP12.77□□□□□ -0.36
RNF41-201ENST00000345093 HDAC5Q9UQL6 1122 aa12.77□□□□□ -0.36
RNF41-201ENST00000345093 BICRAQ9NZM4 1560 aa12.76□□□□□ -0.37
RNF41-201ENST00000345093 ATF3P18847 181 aa12.76□□□□□ -0.37
RNF41-201ENST00000345093 NESP48681 1621 aa12.76□□□□□ -0.37
RNF41-201ENST00000345093 MRS2Q9HD23 443 aa12.75□□□□□ -0.37
RNF41-201ENST00000345093 SENP3Q9H4L4 574 aaPredicted RBP12.75□□□□□ -0.37
RNF41-201ENST00000345093 THEMISQ8N1K5 641 aaPredicted RBP12.74□□□□□ -0.37
RNF41-201ENST00000345093 KIAA0586Q9BVV6 1533 aa12.73□□□□□ -0.37
RNF41-201ENST00000345093 GOLGA2Q08379 1002 aa12.73□□□□□ -0.37
RNF41-201ENST00000345093 STK26Q9P289 416 aa12.73□□□□□ -0.37
RNF41-201ENST00000345093 POLA1P09884 1462 aaPredicted RBP12.73□□□□□ -0.37
RNF41-201ENST00000345093 WASHC2AQ641Q2 1341 aa12.73□□□□□ -0.37
RNF41-201ENST00000345093 ARHGAP5Q13017 1502 aa12.73□□□□□ -0.37
RNF41-201ENST00000345093 MORC1Q86VD1 984 aa12.73□□□□□ -0.37
RNF41-201ENST00000345093 PRDM2Q13029 1718 aa12.72□□□□□ -0.37
RNF41-201ENST00000345093 CCDC144AA2RUR9 1427 aa12.72□□□□□ -0.37
RNF41-201ENST00000345093 TOP2BQ02880 1626 aa12.71□□□□□ -0.37
RNF41-201ENST00000345093 PEG3Q9GZU2 1588 aa12.71□□□□□ -0.37
RNF41-201ENST00000345093 BCL11AQ9H165 835 aa12.7□□□□□ -0.38
RNF41-201ENST00000345093 CASC1Q6TDU7 716 aa12.7□□□□□ -0.38
RNF41-201ENST00000345093 ROCK2O75116 1388 aaKnown RBP12.7□□□□□ -0.38
RNF41-201ENST00000345093 TEX14Q8IWB6 1497 aa12.7□□□□□ -0.38
RNF41-201ENST00000345093 FAM9BQ8IZU0 186 aa12.69□□□□□ -0.38
RNF41-201ENST00000345093 EVA1CP58658 441 aa12.69□□□□□ -0.38
RNF41-201ENST00000345093 PPP6R1Q9UPN7 881 aa12.69□□□□□ -0.38
RNF41-201ENST00000345093 PHLDB1Q86UU1 1377 aa12.69□□□□□ -0.38
RNF41-201ENST00000345093 RAB3GAP2Q9H2M9 1393 aa12.69□□□□□ -0.38
RNF41-201ENST00000345093 ABCA10Q8WWZ4 1543 aa12.68□□□□□ -0.38
RNF41-201ENST00000345093 CUL7Q14999 1698 aa12.68□□□□□ -0.38
RNF41-201ENST00000345093 MPHOSPH9Q99550 1183 aa12.68□□□□□ -0.38
RNF41-201ENST00000345093 FYCO1Q9BQS8 1478 aa12.68□□□□□ -0.38
RNF41-201ENST00000345093 DHX57Q6P158 1386 aaKnown RBP12.68□□□□□ -0.38
RNF41-201ENST00000345093 PSME1Q06323 249 aa12.68□□□□□ -0.38
RNF41-201ENST00000345093 LMOD3Q0VAK6 560 aa12.68□□□□□ -0.38
RNF41-201ENST00000345093 PHF23Q9BUL5 403 aaPredicted RBP12.68□□□□□ -0.38
RNF41-201ENST00000345093 CASKIN1Q8WXD9 1431 aa12.67□□□□□ -0.38
RNF41-201ENST00000345093 HSP90AA1P07900 732 aaKnown RBP12.67□□□□□ -0.38
RNF41-201ENST00000345093 HECW1Q76N89 1606 aa12.67□□□□□ -0.38
RNF41-201ENST00000345093 CFAP44Q96MT7 982 aa12.66□□□□□ -0.38
RNF41-201ENST00000345093 ANO8Q9HCE9 1232 aaPredicted RBP12.66□□□□□ -0.38
RNF41-201ENST00000345093 PLB1Q6P1J6 1458 aa12.66□□□□□ -0.38
RNF41-201ENST00000345093 U2SURPO15042 1029 aaKnown RBP12.65□□□□□ -0.38
RNF41-201ENST00000345093 EVC2Q86UK5 1308 aa12.65□□□□□ -0.38
RNF41-201ENST00000345093 RRBP1Q9P2E9 1410 aaKnown RBP12.65□□□□□ -0.39
RNF41-201ENST00000345093 SF3B2Q13435 895 aaKnown RBP12.64□□□□□ -0.39
RNF41-201ENST00000345093 ANKLE2Q86XL3 938 aa12.64□□□□□ -0.39
RNF41-201ENST00000345093 SUPT16HQ9Y5B9 1047 aaKnown RBP12.64□□□□□ -0.39
RNF41-201ENST00000345093 PPP4R2Q9NY27 417 aa12.64□□□□□ -0.39
RNF41-201ENST00000345093 AMPHP49418 695 aa12.63□□□□□ -0.39
RNF41-201ENST00000345093 DDRGK1Q96HY6 314 aa12.63□□□□□ -0.39
RNF41-201ENST00000345093 ANP32EQ9BTT0 268 aa12.63□□□□□ -0.39
RNF41-201ENST00000345093 FTSJ3Q8IY81 847 aaKnown RBP12.62□□□□□ -0.39
RNF41-201ENST00000345093 DNAJC5BQ9UF47 199 aa12.62□□□□□ -0.39
RNF41-201ENST00000345093 CCDC136Q96JN2 1154 aa12.62□□□□□ -0.39
RNF41-201ENST00000345093 AKNAQ7Z591 1439 aa12.62□□□□□ -0.39
RNF41-201ENST00000345093 MAP3K1Q13233 1512 aa12.61□□□□□ -0.39
RNF41-201ENST00000345093 RUSC2Q8N2Y8 1516 aa12.61□□□□□ -0.39
RNF41-201ENST00000345093 SAFB2Q14151 953 aaKnown RBP eCLIP12.61□□□□□ -0.39
RNF41-201ENST00000345093 KTN1Q86UP2 1357 aaKnown RBP12.61□□□□□ -0.39
RNF41-201ENST00000345093 CDK11BP21127 795 aaKnown RBP12.6□□□□□ -0.39
RNF41-201ENST00000345093 SLC52A1Q9NWF4 448 aa12.6□□□□□ -0.39
RNF41-201ENST00000345093 GRIN2AQ12879 1464 aa12.6□□□□□ -0.39
RNF41-201ENST00000345093 GPRASP1Q5JY77 1395 aa12.6□□□□□ -0.39
RNF41-201ENST00000345093 PRXQ9BXM0 1461 aa12.59□□□□□ -0.39
RNF41-201ENST00000345093 EHBP1L1Q8N3D4 1523 aa12.59□□□□□ -0.39
RNF41-201ENST00000345093 KIF15Q9NS87 1388 aa12.59□□□□□ -0.39
RNF41-201ENST00000345093 IQGAP2Q13576 1575 aa12.59□□□□□ -0.39
RNF41-201ENST00000345093 TROQ12816 1431 aaPredicted RBP12.59□□□□□ -0.39
RNF41-201ENST00000345093 MIA2Q96PC5 1412 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms